RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PKMYT1Q99640 499 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 SYT15Q9BQS2 421 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
SF3B3-202ENST00000562722 SIX4Q9UIU6 781 aa13.91□□□□□ -0.18
SF3B3-202ENST00000562722 SPTBN2O15020 2390 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 C2orf78A6NCI8 922 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 ZNF233A6NK53 670 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 ATP2C2O75185 946 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 AKAP3O75969 853 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 GRIK1P39086 918 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 PDE6CP51160 858 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 USP4Q13107 963 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 CUL4AQ13619 759 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 ELF2Q15723 593 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 CXorf38Q8TB03 319 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 MYLPFQ96A32 169 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 MYRFLQ96LU7 910 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 MMS19Q96T76 1030 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 SMOC1Q9H4F8 434 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 INTS13Q9NVM9 706 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 CDH9Q9ULB4 789 aa13.9□□□□□ -0.18
SF3B3-202ENST00000562722 FRMD3A2A2Y4 597 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 GABRDO14764 452 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 KIAA0391O15091 583 aaKnown RBP13.89□□□□□ -0.19
SF3B3-202ENST00000562722 CLSTN1O94985 981 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 NFATC1O95644 943 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 APBB3O95704 486 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 PDGFRBP09619 1106 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 ZNF806P0C7X5 589 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 HDCP19113 662 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 SYT1P21579 422 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 BDNFP23560 247 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 LMO2P25791 158 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 GBP1P32455 592 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 MPLP40238 635 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 MAGEA11P43364 429 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 RAP1GAPP47736 663 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 DMC1Q14565 340 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 SURF1Q15526 300 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 MAPRE1Q15691 268 aaKnown RBP13.89□□□□□ -0.19
SF3B3-202ENST00000562722 DUOXA2Q1HG44 320 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 EML3Q32P44 896 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 SYT13Q7L8C5 426 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 CBWD2Q8IUF1 395 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 OR5B17Q8NGF7 314 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 SNX25Q9H3E2 840 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 TRPM5Q9NZQ8 1165 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 PCDHGA5Q9Y5G8 931 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 PTPRJQ12913 1337 aa13.89□□□□□ -0.19
SF3B3-202ENST00000562722 A0A087X0B3 334 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 DCLK1O15075 740 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 KRT37O76014 449 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 RHOBTB1O94844 696 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 ABL1P00519 1130 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 DLATP10515 647 aaKnown RBP13.88□□□□□ -0.19
SF3B3-202ENST00000562722 DGKEP52429 567 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 LIMK1P53667 647 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 SEC13P55735 322 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 CREB5Q02930 508 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 SLC39A14Q15043 492 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 STK38Q15208 465 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 ST3GAL2Q16842 350 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 PLK5Q496M5 336 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 STPG1Q5TH74 334 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 FAM171BQ6P995 826 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 VSTM1Q6UX27 236 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 DENND5BQ6ZUT9 1274 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 DPH6Q7L8W6 267 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 TSTD1Q8NFU3 115 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 CCDC26Q8TAB7 109 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 KBTBD7Q8WVZ9 684 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 HPS3Q969F9 1004 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 LRRC27Q9C0I9 530 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 CRTAC1Q9NQ79 661 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 VPS45Q9NRW7 570 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 RXFP3Q9NSD7 469 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 HSPBP1Q9NZL4 362 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 EHD2Q9NZN4 543 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 GCNT4Q9P109 453 aa13.88□□□□□ -0.19
SF3B3-202ENST00000562722 ZNF638Q14966 1978 aaKnown RBP13.87□□□□□ -0.19
SF3B3-202ENST00000562722 TRIM66O15016 1216 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 TNNI1P19237 187 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 WARSP23381 471 aaKnown RBP13.87□□□□□ -0.19
SF3B3-202ENST00000562722 ASIC1P78348 528 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 IFRD2Q12894 506 aaPredicted RBP13.87□□□□□ -0.19
SF3B3-202ENST00000562722 C2orf27AQ580R0 203 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 MDH1BQ5I0G3 518 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 RNF43Q68DV7 783 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 TCEAL6Q6IPX3 200 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 TTC30AQ86WT1 665 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 WDR49Q8IV35 697 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 RDH13Q8NBN7 331 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 GLIS3Q8NEA6 775 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 TCEAL3Q969E4 200 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 ZC3H10Q96K80 434 aaKnown RBP13.87□□□□□ -0.19
SF3B3-202ENST00000562722 SPATA17Q96L03 361 aa13.87□□□□□ -0.19
SF3B3-202ENST00000562722 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms