RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 C4BPAP04003 597 aaKnown RBP10.85□□□□□ -0.67
SF3A3-204ENST00000462258 TRIM49P0CI25 452 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 TRIM49CP0CI26 452 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 P4HA1P13674 534 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 BDNFP23560 247 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 GNL1P36915 607 aaPredicted RBP10.85□□□□□ -0.67
SF3A3-204ENST00000462258 GRIK1P39086 918 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 ZACNQ401N2 412 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 ARHGAP29Q52LW3 1261 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 INTS8Q75QN2 995 aaKnown RBP10.85□□□□□ -0.67
SF3A3-204ENST00000462258 FRMD5Q7Z6J6 570 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 FAM186BQ8IYM0 893 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 CMTM8Q8IZV2 173 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 MAB21L3Q8N8X9 362 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 B3GALNT2Q8NCR0 500 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 ELMO3Q96BJ8 720 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 MSANTD3Q96H12 275 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 ZFYVE19Q96K21 471 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 MYRFLQ96LU7 910 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 LRRC3BQ96PB8 259 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 SLC46A2Q9BY10 475 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 ELOVL4Q9GZR5 314 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 KIF9Q9HAQ2 790 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 TRPC7Q9HCX4 862 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 NDRG2Q9UN36 371 aaKnown RBP10.85□□□□□ -0.67
SF3A3-204ENST00000462258 F5P12259 2224 aa10.85□□□□□ -0.67
SF3A3-204ENST00000462258 SOBPA7XYQ1 873 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 PROB1E7EW31 1015 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 F8VP50 259 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 NCAM2O15394 837 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 GFRA3O60609 400 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 ASS1P00966 412 aaKnown RBP10.84□□□□□ -0.67
SF3A3-204ENST00000462258 CKMP06732 381 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 FAM163BP0C2L3 166 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 KRT13P13646 458 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 PTPN1P18031 435 aaKnown RBP10.84□□□□□ -0.67
SF3A3-204ENST00000462258 RPL13P26373 211 aaKnown RBP10.84□□□□□ -0.67
SF3A3-204ENST00000462258 PSMC2P35998 433 aaKnown RBP10.84□□□□□ -0.67
SF3A3-204ENST00000462258 VAMP7P51809 220 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 KPNA1P52294 538 aaPredicted RBP10.84□□□□□ -0.67
SF3A3-204ENST00000462258 PLCB2Q00722 1185 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 EDRF1Q3B7T1 1238 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 C1orf220Q5T0J3 134 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 TXNDC8Q6A555 127 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 C1orf228Q6PIY5 440 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 DENND5BQ6ZUT9 1274 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 SV2AQ7L0J3 742 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 MON1AQ86VX9 555 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 C1orf210Q8IVY1 113 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 CELF5Q8N6W0 485 aaKnown RBP10.84□□□□□ -0.67
SF3A3-204ENST00000462258 ENGASEQ8NFI3 743 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 FAM3CQ92520 227 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 TAF4BQ92750 862 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 USP13Q92995 863 aaPredicted RBP10.84□□□□□ -0.67
SF3A3-204ENST00000462258 SPATA17Q96L03 361 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 CEP295NLQ96MC4 621 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 NELL2Q99435 816 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 IMPG2Q9BZV3 1241 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 ZNF518BQ9C0D4 1074 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 SDCBP2Q9H190 292 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 MMRN2Q9H8L6 949 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 SPATA6Q9NWH7 488 aaPredicted RBP10.84□□□□□ -0.67
SF3A3-204ENST00000462258 CCL26Q9Y258 94 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 CACNA1IQ9P0X4 2223 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 KIAA1549LQ6ZVL6 1849 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 ATP8B3O60423 1300 aa10.84□□□□□ -0.67
SF3A3-204ENST00000462258 TRAV19A0A0A6YYK7 116 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 PRR23AA6NEV1 266 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 IKBKBO14920 756 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 LAMTOR5O43504 91 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 SMC2O95347 1197 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 HLA-DRAP01903 254 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 ASPAP45381 313 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 RPS9P46781 194 aaKnown RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 SOX9P48436 509 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 GCLMP48507 274 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 CACNA2D1P54289 1103 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 MLLT6P55198 1093 aaPredicted RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 CDH8P55286 799 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 USP46P62068 366 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 NOP14P78316 857 aaKnown RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 ENPEPQ07075 957 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 USP4Q13107 963 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 ADAM9Q13443 819 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 ZNF268Q14587 947 aaPredicted RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 SGSM1Q2NKQ1 1148 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 ZNF658Q5TYW1 1059 aaPredicted RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 SPOPLQ6IQ16 392 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 FAM35AQ86V20 835 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 ZNF687Q8N1G0 1237 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 TTC8Q8TAM2 541 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 ERCC4Q92889 916 aaPredicted RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 SMARCE1Q969G3 411 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 CLDN23Q96B33 292 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 TNIP3Q96KP6 325 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 C8orf48Q96LL4 319 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 TIGD1Q96MW7 591 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 GSDMAQ96QA5 445 aa10.83□□□□□ -0.68
SF3A3-204ENST00000462258 C8orf33Q9H7E9 229 aaPredicted RBP10.83□□□□□ -0.68
SF3A3-204ENST00000462258 TDP1Q9NUW8 608 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms