RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C SRP102P36057 244 aaPredicted RBP1.38□□□□□ -2.19
SHG1YBR258C GPI14P47088 403 aaKnown RBP1.38□□□□□ -2.19
SHG1YBR258C SNO1Q03144 224 aa1.38□□□□□ -2.19
SHG1YBR258C FIT2Q08906 153 aa1.38□□□□□ -2.19
SHG1YBR258C YOR289WQ12012 251 aaPredicted RBP1.38□□□□□ -2.19
SHG1YBR258C YLR053CQ12026 108 aa1.38□□□□□ -2.19
SHG1YBR258C DGK1Q12382 290 aa1.38□□□□□ -2.19
SHG1YBR258C YOS1Q3E834 85 aa1.38□□□□□ -2.19
SHG1YBR258C NVJ1P38881 321 aa1.37□□□□□ -2.19
SHG1YBR258C YEL067CP39978 195 aa1.37□□□□□ -2.19
SHG1YBR258C TOM7P53507 60 aa1.37□□□□□ -2.19
SHG1YBR258C SHH4Q06236 168 aa1.37□□□□□ -2.19
SHG1YBR258C SPC3Q12133 184 aa1.37□□□□□ -2.19
SHG1YBR258C YOR015WQ12169 119 aa1.37□□□□□ -2.19
SHG1YBR258C ATP20Q12233 115 aa1.37□□□□□ -2.19
SHG1YBR258C YLR307C-AQ3E825 87 aa1.37□□□□□ -2.19
SHG1YBR258C NSA2P40078 261 aaKnown RBP1.36□□□□□ -2.19
SHG1YBR258C RFC2P40348 353 aa1.36□□□□□ -2.19
SHG1YBR258C POG1P40473 351 aa1.36□□□□□ -2.19
SHG1YBR258C LCL1Q02786 101 aa1.36□□□□□ -2.19
SHG1YBR258C CMC4Q3E7A9 73 aa1.36□□□□□ -2.19
SHG1YBR258C YCR023CP25351 611 aa1.35□□□□□ -2.19
SHG1YBR258C TRR1P29509 319 aaKnown RBP1.35□□□□□ -2.19
SHG1YBR258C GSP2P32836 220 aaKnown RBP1.35□□□□□ -2.19
SHG1YBR258C EGD2P38879 174 aaKnown RBP1.35□□□□□ -2.19
SHG1YBR258C YEL008WP40001 126 aa1.35□□□□□ -2.19
SHG1YBR258C PST2Q12335 198 aaKnown RBP1.35□□□□□ -2.19
SHG1YBR258C YOR011W-AQ3E807 68 aa1.35□□□□□ -2.19
SHG1YBR258C ADK1P07170 222 aaKnown RBP1.34□□□□□ -2.19
SHG1YBR258C HYP2P23301 157 aaKnown RBP1.34□□□□□ -2.19
SHG1YBR258C RRT1P38192 103 aa1.34□□□□□ -2.19
SHG1YBR258C FYV4P38783 130 aaPredicted RBP1.34□□□□□ -2.19
SHG1YBR258C YGL101WP53144 215 aa1.34□□□□□ -2.19
SHG1YBR258C HUT1Q12520 339 aa1.34□□□□□ -2.19
SHG1YBR258C YOR192C-CQ3E736 78 aa1.34□□□□□ -2.19
SHG1YBR258C NUF2P33895 451 aa1.33□□□□□ -2.2
SHG1YBR258C SEC72P39742 193 aaKnown RBP1.33□□□□□ -2.2
SHG1YBR258C MPM1P40364 252 aa1.33□□□□□ -2.2
SHG1YBR258C UPS3Q04006 179 aa1.33□□□□□ -2.2
SHG1YBR258C RRP17Q04031 235 aaPredicted RBP1.33□□□□□ -2.2
SHG1YBR258C GAL83Q04739 417 aa1.33□□□□□ -2.2
SHG1YBR258C YPD1Q07688 167 aa1.33□□□□□ -2.2
SHG1YBR258C COA3Q3E7B2 85 aa1.33□□□□□ -2.2
SHG1YBR258C YOR381W-AQ3E804 55 aa1.33□□□□□ -2.2
SHG1YBR258C RRT15Q3E811 62 aa1.33□□□□□ -2.2
SHG1YBR258C UBC8P28263 218 aa1.32□□□□□ -2.2
SHG1YBR258C IPT1P38954 527 aa1.32□□□□□ -2.2
SHG1YBR258C NSE4P43124 402 aa1.32□□□□□ -2.2
SHG1YBR258C YGR025WP53216 100 aa1.32□□□□□ -2.2
SHG1YBR258C YOL118CQ08259 102 aa1.32□□□□□ -2.2
SHG1YBR258C YLL066W-BQ8TGJ7 56 aa1.32□□□□□ -2.2
SHG1YBR258C SNU13P39990 126 aaKnown RBP1.31□□□□□ -2.2
SHG1YBR258C SMX2P40204 77 aaKnown RBP1.31□□□□□ -2.2
SHG1YBR258C YIP3P53633 176 aa1.31□□□□□ -2.2
SHG1YBR258C YMR007WQ03675 126 aa1.31□□□□□ -2.2
SHG1YBR258C FYV12Q08559 129 aa1.31□□□□□ -2.2
SHG1YBR258C YLR050CQ12155 161 aaKnown RBP1.31□□□□□ -2.2
SHG1YBR258C YBL010CP32788 280 aa1.3□□□□□ -2.2
SHG1YBR258C FIT1Q04433 528 aa1.3□□□□□ -2.2
SHG1YBR258C RPS11AP0CX47 156 aaKnown RBP1.29□□□□□ -2.2
SHG1YBR258C RPS11BP0CX48 156 aaKnown RBP1.29□□□□□ -2.2
SHG1YBR258C YBR242WP38331 238 aa1.29□□□□□ -2.2
SHG1YBR258C YPT31P38555 223 aaKnown RBP1.29□□□□□ -2.2
SHG1YBR258C RPS20P38701 121 aaKnown RBP1.29□□□□□ -2.2
SHG1YBR258C RPS29AP41057 56 aaKnown RBP1.29□□□□□ -2.2
SHG1YBR258C YJR015WP47090 510 aa1.29□□□□□ -2.2
SHG1YBR258C NQM1P53228 333 aaPredicted RBP1.29□□□□□ -2.2
SHG1YBR258C RTC6O14464 93 aa1.28□□□□□ -2.2
SHG1YBR258C CCS1P40202 249 aaKnown RBP1.28□□□□□ -2.2
SHG1YBR258C SPC1P46965 94 aa1.28□□□□□ -2.2
SHG1YBR258C SBH1P52870 82 aa1.28□□□□□ -2.2
SHG1YBR258C GRX5Q02784 150 aa1.28□□□□□ -2.2
SHG1YBR258C YPR203WQ08994 102 aa1.28□□□□□ -2.2
SHG1YBR258C ATG41Q12048 136 aa1.28□□□□□ -2.2
SHG1YBR258C YCR101CP25607 182 aa1.27□□□□□ -2.21
SHG1YBR258C BUD23P25627 275 aaPredicted RBP1.27□□□□□ -2.21
SHG1YBR258C DLS1P40366 167 aa1.27□□□□□ -2.21
SHG1YBR258C LST8P41318 303 aa1.27□□□□□ -2.21
SHG1YBR258C VPS28Q02767 242 aa1.27□□□□□ -2.21
SHG1YBR258C COA4Q05809 96 aa1.27□□□□□ -2.21
SHG1YBR258C NSL1Q12143 216 aa1.27□□□□□ -2.21
SHG1YBR258C SRP14P38985 146 aa1.26□□□□□ -2.21
SHG1YBR258C PLP1Q04004 230 aa1.26□□□□□ -2.21
SHG1YBR258C ELP6Q04868 273 aa1.26□□□□□ -2.21
SHG1YBR258C YBR032WP38223 100 aa1.25□□□□□ -2.21
SHG1YBR258C POR2P40478 281 aa1.25□□□□□ -2.21
SHG1YBR258C GIM5Q04493 163 aa1.25□□□□□ -2.21
SHG1YBR258C SNF11P38956 169 aa1.24□□□□□ -2.21
SHG1YBR258C GPI2P46961 280 aa1.24□□□□□ -2.21
SHG1YBR258C RPL37BP51402 88 aaKnown RBP1.24□□□□□ -2.21
SHG1YBR258C YGL149WP53116 101 aa1.24□□□□□ -2.21
SHG1YBR258C YCR075W-AQ3E830 75 aa1.24□□□□□ -2.21
SHG1YBR258C PDX3P38075 228 aaKnown RBP1.23□□□□□ -2.21
SHG1YBR258C GNA1P43577 159 aaPredicted RBP1.23□□□□□ -2.21
SHG1YBR258C RPL37AP49166 88 aaKnown RBP1.23□□□□□ -2.21
SHG1YBR258C THI74Q04083 370 aa1.23□□□□□ -2.21
SHG1YBR258C RAD6P06104 172 aa1.22□□□□□ -2.21
SHG1YBR258C AHT1P29589 182 aa1.22□□□□□ -2.21
SHG1YBR258C CSH1P38287 376 aa1.22□□□□□ -2.21
SHG1YBR258C HUA1P40325 198 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms