RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C MGR2Q02889 113 aa5.41□□□□□ -1.54
TDP1YBR223C YMR103CQ04436 120 aa5.41□□□□□ -1.54
TDP1YBR223C YBL029C-AQ3E756 94 aa5.41□□□□□ -1.54
TDP1YBR223C SAL1D6W196 494 aa5.41□□□□□ -1.54
TDP1YBR223C PFY1P07274 126 aa5.41□□□□□ -1.54
TDP1YBR223C YGR025WP53216 100 aa5.41□□□□□ -1.54
TDP1YBR223C YML122CQ03207 126 aa5.41□□□□□ -1.54
TDP1YBR223C YMR317WQ04893 1140 aa5.41□□□□□ -1.54
TDP1YBR223C MBF1O14467 151 aaKnown RBP5.4□□□□□ -1.55
TDP1YBR223C AQY1P0CD91 305 aa5.4□□□□□ -1.55
TDP1YBR223C PCL2P25693 308 aa5.4□□□□□ -1.55
TDP1YBR223C SPI1P40092 148 aa5.4□□□□□ -1.55
TDP1YBR223C MRPL49P40858 161 aaPredicted RBP5.4□□□□□ -1.55
TDP1YBR223C DGA1Q08650 418 aa5.4□□□□□ -1.55
TDP1YBR223C AGA1P32323 725 aa5.39□□□□□ -1.55
TDP1YBR223C KTI12P34253 313 aaKnown RBP5.39□□□□□ -1.55
TDP1YBR223C YNL092WP53934 400 aa5.39□□□□□ -1.55
TDP1YBR223C FCF1Q05498 189 aaPredicted RBP5.39□□□□□ -1.55
TDP1YBR223C IZH3Q07959 543 aa5.39□□□□□ -1.55
TDP1YBR223C HMRA2P0CY13 119 aa5.38□□□□□ -1.55
TDP1YBR223C ELF1P36053 145 aa5.38□□□□□ -1.55
TDP1YBR223C MST28P39552 234 aa5.38□□□□□ -1.55
TDP1YBR223C YNL194CP40169 301 aa5.38□□□□□ -1.55
TDP1YBR223C YPL073CP40323 161 aa5.38□□□□□ -1.55
TDP1YBR223C KEG1P43614 200 aa5.38□□□□□ -1.55
TDP1YBR223C TOS8P53147 276 aa5.38□□□□□ -1.55
TDP1YBR223C INO2P26798 304 aa5.37□□□□□ -1.55
TDP1YBR223C YLR112WQ12130 139 aa5.37□□□□□ -1.55
TDP1YBR223C ANB1P19211 157 aa5.37□□□□□ -1.55
TDP1YBR223C YHR022CP38763 256 aa5.37□□□□□ -1.55
TDP1YBR223C VPS55P47111 140 aa5.37□□□□□ -1.55
TDP1YBR223C TOS6P48560 102 aa5.37□□□□□ -1.55
TDP1YBR223C YIP3P53633 176 aa5.37□□□□□ -1.55
TDP1YBR223C PRM7Q12459 698 aa5.37□□□□□ -1.55
TDP1YBR223C PRY2P36110 329 aa5.36□□□□□ -1.55
TDP1YBR223C GLO1P50107 326 aa5.36□□□□□ -1.55
TDP1YBR223C HOR7Q05827 59 aa5.36□□□□□ -1.55
TDP1YBR223C YOR011W-AQ3E807 68 aa5.36□□□□□ -1.55
TDP1YBR223C YOL085CQ99345 113 aa5.36□□□□□ -1.55
TDP1YBR223C Q0297Q9ZZV8 51 aa5.36□□□□□ -1.55
TDP1YBR223C BPH1P25356 2167 aa5.35□□□□□ -1.55
TDP1YBR223C ADH2P00331 348 aaKnown RBP5.35□□□□□ -1.55
TDP1YBR223C RPL42AP0CX27 106 aaKnown RBP5.35□□□□□ -1.55
TDP1YBR223C RPL42BP0CX28 106 aaKnown RBP5.35□□□□□ -1.55
TDP1YBR223C YKL070WP36087 169 aa5.35□□□□□ -1.55
TDP1YBR223C DUO1P53168 247 aaKnown RBP5.35□□□□□ -1.55
TDP1YBR223C ELC1Q03071 99 aa5.35□□□□□ -1.55
TDP1YBR223C SPG4Q04438 115 aa5.35□□□□□ -1.55
TDP1YBR223C RRG8Q06109 277 aa5.35□□□□□ -1.55
TDP1YBR223C YPL261CQ08976 102 aa5.35□□□□□ -1.55
TDP1YBR223C CCW12Q12127 133 aa5.35□□□□□ -1.55
TDP1YBR223C YPR013CQ12145 317 aa5.35□□□□□ -1.55
TDP1YBR223C PAI3P01094 68 aa5.34□□□□□ -1.55
TDP1YBR223C RPL32P38061 130 aaKnown RBP5.34□□□□□ -1.55
TDP1YBR223C CAX4P53223 239 aa5.34□□□□□ -1.55
TDP1YBR223C SRL1Q08673 210 aa5.34□□□□□ -1.55
TDP1YBR223C DFM1Q12743 341 aaKnown RBP5.34□□□□□ -1.55
TDP1YBR223C YIL102C-AQ2V2P5 75 aa5.34□□□□□ -1.55
TDP1YBR223C COA3Q3E7B2 85 aa5.34□□□□□ -1.55
TDP1YBR223C YNL198CP40166 100 aa5.34□□□□□ -1.56
TDP1YBR223C NUP42P49686 430 aaKnown RBP5.34□□□□□ -1.56
TDP1YBR223C YBR200W-AQ3E755 54 aa5.34□□□□□ -1.56
TDP1YBR223C YOR008C-AQ3E7B9 74 aa5.34□□□□□ -1.56
TDP1YBR223C YNL146C-AQ3E7Z1 64 aa5.34□□□□□ -1.56
TDP1YBR223C AIM29P36154 155 aa5.33□□□□□ -1.56
TDP1YBR223C URM1P40554 99 aaPredicted RBP5.33□□□□□ -1.56
TDP1YBR223C RUB1Q03919 77 aa5.33□□□□□ -1.56
TDP1YBR223C YIL002W-AQ3E7Z5 69 aa5.33□□□□□ -1.56
TDP1YBR223C YPR053CQ6Q5F3 151 aa5.33□□□□□ -1.56
TDP1YBR223C VAR1P02381 398 aa5.32□□□□□ -1.56
TDP1YBR223C YER135CP40082 130 aa5.32□□□□□ -1.56
TDP1YBR223C HYP2P23301 157 aaKnown RBP5.31□□□□□ -1.56
TDP1YBR223C DCV1P43595 202 aa5.31□□□□□ -1.56
TDP1YBR223C YLR296WQ05898 108 aa5.31□□□□□ -1.56
TDP1YBR223C Q0255P03881 472 aa5.3□□□□□ -1.56
TDP1YBR223C ECM33P38248 429 aaKnown RBP5.3□□□□□ -1.56
TDP1YBR223C ISU2Q12056 156 aa5.3□□□□□ -1.56
TDP1YBR223C YKL023C-AQ2V2P3 75 aa5.3□□□□□ -1.56
TDP1YBR223C TEL1P38110 2787 aa5.3□□□□□ -1.56
TDP1YBR223C RPL16BP26785 198 aaKnown RBP5.3□□□□□ -1.56
TDP1YBR223C YER181CP40097 107 aa5.3□□□□□ -1.56
TDP1YBR223C AIM34Q03673 198 aa5.3□□□□□ -1.56
TDP1YBR223C PRM3Q08931 133 aa5.3□□□□□ -1.56
TDP1YBR223C YKR041WP36134 250 aa5.29□□□□□ -1.56
TDP1YBR223C OXA1P39952 402 aa5.29□□□□□ -1.56
TDP1YBR223C SIM1P40472 476 aa5.29□□□□□ -1.56
TDP1YBR223C AIM11P87275 137 aa5.29□□□□□ -1.56
TDP1YBR223C IGO2Q9P305 131 aa5.29□□□□□ -1.56
TDP1YBR223C YDL022C-AP0C5L6 82 aa5.28□□□□□ -1.56
TDP1YBR223C YEL067CP39978 195 aa5.28□□□□□ -1.56
TDP1YBR223C YFR057WP43625 151 aa5.28□□□□□ -1.56
TDP1YBR223C YMR244WQ04018 355 aa5.28□□□□□ -1.56
TDP1YBR223C ADH1P00330 348 aaKnown RBP5.27□□□□□ -1.57
TDP1YBR223C YCR041WP37265 110 aa5.27□□□□□ -1.57
TDP1YBR223C MIG3P39943 394 aa5.27□□□□□ -1.57
TDP1YBR223C YNR077CP53758 84 aa5.27□□□□□ -1.57
TDP1YBR223C YLR042CQ07990 161 aa5.27□□□□□ -1.57
TDP1YBR223C YPL257WQ08974 193 aa5.27□□□□□ -1.57
TDP1YBR223C ATP15P21306 62 aa5.26□□□□□ -1.57
TDP1YBR223C RPB9P27999 122 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms