RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W VMA9Q3E7B6 73 aa3.52□□□□□ -1.85
PRE7YBL041W YLL066W-BQ8TGJ7 56 aa3.52□□□□□ -1.85
PRE7YBL041W ANB1P19211 157 aa3.51□□□□□ -1.85
PRE7YBL041W SRP14P38985 146 aa3.51□□□□□ -1.85
PRE7YBL041W SUR2P38992 349 aa3.51□□□□□ -1.85
PRE7YBL041W HIT1P46973 164 aa3.51□□□□□ -1.85
PRE7YBL041W YJL028WP47062 111 aa3.51□□□□□ -1.85
PRE7YBL041W ERI1P62651 68 aaKnown RBP3.51□□□□□ -1.85
PRE7YBL041W GIM5Q04493 163 aa3.51□□□□□ -1.85
PRE7YBL041W DPP1Q05521 289 aa3.51□□□□□ -1.85
PRE7YBL041W NAT3Q06504 195 aa3.51□□□□□ -1.85
PRE7YBL041W DGA1Q08650 418 aa3.51□□□□□ -1.85
PRE7YBL041W SMT3Q12306 101 aaKnown RBP3.51□□□□□ -1.85
PRE7YBL041W ATP14Q12349 124 aa3.51□□□□□ -1.85
PRE7YBL041W RTC6O14464 93 aa3.5□□□□□ -1.85
PRE7YBL041W MRPL31P14063 131 aaPredicted RBP3.5□□□□□ -1.85
PRE7YBL041W LDS1P31379 325 aa3.5□□□□□ -1.85
PRE7YBL041W KTI12P34253 313 aaKnown RBP3.5□□□□□ -1.85
PRE7YBL041W VMA7P39111 118 aa3.5□□□□□ -1.85
PRE7YBL041W DAD3P69850 94 aa3.5□□□□□ -1.85
PRE7YBL041W YCL001W-BQ96VH2 84 aa3.5□□□□□ -1.85
PRE7YBL041W SAL1D6W196 494 aa3.49□□□□□ -1.85
PRE7YBL041W RPL33AP05744 107 aaKnown RBP3.49□□□□□ -1.85
PRE7YBL041W QRI5P32344 111 aa3.49□□□□□ -1.85
PRE7YBL041W YHR140WP38842 239 aa3.49□□□□□ -1.85
PRE7YBL041W RPB11P38902 120 aa3.49□□□□□ -1.85
PRE7YBL041W TEM1P38987 245 aa3.49□□□□□ -1.85
PRE7YBL041W CDC40P40968 455 aaPredicted RBP3.49□□□□□ -1.85
PRE7YBL041W RPL33BP41056 107 aaKnown RBP3.49□□□□□ -1.85
PRE7YBL041W GPI19Q04082 140 aa3.49□□□□□ -1.85
PRE7YBL041W DXO1Q06349 442 aa3.49□□□□□ -1.85
PRE7YBL041W DCN1Q12395 269 aa3.49□□□□□ -1.85
PRE7YBL041W YPL229WQ99395 206 aa3.49□□□□□ -1.85
PRE7YBL041W FMP49A0A023PZB3 126 aa3.48□□□□□ -1.85
PRE7YBL041W YPR010C-AA5Z2X5 72 aa3.48□□□□□ -1.85
PRE7YBL041W RPL27AP0C2H6 136 aaKnown RBP3.48□□□□□ -1.85
PRE7YBL041W UBC5P15732 148 aa3.48□□□□□ -1.85
PRE7YBL041W BNS1P50084 137 aa3.48□□□□□ -1.85
PRE7YBL041W YGR017WP53210 297 aa3.48□□□□□ -1.85
PRE7YBL041W PMP3P87284 55 aa3.48□□□□□ -1.85
PRE7YBL041W ARC18Q05933 178 aaKnown RBP3.48□□□□□ -1.85
PRE7YBL041W LCL2Q08045 131 aa3.48□□□□□ -1.85
PRE7YBL041W CSM4Q08955 156 aa3.48□□□□□ -1.85
PRE7YBL041W YMR122W-AQ3E842 84 aa3.48□□□□□ -1.85
PRE7YBL041W HMRA1P0CY11 126 aa3.47□□□□□ -1.85
PRE7YBL041W CUP2P15315 225 aa3.47□□□□□ -1.85
PRE7YBL041W SRB6P32570 121 aa3.47□□□□□ -1.85
PRE7YBL041W MIX23P38162 196 aa3.47□□□□□ -1.85
PRE7YBL041W TVP18Q04767 167 aa3.47□□□□□ -1.85
PRE7YBL041W ZRT1P32804 376 aa3.46□□□□□ -1.86
PRE7YBL041W MRPS9P38120 278 aa3.46□□□□□ -1.86
PRE7YBL041W PAU7P39545 55 aa3.46□□□□□ -1.86
PRE7YBL041W PAU5P43575 122 aa3.46□□□□□ -1.86
PRE7YBL041W THG1P53215 237 aaKnown RBP3.46□□□□□ -1.86
PRE7YBL041W GTO3Q04806 366 aa3.46□□□□□ -1.86
PRE7YBL041W MRP49P32388 137 aa3.45□□□□□ -1.86
PRE7YBL041W HSP10P38910 106 aa3.45□□□□□ -1.86
PRE7YBL041W ARC15P40518 154 aaRIP-Chip data3.45□□□□□ -1.86not detected
PRE7YBL041W YDR115WQ04598 105 aa3.45□□□□□ -1.86
PRE7YBL041W YBR013CP38215 129 aa3.44□□□□□ -1.86
PRE7YBL041W SVP26P38869 228 aa3.44□□□□□ -1.86
PRE7YBL041W APS2Q00381 147 aa3.44□□□□□ -1.86
PRE7YBL041W SNU23Q12368 194 aaPredicted RBP3.44□□□□□ -1.86
PRE7YBL041W NHP6AP11632 93 aaKnown RBP3.43□□□□□ -1.86
PRE7YBL041W YGL010WP25338 174 aa3.43□□□□□ -1.86
PRE7YBL041W YGR149WP48236 432 aa3.43□□□□□ -1.86
PRE7YBL041W YMR320WQ04897 101 aa3.43□□□□□ -1.86
PRE7YBL041W POM33Q12164 279 aa3.43□□□□□ -1.86
PRE7YBL041W YLR118CQ12354 227 aa3.43□□□□□ -1.86
PRE7YBL041W YOP1Q12402 180 aa3.43□□□□□ -1.86
PRE7YBL041W RRT15Q3E811 62 aa3.43□□□□□ -1.86
PRE7YBL041W ADH3P07246 375 aaKnown RBP3.42□□□□□ -1.86
PRE7YBL041W NTF2P33331 125 aaKnown RBP3.42□□□□□ -1.86
PRE7YBL041W PAM17P36147 197 aa3.42□□□□□ -1.86
PRE7YBL041W ERG28P40030 148 aa3.42□□□□□ -1.86
PRE7YBL041W DCV1P43595 202 aa3.42□□□□□ -1.86
PRE7YBL041W BET5Q03630 159 aa3.42□□□□□ -1.86
PRE7YBL041W FCF1Q05498 189 aaPredicted RBP3.42□□□□□ -1.86
PRE7YBL041W YNR034W-AQ3E841 98 aa3.42□□□□□ -1.86
PRE7YBL041W YDR034C-AP0C289 58 aa3.41□□□□□ -1.86
PRE7YBL041W RPL16AP26784 199 aaKnown RBP3.41□□□□□ -1.86
PRE7YBL041W YKR032WP36127 104 aa3.41□□□□□ -1.86
PRE7YBL041W SDS23P53172 527 aa3.41□□□□□ -1.86
PRE7YBL041W YAR023CD6VPM8 179 aa3.4□□□□□ -1.87
PRE7YBL041W RPL23AP0CX41 137 aaKnown RBP3.4□□□□□ -1.87
PRE7YBL041W RPL23BP0CX42 137 aaKnown RBP3.4□□□□□ -1.87
PRE7YBL041W DAD2P36162 133 aa3.4□□□□□ -1.87
PRE7YBL041W YIL059CP40520 121 aa3.4□□□□□ -1.87
PRE7YBL041W DFM1Q12743 341 aaKnown RBP3.4□□□□□ -1.87
PRE7YBL041W YER076CP40049 302 aa3.39□□□□□ -1.87
PRE7YBL041W PAU15P40585 124 aa3.39□□□□□ -1.87
PRE7YBL041W DAN1P47178 298 aa3.39□□□□□ -1.87
PRE7YBL041W YKR070WP36151 352 aaKnown RBP3.38□□□□□ -1.87
PRE7YBL041W VMA21P41806 77 aa3.38□□□□□ -1.87
PRE7YBL041W FSF1Q12029 327 aaKnown RBP3.38□□□□□ -1.87
PRE7YBL041W PFY1P07274 126 aa3.37□□□□□ -1.87
PRE7YBL041W ATG8P38182 117 aaRIP-Chip data3.37□□□□□ -1.87not detected
PRE7YBL041W YBR209WP38311 105 aa3.37□□□□□ -1.87
PRE7YBL041W PET8P38921 284 aa3.37□□□□□ -1.87
PRE7YBL041W RPC10P40422 70 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms