RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 RPS1BP23248 255 aaKnown RBP-2.07□□□□□ -2.74
snR55snR55 SFT2P38166 215 aa-2.07□□□□□ -2.74
snR55snR55 PHB1P40961 287 aa-2.07□□□□□ -2.74
snR55snR55 YLR296WQ05898 108 aa-2.07□□□□□ -2.74
snR55snR55 HHO1P53551 258 aa-2.08□□□□□ -2.74
snR55snR55 MRPS12P53732 153 aa-2.08□□□□□ -2.74
snR55snR55 CCW14O13547 238 aa-2.09□□□□□ -2.74
snR55snR55 RTC6O14464 93 aa-2.09□□□□□ -2.74
snR55snR55 FIG1P38224 298 aa-2.09□□□□□ -2.74
snR55snR55 RRT7Q07829 113 aa-2.09□□□□□ -2.74
snR55snR55 LDB18Q07887 179 aa-2.09□□□□□ -2.74
snR55snR55 NAT5Q08689 176 aa-2.09□□□□□ -2.74
snR55snR55 ATP14Q12349 124 aa-2.09□□□□□ -2.74
snR55snR55 TOR2P32600 2474 aaKnown RBP-2.1□□□□□ -2.75
snR55snR55 APA2P22108 325 aa-2.1□□□□□ -2.75
snR55snR55 YIL163CP40448 117 aa-2.1□□□□□ -2.75
snR55snR55 YET3Q07451 203 aa-2.1□□□□□ -2.75
snR55snR55 GTT2Q12390 233 aa-2.1□□□□□ -2.75
snR55snR55 ENV10Q99382 181 aa-2.1□□□□□ -2.75
snR55snR55 FMP27Q06179 2628 aa-2.1□□□□□ -2.75
snR55snR55 PMD1P32634 1753 aa-2.1□□□□□ -2.75
snR55snR55 RPB4P20433 221 aaPredicted RBP-2.11□□□□□ -2.75
snR55snR55 YJL218WP40892 196 aaKnown RBP-2.11□□□□□ -2.75
snR55snR55 SOM1Q05676 74 aa-2.11□□□□□ -2.75
snR55snR55 YGR240C-AQ3E786 66 aa-2.11□□□□□ -2.75
snR55snR55 URB1P34241 1764 aaKnown RBP-2.11□□□□□ -2.75
snR55snR55 TRR1P29509 319 aaKnown RBP-2.12□□□□□ -2.75
snR55snR55 YGL149WP53116 101 aa-2.12□□□□□ -2.75
snR55snR55 TMA20P89886 181 aaPredicted RBP-2.12□□□□□ -2.75
snR55snR55 TOR1P35169 2470 aa-2.12□□□□□ -2.75
snR55snR55 GCN1P33892 2672 aaKnown RBP-2.13□□□□□ -2.75
snR55snR55 AIM18P38884 321 aa-2.13□□□□□ -2.75
snR55snR55 OCA6Q12454 224 aa-2.13□□□□□ -2.75
snR55snR55 YCR108CQ3E819 63 aa-2.13□□□□□ -2.75
snR55snR55 SEC7P11075 2009 aaKnown RBP-2.13□□□□□ -2.75
snR55snR55 UBI4P0CG63 381 aaKnown RBP-2.14□□□□□ -2.75
snR55snR55 RPL30P14120 105 aaKnown RBP-2.14□□□□□ -2.75
snR55snR55 YBR016WP38216 128 aa-2.14□□□□□ -2.75
snR55snR55 YER181CP40097 107 aa-2.14□□□□□ -2.75
snR55snR55 BRP1P53194 125 aa-2.14□□□□□ -2.75
snR55snR55 LSM3P57743 89 aaKnown RBP-2.14□□□□□ -2.75
snR55snR55 YOR385WQ08909 290 aa-2.14□□□□□ -2.75
snR55snR55 FCF2Q12035 217 aaPredicted RBP-2.14□□□□□ -2.75
snR55snR55 YLR050CQ12155 161 aaKnown RBP-2.14□□□□□ -2.75
snR55snR55 CMD1P06787 147 aaKnown RBP-2.15□□□□□ -2.75
snR55snR55 DLS1P40366 167 aa-2.15□□□□□ -2.75
snR55snR55 GSP1P32835 219 aaKnown RBP-2.16□□□□□ -2.76
snR55snR55 HPA2Q06592 156 aa-2.16□□□□□ -2.76
snR55snR55 YFR009W-AP0C5M9 85 aa-2.17□□□□□ -2.76
snR55snR55 ICS3P47034 131 aa-2.17□□□□□ -2.76
snR55snR55 YKT6P36015 200 aaKnown RBP-2.18□□□□□ -2.76
snR55snR55 EFM5P53200 248 aaKnown RBP-2.18□□□□□ -2.76
snR55snR55 YPD1Q07688 167 aa-2.18□□□□□ -2.76
snR55snR55 EGD2P38879 174 aaKnown RBP-2.19□□□□□ -2.76
snR55snR55 SEC72P39742 193 aaKnown RBP-2.19□□□□□ -2.76
snR55snR55 YGR017WP53210 297 aa-2.19□□□□□ -2.76
snR55snR55 DDP1Q99321 188 aaKnown RBP-2.19□□□□□ -2.76
snR55snR55 YGR164WP53291 111 aa-2.2□□□□□ -2.76
snR55snR55 RAF1Q06891 181 aa-2.2□□□□□ -2.76
snR55snR55 SEN1Q00416 2231 aaKnown RBP-2.21□□□□□ -2.76
snR55snR55 PET20Q99373 253 aa-2.21□□□□□ -2.76
snR55snR55 YRF1-6P53819 1859 aa-2.22□□□□□ -2.77
snR55snR55 YIP3P53633 176 aa-2.23□□□□□ -2.77
snR55snR55 HAP3P13434 144 aa-2.24□□□□□ -2.77
snR55snR55 HSP12P22943 109 aaKnown RBP-2.25□□□□□ -2.77
snR55snR55 RPS1AP33442 255 aaKnown RBP-2.25□□□□□ -2.77
snR55snR55 COX23P38824 151 aa-2.25□□□□□ -2.77
snR55snR55 APQ12P40532 138 aa-2.25□□□□□ -2.77
snR55snR55 PHS1P40857 217 aa-2.25□□□□□ -2.77
snR55snR55 RPS29AP41057 56 aaKnown RBP-2.25□□□□□ -2.77
snR55snR55 YPR202WQ08993 238 aa-2.25□□□□□ -2.77
snR55snR55 RPO41P13433 1351 aaKnown RBP-2.25□□□□□ -2.77
snR55snR55 MRPL44P19956 98 aa-2.26□□□□□ -2.77
snR55snR55 CYC2P38909 366 aa-2.26□□□□□ -2.77
snR55snR55 GCV3P39726 170 aaPredicted RBP-2.26□□□□□ -2.77
snR55snR55 YGL041C-BQ3E750 60 aa-2.26□□□□□ -2.77
snR55snR55 ATP7P30902 174 aa-2.27□□□□□ -2.77
snR55snR55 CGR1P53188 120 aa-2.27□□□□□ -2.77
snR55snR55 RIM15P43565 1770 aa-2.28□□□□□ -2.77
snR55snR55 YGR201CP42936 225 aa-2.28□□□□□ -2.77
snR55snR55 LSM1P47017 172 aaKnown RBP-2.28□□□□□ -2.77
snR55snR55 RAV2Q03956 351 aa-2.28□□□□□ -2.77
snR55snR55 TIM11P81449 96 aaPredicted RBP-2.29□□□□□ -2.78
snR55snR55 RUB1Q03919 77 aa-2.29□□□□□ -2.78
snR55snR55 EFG1Q3E705 233 aaKnown RBP-2.29□□□□□ -2.78
snR55snR55 YLR255CO13574 117 aa-2.3□□□□□ -2.78
snR55snR55 RPL22AP05749 121 aaKnown RBP-2.3□□□□□ -2.78
snR55snR55 YAP3P38749 330 aa-2.3□□□□□ -2.78
snR55snR55 YNL198CP40166 100 aa-2.3□□□□□ -2.78
snR55snR55 YDR476CQ03362 224 aa-2.3□□□□□ -2.78
snR55snR55 YDR246W-AQ3E763 66 aa-2.3□□□□□ -2.78
snR55snR55 QCR10P37299 77 aa-2.31□□□□□ -2.78
snR55snR55 PRS3P38689 320 aaKnown RBP-2.31□□□□□ -2.78
snR55snR55 LSM8P47093 109 aaKnown RBP-2.31□□□□□ -2.78
snR55snR55 HKR1P41809 1802 aa-2.31□□□□□ -2.78
snR55snR55 ECM5Q03214 1411 aa-2.32□□□□□ -2.78
snR55snR55 PAU21P0CE86 164 aa-2.32□□□□□ -2.78
snR55snR55 PAU22P0CE87 164 aa-2.32□□□□□ -2.78
snR55snR55 RPL36BO14455 100 aaKnown RBP-2.33□□□□□ -2.78
snR55snR55 RPL36AP05745 100 aaPredicted RBP-2.33□□□□□ -2.78
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms