RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 A0A1W2PQ27 194 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 A0A1W2PQ64 194 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 A0A1W2PQD8 194 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 A8MXQ7 604 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 HCRTO43612 131 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 CALUO43852 315 aaPredicted RBP9.99□□□□□ -0.81
YBX3-218ENST00000546298 LILRB5O75023 590 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 RPN1P04843 607 aaKnown RBP9.99□□□□□ -0.81
YBX3-218ENST00000546298 CKMP06732 381 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 P4HA1P13674 534 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 PTPN1P18031 435 aaKnown RBP9.99□□□□□ -0.81
YBX3-218ENST00000546298 HDCP19113 662 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 TRIM21P19474 475 aaKnown RBP9.99□□□□□ -0.81
YBX3-218ENST00000546298 BDNFP23560 247 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 SOX9P48436 509 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 MYL6P60660 151 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 GRSF1Q12849 480 aaKnown RBP eCLIP9.99□□□□□ -0.81
YBX3-218ENST00000546298 KCNB1Q14721 858 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 ZNF667Q5HYK9 610 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 MDH1BQ5I0G3 518 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 DENND5BQ6ZUT9 1274 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 GPR161Q8N6U8 529 aaKnown RBP9.99□□□□□ -0.81
YBX3-218ENST00000546298 SUMF1Q8NBK3 374 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 TTC8Q8TAM2 541 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 TMC2Q8TDI7 906 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 PARD3BQ8TEW8 1205 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 ZNF516Q92618 1163 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 PCED1BQ96HM7 432 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 C8orf48Q96LL4 319 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 MRPL45Q9BRJ2 306 aaKnown RBP9.99□□□□□ -0.81
YBX3-218ENST00000546298 VRTNQ9H8Y1 702 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 DMAC2Q9NW81 257 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 TRPM5Q9NZQ8 1165 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 NCDNQ9UBB6 729 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 NXF1Q9UBU9 619 aaKnown RBP9.99□□□□□ -0.81
YBX3-218ENST00000546298 RAB23Q9ULC3 237 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 HPSEQ9Y251 543 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 FRMD4BQ9Y2L6 1034 aa9.99□□□□□ -0.81
YBX3-218ENST00000546298 RIF1Q5UIP0 2472 aaKnown RBP9.98□□□□□ -0.81
YBX3-218ENST00000546298 ZFHX2Q9C0A1 2572 aaPredicted RBP9.98□□□□□ -0.81
YBX3-218ENST00000546298 FAM237AA0A1B0GTK4 181 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 IKBKBO14920 756 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 ATG13O75143 517 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 PAPSS2O95340 614 aaPredicted RBP9.98□□□□□ -0.81
YBX3-218ENST00000546298 NR3C1P04150 777 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 RPL13P26373 211 aaKnown RBP9.98□□□□□ -0.81
YBX3-218ENST00000546298 IFNAR2P48551 515 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 CLDN10P78369 228 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 FOXK2Q01167 660 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 TNK2Q07912 1038 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 NR1H3Q13133 447 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 NCOA4Q13772 614 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 MTF1Q14872 753 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 PON2Q15165 354 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 SGSM1Q2NKQ1 1148 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 ZNF699Q32M78 642 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 TDRD10Q5VZ19 366 aaKnown RBP9.98□□□□□ -0.81
YBX3-218ENST00000546298 TXNDC11Q6PKC3 985 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 TSSK4Q6SA08 328 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 CPA6Q8N4T0 437 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 KIAA0895Q8NCT3 520 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 CCDC26Q8TAB7 109 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 TAF4BQ92750 862 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 TNIP3Q96KP6 325 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 ELOVL4Q9GZR5 314 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 XYLT2Q9H1B5 865 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 EPC1Q9H2F5 836 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 KCTD10Q9H3F6 313 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 EBF3Q9H4W6 596 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 DUS2Q9NX74 493 aaKnown RBP9.98□□□□□ -0.81
YBX3-218ENST00000546298 TRAF3IP3Q9Y228 551 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 CCL26Q9Y258 94 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 ZDHHC9Q9Y397 364 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 ATP8B3O60423 1300 aa9.98□□□□□ -0.81
YBX3-218ENST00000546298 FAM186AA6NE01 2351 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 C5orf42Q9H799 3197 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 LRRIQ3A6PVS8 624 aaPredicted RBP9.97□□□□□ -0.81
YBX3-218ENST00000546298 F8VP50 259 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 TRDMT1O14717 391 aaKnown RBP9.97□□□□□ -0.81
YBX3-218ENST00000546298 MAPK13O15264 365 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 TADA3O75528 432 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 RHOBTB3O94955 611 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 C4BPAP04003 597 aaKnown RBP9.97□□□□□ -0.81
YBX3-218ENST00000546298 TCF3P15923 654 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 HOXA6P31267 233 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 CNR2P34972 360 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 ID4P47928 161 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 CASP4P49662 377 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 NDUFA8P51970 172 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 NOP14P78316 857 aaKnown RBP9.97□□□□□ -0.81
YBX3-218ENST00000546298 BECN1Q14457 450 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 CCDC142Q17RM4 750 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 TMEM196Q5HYL7 178 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 CEP135Q66GS9 1140 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 KRBA2Q6ZNG9 492 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 KIAA1958Q8N8K9 716 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 ARL14EPQ8N8R7 260 aaPredicted RBP9.97□□□□□ -0.81
YBX3-218ENST00000546298 B3GALNT2Q8NCR0 500 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 STKLD1Q8NE28 680 aa9.97□□□□□ -0.81
YBX3-218ENST00000546298 SH3RF2Q8TEC5 729 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms