RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SERPINB13Q9UIV8 391 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 ZDHHC8Q9ULC8 765 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 ZFYVE16Q7Z3T8 1539 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 NPATQ14207 1427 aa5.21□□□□□ -1.58
HMGB3P13-201ENST00000511263 BICDL2A1A5D9 508 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 ZNF185O15231 689 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 RAMP2O60895 175 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 SOAT2O75908 522 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 HKR1P10072 659 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 SKILP12757 684 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 PIK3CGP48736 1102 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 TRPC1P48995 793 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 RAB27AP51159 221 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 HK3P52790 923 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 HNRNPH2P55795 449 aaKnown RBP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 ZNF280AP59817 542 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 TPM4P67936 248 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 DPTQ07507 201 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 NOGQ13253 232 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 SMN1Q16637 294 aaKnown RBP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 ERCC6LQ2NKX8 1250 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 ATAT1Q5SQI0 421 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 FNDC7Q5VTL7 733 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 RHOUQ7L0Q8 258 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 OTUD6AQ7L8S5 288 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 CCDC186Q7Z3E2 898 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 CLNKQ7Z7G1 428 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 MRGPRGQ86SM5 289 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 IQCF2Q8IXL9 164 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 TEX11Q8IYF3 940 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 DRAXINQ8NBI3 349 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 TDRD7Q8NHU6 1098 aaKnown RBP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 CCDC26Q8TAB7 109 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 SCAMP4Q969E2 229 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 HPS3Q969F9 1004 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 RNF31Q96EP0 1072 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 COQ10AQ96MF6 247 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 VRK1Q99986 396 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 A1CFQ9NQ94 594 aaKnown RBP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 LMBRD1Q9NUN5 540 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 ZIM2Q9NZV7 527 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 TESQ9UGI8 421 aaKnown RBP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 COMMD10Q9Y6G5 202 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 VWDEQ8N2E2 1590 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 HECW2Q9P2P5 1572 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 PLA2R1Q13018 1463 aa5.2□□□□□ -1.58
HMGB3P13-201ENST00000511263 EIF2AK4Q9P2K8 1649 aaKnown RBP5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 ERICH4A6NGS2 130 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 CTIFO43310 598 aaKnown RBP5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 ORC4O43929 436 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 ERLIN1O75477 346 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 AGFG2O95081 481 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 FGFR4P22455 802 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 U2AF2P26368 475 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 RBM5P52756 815 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 CXADRP78310 365 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 HSD11B2P80365 405 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 DSC2Q02487 901 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 TAF7Q15545 349 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 CSRP2Q16527 193 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 MINDY4Q4G0A6 757 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 PREPLQ4J6C6 727 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 FLYWCH1Q4VC44 716 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 CCDC93Q567U6 631 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 METRNLQ641Q3 311 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 CLEC4GQ6UXB4 293 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 HEATR3Q7Z4Q2 680 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 KIAA1328Q86T90 577 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 SMC5Q8IY18 1101 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 GRAMD1CQ8IYS0 662 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 CHPFQ8IZ52 775 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 CAVIN3Q969G5 261 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 SMOQ99835 787 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 TRIM7Q9C029 511 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 TRIM6Q9C030 488 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 ZNF768Q9H5H4 540 aaKnown RBP5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 PNPOQ9NVS9 261 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 USP25Q9UHP3 1055 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 CTNNA3Q9UI47 895 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 HS3ST4Q9Y661 456 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 UHRF1BP1Q6BDS2 1440 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 NEURL4Q96JN8 1562 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 KIDINS220Q9ULH0 1771 aa5.19□□□□□ -1.58
HMGB3P13-201ENST00000511263 ADGBQ8N7X0 1667 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 PRDM15P57071 1507 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 KDRP35968 1356 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 PLEKHG2Q9H7P9 1386 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 INO80Q9ULG1 1556 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 PIPSLA2A3N6 862 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 E7ENX8 843 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 H3BUI4 141 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 ERC2O15083 957 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 SLC6A2P23975 617 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 RPS6KA3P51812 740 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 INHBEP58166 350 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 RPS7P62081 194 aaKnown RBP5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 POU6F2P78424 691 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 TAP2Q03519 686 aa5.18□□□□□ -1.58
HMGB3P13-201ENST00000511263 OCA2Q04671 838 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms