RNA–Protein interactions for RNA: ENST00000491086.5

RNF13-215, Transcript of ring finger protein 13, human

TSL 2

Gene RNF13, Length 1,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF13-215	ENST00000491086	THAP2	Q9H0W7	228 aa		13.72	□□□□□ -0.21
RNF13-215	ENST00000491086	LZTFL1	Q9NQ48	299 aa		13.72	□□□□□ -0.21
RNF13-215	ENST00000491086	TJP2	Q9UDY2	1190 aa		13.72	□□□□□ -0.21
RNF13-215	ENST00000491086	MTCL1	Q9Y4B5	1905 aa	Known RBP	13.72	□□□□□ -0.21
RNF13-215	ENST00000491086	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
RNF13-215	ENST00000491086		A0A0A6YYK5	440 aa	Predicted RBP	13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	FAM170A	A1A519	330 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	ARHGEF37	A1IGU5	675 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	GOLGA6L9	A6NEM1	432 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086		H3BNC9	293 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	TULP2	O00295	520 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	CCP110	O43303	1012 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	IPO7	O95373	1038 aa	Known RBP	13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	CYP1A2	P05177	515 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	LAG3	P18627	525 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	PCSK1	P29120	753 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	IRS1	P35568	1242 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	GABRB2	P47870	512 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	ALDH7A1	P49419	539 aa	Known RBP	13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	PLCB3	Q01970	1234 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	YWHAH	Q04917	246 aa	Predicted RBP	13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	GOLGA7B	Q2TAP0	167 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	PTPN20	Q4JDL3	420 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	RTP2	Q5QGT7	225 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	FAM171A1	Q5VUB5	890 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	KIAA1328	Q86T90	577 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	METTL23	Q86XA0	190 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	ANKRD52	Q8NB46	1076 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	TMEM35B	Q8NCS4	154 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	UBA3	Q8TBC4	463 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	MYCBPAP	Q8TBZ2	947 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	SLC2A14	Q8TDB8	520 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	PCED1B	Q96HM7	432 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	VCPIP1	Q96JH7	1222 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	B3GALT6	Q96L58	329 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	ZNF558	Q96NG5	402 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	CPXM1	Q96SM3	734 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	SLC4A5	Q9BY07	1137 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	ZCWPW1	Q9H0M4	648 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	SEPT11	Q9NVA2	429 aa	Known RBP	13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	GTF3C4	Q9UKN8	822 aa		13.71	□□□□□ -0.21
RNF13-215	ENST00000491086	PLXNA3	P51805	1871 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	CLDN5	O00501	218 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	BEST1	O76090	585 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	MTA2	O94776	668 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	VNN2	O95498	520 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	CACNA2D1	P54289	1103 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	HADHB	P55084	474 aa	Known RBP	13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	GSC	P56915	257 aa	Predicted RBP	13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	GPC5	P78333	572 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	TFF2	Q03403	129 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	C1QBP	Q07021	282 aa	Known RBP	13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	PDE4C	Q08493	712 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	KIF5A	Q12840	1032 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	ELAVL2	Q12926	359 aa	Known RBP	13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	C2CD6	Q53TS8	623 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	MDH1B	Q5I0G3	518 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	PMF1	Q6P1K2	205 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	LLGL2	Q6P1M3	1020 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	ZMIZ2	Q8NF64	920 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	SECISBP2L	Q93073	1101 aa	Known RBP	13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	SAMD11	Q96NU1	681 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	AVEN	Q9NQS1	362 aa	Predicted RBP	13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	COG5	Q9UP83	839 aa		13.7	□□□□□ -0.22
RNF13-215	ENST00000491086	HHLA1	C9JL84	531 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	C5orf67	F2Z3F1	127 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086		M0QYV0	167 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	KRT86	O43790	486 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	LILRB3	O75022	631 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	SOD2	P04179	222 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	SETSIP	P0DME0	302 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	ABCB4	P21439	1286 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	RRM1	P23921	792 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	PDCL	Q13371	301 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	CAMK1	Q14012	370 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	TCEAL5	Q5H9L2	206 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	PPP1R15B	Q5SWA1	713 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	PLEKHA7	Q6IQ23	1121 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	PPP1R2P3	Q6NXS1	205 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	MMS22L	Q6ZRQ5	1243 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	CLEC20A	Q6ZU45	233 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	TMEM110	Q86TL2	294 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	DDX53	Q86TM3	631 aa	Known RBP	13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	FAM35A	Q86V20	835 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	THEM5	Q8N1Q8	247 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	RNF10	Q8N5U6	811 aa	Known RBP	13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	STK32A	Q8WU08	396 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	POF1B	Q8WVV4	589 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	PIK3R5	Q8WYR1	880 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	RFFL	Q8WZ73	363 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	MRPL38	Q96DV4	380 aa	Known RBP	13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	SMO	Q99835	787 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	TTPAL	Q9BTX7	342 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	HERC2P3	Q9BVR0	1158 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	DUSP16	Q9BY84	665 aa		13.69	□□□□□ -0.22
RNF13-215	ENST00000491086	TSGA10	Q9BZW7	698 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms