RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 GIPC2Q8TF65 315 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 KCNK16Q96T55 309 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 PRKD2Q9BZL6 878 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 S1PR5Q9H228 398 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 DAAM1Q9Y4D1 1078 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 AP1G2O75843 785 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 BEST1O76090 585 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 HOXB8P17481 243 aaPredicted RBP32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 SLC47A2Q86VL8 602 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 SMARCD1Q96GM5 515 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 KIAA1257Q9ULG3 409 aa32.44■■■□□ 2.78
CSNK1E-206ENST00000413574 F8VP50 259 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 GFPT2O94808 682 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 GNA15P30679 374 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 GOLGA7BQ2TAP0 167 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 VSTM1Q6UX27 236 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 BAP1Q92560 729 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 SMOQ99835 787 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 TSPAN16Q9UKR8 245 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 ATP8B3O60423 1300 aa32.43■■■□□ 2.78
CSNK1E-206ENST00000413574 GREB1Q4ZG55 1949 aa32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 O00370 1275 aa32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 HNRNPA1P09651 372 aaKnown RBP eCLIP32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 HOXA9P31269 272 aa32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 SOX5P35711 763 aa32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 TFF2Q03403 129 aa32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 RTL10Q7L3V2 364 aa32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 HCFC1R1Q9NWW0 138 aa32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 CD207Q9UJ71 328 aa32.42■■■□□ 2.78
CSNK1E-206ENST00000413574 FAM200BP0CF97 657 aa32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 MAP3K7CLP57077 242 aa32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 TTC30AQ86WT1 665 aa32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 VSTM4Q8IW00 320 aa32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 UNC80Q8N2C7 3258 aa32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 ZMIZ2Q8NF64 920 aa32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 CMASQ8NFW8 434 aaPredicted RBP32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 CPLX3Q8WVH0 158 aa32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 SMG7Q92540 1137 aaKnown RBP32.41■■■□□ 2.78
CSNK1E-206ENST00000413574 THAP12O43422 761 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 CFHP08603 1231 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 STAT1P42224 750 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 EPHB3P54753 998 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 CLEC20AQ6ZU45 233 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 SMRP1Q8NCR6 262 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 UBA3Q8TBC4 463 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 ZNF606Q8WXB4 792 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 ADAM7Q9H2U9 754 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 COG5Q9UP83 839 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 NOTCH4Q99466 2003 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 ITIH6Q6UXX5 1313 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 ZNF75DP51815 510 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 RPL10AP62906 217 aaKnown RBP32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 ARID5AQ03989 594 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 PTK2Q05397 1052 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 MTMR3Q13615 1198 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 FIGNQ5HY92 759 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 GPR149Q86SP6 731 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 NUP58Q9BVL2 599 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 DUSP16Q9BY84 665 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 PIDD1Q9HB75 910 aa32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 WDR3Q9UNX4 943 aaKnown RBP eCLIP32.4■■■□□ 2.78
CSNK1E-206ENST00000413574 PAPLNO95428 1278 aa32.39■■■□□ 2.78
CSNK1E-206ENST00000413574 PLD1Q13393 1074 aa32.39■■■□□ 2.78
CSNK1E-206ENST00000413574 CNGA2Q16280 664 aa32.39■■■□□ 2.78
CSNK1E-206ENST00000413574 SPECC1LQ69YQ0 1117 aa32.39■■■□□ 2.78
CSNK1E-206ENST00000413574 LCLAT1Q6UWP7 414 aa32.39■■■□□ 2.78
CSNK1E-206ENST00000413574 DMAP1Q9NPF5 467 aaPredicted RBP32.39■■■□□ 2.78
CSNK1E-206ENST00000413574 PATJQ8NI35 1801 aa32.39■■■□□ 2.77
CSNK1E-206ENST00000413574 LRRC53A6NM62 1247 aa32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 XYLBO75191 536 aa32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 MICAL2O94851 1124 aa32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 GYPCP04921 128 aa32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 GRASPQ7Z6J2 395 aaPredicted RBP32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 ANKRD52Q8NB46 1076 aa32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 C8orf48Q96LL4 319 aa32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 CSNK1G1Q9HCP0 422 aa32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 DNMT3BQ9UBC3 853 aaKnown RBP32.38■■■□□ 2.77
CSNK1E-206ENST00000413574 TULP2O00295 520 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 TRIM66O15016 1216 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 CYP11B1P15538 503 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 NPR3P17342 541 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 ANXA13P27216 316 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 NTHL1P78549 312 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 ITIH3Q06033 890 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 CES5AQ6NT32 575 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 DNAJB7Q7Z6W7 309 aaPredicted RBP32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 HS6ST3Q8IZP7 471 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 ZNF512Q96ME7 567 aaPredicted RBP32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 ZNF638Q14966 1978 aaKnown RBP32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 GRXCR2A6NFK2 248 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 NOP9Q86U38 636 aaKnown RBP32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 ELMOD1Q8N336 334 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 PSMG2Q969U7 264 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 CORO1BQ9BR76 489 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 EDEM3Q9BZQ6 932 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 HESX1Q9UBX0 185 aa32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 USP15Q9Y4E8 981 aaPredicted RBP32.37■■■□□ 2.77
CSNK1E-206ENST00000413574 M0QYV0 167 aa32.36■■■□□ 2.77
CSNK1E-206ENST00000413574 BPIFB4P59827 614 aa32.36■■■□□ 2.77
CSNK1E-206ENST00000413574 PDE4CQ08493 712 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms