RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SH2D3CQ8N5H7 860 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 SPC24Q8NBT2 197 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 SH3RF2Q8TEC5 729 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 FAM120BQ96EK7 910 aaKnown RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 LRRC46Q96FV0 321 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 CEP95Q96GE4 821 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 CALML4Q96GE6 196 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 RBM18Q96H35 190 aaKnown RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 LOXL4Q96JB6 756 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 FEM1CQ96JP0 617 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 NOX5Q96PH1 765 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 C7orf25Q9BPX7 421 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 HGH1Q9BTY7 390 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 AP5M1Q9H0R1 490 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 WNT8AQ9H1J5 351 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 EPS8L2Q9H6S3 715 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 TMEM8AQ9HCN3 771 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 NECTIN3Q9NQS3 549 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 INCENPQ9NQS7 918 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 SEPT11Q9NVA2 429 aaKnown RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 POGKQ9P215 609 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 CHORDC1Q9UHD1 332 aaPredicted RBP5.44□□□□□ -1.54
GABPB1-204ENST00000396464 CYP46A1Q9Y6A2 500 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 DUSP10Q9Y6W6 482 aa5.44□□□□□ -1.54
GABPB1-204ENST00000396464 CLCA1A8K7I4 914 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 FCHO1O14526 889 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 THAP12O43422 761 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 MYO1BO43795 1136 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 DGKIO75912 1065 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 TSPAN9O75954 239 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 MT-ND5P03915 603 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 FUCA1P04066 466 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 ITGB3P05106 788 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 COL6A2P12110 1019 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 TYRP14679 529 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 FNTBP49356 437 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 MCM2P49736 904 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 ALDH3A2P51648 485 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 PPP5CP53041 499 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 POLR2FP61218 127 aaKnown RBP5.43□□□□□ -1.54
GABPB1-204ENST00000396464 KIAA2012Q0VF49 1180 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 GALNT2Q10471 571 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 BFSP1Q12934 665 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 STK4Q13043 487 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 LSAMPQ13449 338 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 SNAPC2Q13487 334 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 SPIDRQ14159 915 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 TBCEQ15813 527 aaPredicted RBP5.43□□□□□ -1.54
GABPB1-204ENST00000396464 CATSPEREQ5SY80 951 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 RRAGBQ5VZM2 374 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 ATG16L1Q676U5 607 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 RAB11FIP4Q86YS3 637 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 DCP2Q8IU60 420 aaKnown RBP5.43□□□□□ -1.54
GABPB1-204ENST00000396464 PHYKPLQ8IUZ5 450 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 OR2I1PQ8NGU4 316 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 MAML1Q92585 1016 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 NMD3Q96D46 503 aaKnown RBP5.43□□□□□ -1.54
GABPB1-204ENST00000396464 SUCLG2Q96I99 432 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 MRGPRX1Q96LB2 322 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 MMP19Q99542 508 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 PRPF18Q99633 342 aaKnown RBP5.43□□□□□ -1.54
GABPB1-204ENST00000396464 FSD1Q9BTV5 496 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 DDX23Q9BUQ8 820 aaKnown RBP5.43□□□□□ -1.54
GABPB1-204ENST00000396464 PABPC3Q9H361 631 aaKnown RBP5.43□□□□□ -1.54
GABPB1-204ENST00000396464 KCNH7Q9NS40 1196 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 CLDND1Q9NY35 253 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.43□□□□□ -1.544e-6■■■■□ 20.4
GABPB1-204ENST00000396464 ZNF215Q9UL58 517 aaPredicted RBP5.43□□□□□ -1.54
GABPB1-204ENST00000396464 PCDHA3Q9Y5H8 950 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 PIAS3Q9Y6X2 628 aa5.43□□□□□ -1.54
GABPB1-204ENST00000396464 ZNF536O15090 1300 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 NKRFO15226 690 aaKnown RBP eCLIP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 AKR1B10O60218 316 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 TSPAN3O60637 253 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 CLASP2O75122 1294 aaKnown RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 SLC22A3O75751 556 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ACTL6BO94805 426 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 NTRK1P04629 796 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ATP5BP06576 529 aaKnown RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 QDPRP09417 244 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 SRGAP2BP0DMP2 458 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 GABRB3P28472 473 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 CASQ1P31415 396 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ARL3P36405 182 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 BCL6P41182 706 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 DLX2Q07687 328 aaPredicted RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 TAF7Q15545 349 aaPredicted RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 HABP4Q5JVS0 413 aaKnown RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 SHQ1Q6PI26 577 aaKnown RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 DCLRE1AQ6PJP8 1040 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ETV3LQ6ZN32 361 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 H1FNTQ75WM6 255 aaPredicted RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 CPLX4Q7Z7G2 160 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ZC3H18Q86VM9 953 aaKnown RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 NLRP10Q86W26 655 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ZNF761Q86XN6 746 aaPredicted RBP5.42□□□□□ -1.54
GABPB1-204ENST00000396464 GATAD2AQ86YP4 633 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 ARMC8Q8IUR7 673 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 EGFL6Q8IUX8 553 aa5.42□□□□□ -1.54
GABPB1-204ENST00000396464 UNC45BQ8IWX7 931 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms