RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W THG1P53215 237 aaKnown RBP3.46□□□□□ -1.86
KIN28YDL108W TVP15Q03860 143 aa3.46□□□□□ -1.86
KIN28YDL108W YLR296WQ05898 108 aa3.46□□□□□ -1.86
KIN28YDL108W IRC25Q07951 179 aa3.46□□□□□ -1.86
KIN28YDL108W PAU23Q07987 124 aa3.46□□□□□ -1.86
KIN28YDL108W YOL131WQ08270 108 aa3.46□□□□□ -1.86
KIN28YDL108W PAU17Q12370 124 aa3.46□□□□□ -1.86
KIN28YDL108W MHF1Q3E835 90 aa3.46□□□□□ -1.86
KIN28YDL108W SCS22Q6Q595 175 aa3.46□□□□□ -1.86
KIN28YDL108W PEP1P32319 1579 aa3.46□□□□□ -1.86
KIN28YDL108W DOP1Q03921 1698 aa3.46□□□□□ -1.86
KIN28YDL108W COX4P04037 155 aa3.45□□□□□ -1.86
KIN28YDL108W FYV5P25585 152 aa3.45□□□□□ -1.86
KIN28YDL108W UTR5P32630 166 aa3.45□□□□□ -1.86
KIN28YDL108W TOM6P33448 61 aa3.45□□□□□ -1.86
KIN28YDL108W YHR138CP38841 114 aaPredicted RBP3.45□□□□□ -1.86
KIN28YDL108W VMA21P41806 77 aa3.45□□□□□ -1.86
KIN28YDL108W GIS2P53849 153 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
KIN28YDL108W API2Q04413 109 aa3.45□□□□□ -1.86
KIN28YDL108W SOM1Q05676 74 aa3.45□□□□□ -1.86
KIN28YDL108W SUS1Q6WNK7 96 aa3.45□□□□□ -1.86
KIN28YDL108W FZF1P32805 299 aa3.44□□□□□ -1.86
KIN28YDL108W TVP23P38962 199 aa3.44□□□□□ -1.86
KIN28YDL108W ASP1P38986 381 aaPredicted RBP3.44□□□□□ -1.86
KIN28YDL108W YNL217WP40152 326 aa3.44□□□□□ -1.86
KIN28YDL108W MZM1Q03429 123 aaPredicted RBP3.44□□□□□ -1.86
KIN28YDL108W YDR119W-AQ2V2P9 66 aa3.44□□□□□ -1.86
KIN28YDL108W YLR363W-AQ3E747 85 aa3.44□□□□□ -1.86
KIN28YDL108W SPT6P23615 1451 aaKnown RBP3.43□□□□□ -1.86
KIN28YDL108W MAK31P23059 88 aa3.43□□□□□ -1.86
KIN28YDL108W YHR125WP38831 101 aa3.43□□□□□ -1.86
KIN28YDL108W MSB2P32334 1306 aa3.43□□□□□ -1.86
KIN28YDL108W YHR213WP0CI67 198 aa3.42□□□□□ -1.86
KIN28YDL108W YHL005CP38752 130 aa3.42□□□□□ -1.86
KIN28YDL108W YER187WP40102 141 aa3.42□□□□□ -1.86
KIN28YDL108W POP3P53833 195 aaPredicted RBP3.42□□□□□ -1.86
KIN28YDL108W IGO1P53897 168 aa3.42□□□□□ -1.86
KIN28YDL108W NMA1Q06178 401 aaKnown RBP3.42□□□□□ -1.86
KIN28YDL108W EMC6Q12431 108 aa3.42□□□□□ -1.86
KIN28YDL108W RRP5Q05022 1729 aaKnown RBP3.41□□□□□ -1.86
KIN28YDL108W ECM29P38737 1868 aa3.41□□□□□ -1.86
KIN28YDL108W MLP1Q02455 1875 aaKnown RBP3.41□□□□□ -1.86
KIN28YDL108W MDM35O60200 86 aa3.41□□□□□ -1.86
KIN28YDL108W PAU21P0CE86 164 aa3.41□□□□□ -1.86
KIN28YDL108W PAU22P0CE87 164 aa3.41□□□□□ -1.86
KIN28YDL108W ECM34P38728 170 aa3.41□□□□□ -1.86
KIN28YDL108W AVO2Q04749 426 aa3.41□□□□□ -1.86
KIN28YDL108W YOR015WQ12169 119 aa3.41□□□□□ -1.86
KIN28YDL108W RPS25AQ3E792 108 aaPredicted RBP3.41□□□□□ -1.86
KIN28YDL108W RRT15Q3E811 62 aa3.41□□□□□ -1.86
KIN28YDL108W YNR034W-AQ3E841 98 aa3.41□□□□□ -1.86
KIN28YDL108W ECO1P43605 281 aa3.4□□□□□ -1.87
KIN28YDL108W VMA9Q3E7B6 73 aa3.4□□□□□ -1.87
KIN28YDL108W GDB1Q06625 1536 aa3.39□□□□□ -1.87
KIN28YDL108W LAA1P39526 2014 aa3.39□□□□□ -1.87
KIN28YDL108W RPL22AP05749 121 aaKnown RBP3.39□□□□□ -1.87
KIN28YDL108W HSP26P15992 214 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
KIN28YDL108W RPB7P34087 171 aa3.39□□□□□ -1.87
KIN28YDL108W ATX1P38636 73 aa3.39□□□□□ -1.87
KIN28YDL108W IGD1P43598 195 aa3.39□□□□□ -1.87
KIN28YDL108W CYT2Q00873 224 aa3.39□□□□□ -1.87
KIN28YDL108W DAD1Q12248 94 aa3.39□□□□□ -1.87
KIN28YDL108W PCC1Q3E833 88 aa3.39□□□□□ -1.87
KIN28YDL108W YIL134C-AQ45U18 67 aa3.39□□□□□ -1.87
KIN28YDL108W BCK1Q01389 1478 aa3.39□□□□□ -1.87
KIN28YDL108W PDR5P33302 1511 aaKnown RBP3.39□□□□□ -1.87
KIN28YDL108W SOD1P00445 154 aaKnown RBP3.38□□□□□ -1.87
KIN28YDL108W RSM18P40033 138 aa3.38□□□□□ -1.87
KIN28YDL108W MPC3P53311 146 aa3.38□□□□□ -1.87
KIN28YDL108W PIR1Q03178 341 aa3.38□□□□□ -1.87
KIN28YDL108W ECM19Q06011 112 aa3.38□□□□□ -1.87
KIN28YDL108W YPL261CQ08976 102 aa3.38□□□□□ -1.87
KIN28YDL108W YOR381W-AQ3E804 55 aa3.38□□□□□ -1.87
KIN28YDL108W VTH1P40438 1549 aa3.38□□□□□ -1.87
KIN28YDL108W VTH2P40890 1549 aa3.38□□□□□ -1.87
KIN28YDL108W FLO11P08640 1367 aa3.38□□□□□ -1.87
KIN28YDL108W MLP2P40457 1679 aa3.37□□□□□ -1.87
KIN28YDL108W YHR032W-AP0C5N6 59 aa3.37□□□□□ -1.87
KIN28YDL108W MET31Q03081 177 aa3.37□□□□□ -1.87
KIN28YDL108W IRC19Q07843 230 aa3.37□□□□□ -1.87
KIN28YDL108W IRC23Q08416 157 aa3.37□□□□□ -1.87
KIN28YDL108W ATG8P38182 117 aaRIP-Chip data3.36□□□□□ -1.87not detected
KIN28YDL108W RRT13P40042 185 aa3.36□□□□□ -1.87
KIN28YDL108W YNL198CP40166 100 aa3.36□□□□□ -1.87
KIN28YDL108W ICY1Q04329 127 aa3.36□□□□□ -1.87
KIN28YDL108W DNF1P32660 1571 aa3.35□□□□□ -1.87
KIN28YDL108W YEL067CP39978 195 aa3.35□□□□□ -1.87
KIN28YDL108W MIC27P50945 234 aa3.35□□□□□ -1.87
KIN28YDL108W BRP1P53194 125 aa3.35□□□□□ -1.87
KIN28YDL108W RPL22BP56628 122 aaKnown RBP3.35□□□□□ -1.87
KIN28YDL108W COX12Q01519 83 aa3.35□□□□□ -1.87
KIN28YDL108W YML079WQ03629 201 aa3.35□□□□□ -1.87
KIN28YDL108W YDL241WQ07738 123 aa3.35□□□□□ -1.87
KIN28YDL108W YFL041W-AQ3E817 63 aa3.35□□□□□ -1.87
KIN28YDL108W OST5Q92316 86 aa3.35□□□□□ -1.87
KIN28YDL108W GSC2P40989 1895 aa3.35□□□□□ -1.87
KIN28YDL108W TY3B-GQ99315 1547 aa3.34□□□□□ -1.87
KIN28YDL108W SPO14P36126 1683 aa3.34□□□□□ -1.87
KIN28YDL108W USO1P25386 1790 aa3.34□□□□□ -1.87
KIN28YDL108W YJL197C-AP0C5P0 93 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms