RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SH3RF2Q8TEC5 729 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 TRMT2BQ96GJ1 504 aaKnown RBP18.88■□□□□ 0.61
PVT1-220ENST00000524165 SLC22A12Q96S37 553 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 TSPAN18Q96SJ8 248 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 KMT5AQ9NQR1 393 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 TOR4AQ9NXH8 423 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 ABI2Q9NYB9 513 aaPredicted RBP18.88■□□□□ 0.61
PVT1-220ENST00000524165 MAGED2Q9UNF1 606 aaPredicted RBP18.88■□□□□ 0.61
PVT1-220ENST00000524165 MYOFQ9NZM1 2061 aa18.88■□□□□ 0.61
PVT1-220ENST00000524165 MUC22E2RYF6 1773 aaPredicted RBP18.87■□□□□ 0.61
PVT1-220ENST00000524165 E9PAM4 449 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 PPEF2O14830 753 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 ADAM23O75077 832 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 CLTAP09496 248 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 KRT2P35908 639 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 EIF2DP41214 584 aaKnown RBP18.87■□□□□ 0.61
PVT1-220ENST00000524165 SCRN1Q12765 414 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 BMP2KLQ5H9B9 411 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 THEM5Q8N1Q8 247 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 SPATA18Q8TC71 538 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 DCBLD2Q96PD2 775 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 PNKPQ96T60 521 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 PI4K2AQ9BTU6 479 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 BHMT2Q9H2M3 363 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 TRPC7Q9HCX4 862 aa18.87■□□□□ 0.61
PVT1-220ENST00000524165 WNT7AO00755 349 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 APODP05090 189 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 GUCY2FP51841 1108 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 PPP2R3AQ06190 1150 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 MCL1Q07820 350 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 METTL23Q86XA0 190 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 TRIML1Q8N9V2 468 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 BAHD1Q8TBE0 780 aaPredicted RBP18.86■□□□□ 0.61
PVT1-220ENST00000524165 MYRFLQ96LU7 910 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 HSPA12BQ96MM6 686 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 YTHDC1Q96MU7 727 aaKnown RBP18.86■□□□□ 0.61
PVT1-220ENST00000524165 PNMA5Q96PV4 448 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 TMEM60Q9H2L4 133 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 BRMS1Q9HCU9 246 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 GCNT4Q9P109 453 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 PCDHB5Q9Y5E4 795 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 MYH11P35749 1972 aa18.86■□□□□ 0.61
PVT1-220ENST00000524165 IGHV1OR15-9A0A0B4J2B8 117 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 CLDN3O15551 220 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 NOL4O94818 638 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 KAT7O95251 611 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 ZNF883P0CG24 379 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 GNSP15586 552 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 TNFRSF4P43489 277 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 GRIK2Q13002 908 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 STRN3Q13033 797 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 STK3Q13188 491 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 EMC10Q5UCC4 262 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 SPATA1Q5VX52 437 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 ZPBP2Q6X784 338 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 RUFY3Q7L099 469 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 SFTPA1Q8IWL2 248 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 DCP1BQ8IZD4 617 aaKnown RBP18.85■□□□□ 0.61
PVT1-220ENST00000524165 DAW1Q8N136 415 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 KIAA1958Q8N8K9 716 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 SETD7Q8WTS6 366 aaKnown RBP18.85■□□□□ 0.61
PVT1-220ENST00000524165 ZNF419Q96HQ0 510 aaPredicted RBP18.85■□□□□ 0.61
PVT1-220ENST00000524165 CDC6Q99741 560 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 C17orf75Q9HAS0 396 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 ARHGAP26Q9UNA1 814 aa18.85■□□□□ 0.61
PVT1-220ENST00000524165 ATMQ13315 3056 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 LACTBL1A8MY62 500 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 ZNF217O75362 1048 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 GABRG2P18507 467 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 ITPKBP27987 946 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 GPR15P49685 360 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 SYCP2LQ5T4T6 812 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 MARCH9Q86YJ5 346 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 ARL14EPQ8N8R7 260 aaPredicted RBP18.84■□□□□ 0.61
PVT1-220ENST00000524165 SPRYD3Q8NCJ5 442 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 STKLD1Q8NE28 680 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 DRC1Q96MC2 740 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 NTPCRQ9BSD7 190 aaKnown RBP18.84■□□□□ 0.61
PVT1-220ENST00000524165 CALCOCO1Q9P1Z2 691 aa18.84■□□□□ 0.61
PVT1-220ENST00000524165 PIRO00625 290 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 ARHGAP6O43182 974 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 PRPF40AO75400 957 aaKnown RBP18.83■□□□□ 0.6
PVT1-220ENST00000524165 CYP17A1P05093 508 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 ADRB2P07550 413 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 ATXN1LP0C7T5 689 aaKnown RBP18.83■□□□□ 0.6
PVT1-220ENST00000524165 GRIA2P42262 883 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 SLC6A11P48066 632 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 PDE6CP51160 858 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 CFHR1Q03591 330 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 MESP2Q0VG99 397 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 KCNB1Q14721 858 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 KYAT1Q16773 422 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 ZC2HC1CQ53FD0 456 aaPredicted RBP18.83■□□□□ 0.6
PVT1-220ENST00000524165 C9orf57Q5W0N0 161 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 TRMT11Q7Z4G4 463 aaKnown RBP18.83■□□□□ 0.6
PVT1-220ENST00000524165 RGL4Q8IZJ4 473 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 ADGRG2Q8IZP9 1017 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 FSIP1Q8NA03 581 aa18.83■□□□□ 0.6
PVT1-220ENST00000524165 KCNV2Q8TDN2 545 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms