RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	FSH2	Q05015	223 aa		3.9	□□□□□ -1.79
snR19	snR19	SYM1	Q06563	197 aa		3.9	□□□□□ -1.79
snR19	snR19	PAU20	Q08322	120 aa		3.9	□□□□□ -1.79
snR19	snR19	YOR015W	Q12169	119 aa		3.9	□□□□□ -1.79
snR19	snR19	POC4	Q12245	148 aa	Predicted RBP	3.9	□□□□□ -1.79
snR19	snR19	PRP46	Q12417	451 aa	Predicted RBP	3.9	□□□□□ -1.79
snR19	snR19	PAU9	Q3E770	120 aa		3.9	□□□□□ -1.79
snR19	snR19	YER078W-A	Q3E7A2	54 aa		3.9	□□□□□ -1.79
snR19	snR19	UBA3	Q99344	299 aa		3.9	□□□□□ -1.79
snR19	snR19	ADK1	P07170	222 aa	Known RBP	3.89	□□□□□ -1.79
snR19	snR19	RPL12A	P0CX53	165 aa	Known RBP	3.89	□□□□□ -1.79
snR19	snR19	RPL12B	P0CX54	165 aa		3.89	□□□□□ -1.79
snR19	snR19	SPS18	P32572	300 aa		3.89	□□□□□ -1.79
snR19	snR19	GPX1	P36014	167 aa		3.89	□□□□□ -1.79
snR19	snR19	MRP21	P38175	177 aa		3.89	□□□□□ -1.79
snR19	snR19	ECM14	P38836	430 aa		3.89	□□□□□ -1.79
snR19	snR19	YIP5	P53108	310 aa		3.89	□□□□□ -1.79
snR19	snR19	GEP7	P53171	287 aa		3.89	□□□□□ -1.79
snR19	snR19	ALG9	P53868	555 aa	Known RBP	3.89	□□□□□ -1.79
snR19	snR19	NMA1	Q06178	401 aa	Known RBP	3.89	□□□□□ -1.79
snR19	snR19	OPI3	P05375	206 aa		3.88	□□□□□ -1.79
snR19	snR19	YLL053C	P0CD98	152 aa		3.88	□□□□□ -1.79
snR19	snR19	PHO85	P17157	305 aa		3.88	□□□□□ -1.79
snR19	snR19	YMR31	P19955	123 aa		3.88	□□□□□ -1.79
snR19	snR19	RFA3	P26755	122 aa	Known RBP	3.88	□□□□□ -1.79
snR19	snR19	RPL14A	P36105	138 aa	Known RBP	3.88	□□□□□ -1.79
snR19	snR19	YKR041W	P36134	250 aa		3.88	□□□□□ -1.79
snR19	snR19	MST28	P39552	234 aa		3.88	□□□□□ -1.79
snR19	snR19	YFR045W	P43617	309 aa		3.88	□□□□□ -1.79
snR19	snR19	YFR057W	P43625	151 aa		3.88	□□□□□ -1.79
snR19	snR19	LCB3	P47013	409 aa		3.88	□□□□□ -1.79
snR19	snR19	RIM9	Q04734	239 aa		3.88	□□□□□ -1.79
snR19	snR19	YFH1	Q07540	174 aa		3.88	□□□□□ -1.79
snR19	snR19	DFM1	Q12743	341 aa	Known RBP	3.88	□□□□□ -1.79
snR19	snR19	YKL183C-A	Q3E765	70 aa		3.88	□□□□□ -1.79
snR19	snR19	YCR024C-B	Q3E7Z8	88 aa		3.88	□□□□□ -1.79
snR19	snR19	FMP49	A0A023PZB3	126 aa		3.87	□□□□□ -1.79
snR19	snR19	YDR157W	A0A023PZE8	133 aa		3.87	□□□□□ -1.79
snR19	snR19	ECM12	O13529	151 aa		3.87	□□□□□ -1.79
snR19	snR19	YPR096C	O13587	100 aa		3.87	□□□□□ -1.79
snR19	snR19	YCR085W	P25650	117 aa		3.87	□□□□□ -1.79
snR19	snR19	KTI12	P34253	313 aa	Known RBP	3.87	□□□□□ -1.79
snR19	snR19	GLE2	P40066	365 aa		3.87	□□□□□ -1.79
snR19	snR19	YFL067W	P43537	175 aa		3.87	□□□□□ -1.79
snR19	snR19	TOS2	P50078	622 aa		3.87	□□□□□ -1.79
snR19	snR19	YNR064C	P53750	290 aa		3.87	□□□□□ -1.79
snR19	snR19	INP1	Q03694	420 aa		3.87	□□□□□ -1.79
snR19	snR19	FCF1	Q05498	189 aa	Predicted RBP	3.87	□□□□□ -1.79
snR19	snR19	FCY1	Q12178	158 aa		3.87	□□□□□ -1.79
snR19	snR19	BOL1	Q3E793	110 aa		3.87	□□□□□ -1.79
snR19	snR19	RPS22B	Q3E7Y3	130 aa	Known RBP	3.87	□□□□□ -1.79
snR19	snR19	ENV10	Q99382	181 aa		3.87	□□□□□ -1.79
snR19	snR19	MID2	P36027	376 aa		3.86	□□□□□ -1.79
snR19	snR19	PRS4	P38063	326 aa	Predicted RBP	3.86	□□□□□ -1.79
snR19	snR19	YAR068W	P39564	161 aa		3.86	□□□□□ -1.79
snR19	snR19	OST1	P41543	476 aa	Known RBP	3.86	□□□□□ -1.79
snR19	snR19	YPI1	P43587	155 aa		3.86	□□□□□ -1.79
snR19	snR19	RHO5	P53879	331 aa	Known RBP	3.86	□□□□□ -1.79
snR19	snR19	TIM18	Q08749	192 aa		3.86	□□□□□ -1.79
snR19	snR19	FIT3	Q08907	204 aa		3.86	□□□□□ -1.79
snR19	snR19	UTP23	Q12339	254 aa	Known RBP	3.86	□□□□□ -1.79
snR19	snR19	YDR119W-A	Q2V2P9	66 aa		3.86	□□□□□ -1.79
snR19	snR19	ERV1	P27882	189 aa		3.85	□□□□□ -1.79
snR19	snR19	CYB5	P40312	120 aa		3.85	□□□□□ -1.79
snR19	snR19	GON7	P46984	123 aa		3.85	□□□□□ -1.79
snR19	snR19	ARP3	P47117	449 aa	Known RBP	3.85	□□□□□ -1.79
snR19	snR19	YGR039W	P53225	103 aa		3.85	□□□□□ -1.79
snR19	snR19	YGR164W	P53291	111 aa		3.85	□□□□□ -1.79
snR19	snR19	COX12	Q01519	83 aa		3.85	□□□□□ -1.79
snR19	snR19	RPL21A	Q02753	160 aa	Known RBP	3.85	□□□□□ -1.79
snR19	snR19	SME1	Q12330	94 aa	Predicted RBP	3.85	□□□□□ -1.79
snR19	snR19	RPL21B	Q12672	160 aa	Known RBP	3.85	□□□□□ -1.79
snR19	snR19	YBL112C	Q3E7Y4	105 aa		3.85	□□□□□ -1.79
snR19	snR19	YFL041W-A	Q3E817	63 aa		3.85	□□□□□ -1.79
snR19	snR19	PBI2	P0CT04	75 aa	Known RBP	3.84	□□□□□ -1.79
snR19	snR19	MDH2	P22133	377 aa		3.84	□□□□□ -1.79
snR19	snR19	YGL010W	P25338	174 aa		3.84	□□□□□ -1.79
snR19	snR19	NHP2	P32495	156 aa	Predicted RBP	3.84	□□□□□ -1.79
snR19	snR19	SWD2	P36104	329 aa	Predicted RBP	3.84	□□□□□ -1.79
snR19	snR19	CWP2	P43497	92 aa		3.84	□□□□□ -1.79
snR19	snR19	BLM10	P43583	2143 aa		3.84	□□□□□ -1.79
snR19	snR19	GPI2	P46961	280 aa		3.84	□□□□□ -1.79
snR19	snR19	TIS11	P47977	285 aa		3.84	□□□□□ -1.79
snR19	snR19	CAX4	P53223	239 aa		3.84	□□□□□ -1.79
snR19	snR19	SDC1	Q03323	175 aa		3.84	□□□□□ -1.79
snR19	snR19	VPS71	Q03433	280 aa		3.84	□□□□□ -1.79
snR19	snR19	NAT3	Q06504	195 aa		3.84	□□□□□ -1.79
snR19	snR19	RDL2	Q08742	149 aa	Known RBP	3.84	□□□□□ -1.79
snR19	snR19	YDR029W	Q12111	104 aa		3.84	□□□□□ -1.79
snR19	snR19	YAL063C-A	Q3E791	96 aa		3.84	□□□□□ -1.79
snR19	snR19	YPL229W	Q99395	206 aa		3.84	□□□□□ -1.79
snR19	snR19	AHT1	P29589	182 aa		3.83	□□□□□ -1.8
snR19	snR19	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
snR19	snR19	YGP1	P38616	354 aa	Known RBP	3.83	□□□□□ -1.8
snR19	snR19	EGT2	P42835	1041 aa		3.83	□□□□□ -1.8
snR19	snR19	YGL118C	P53132	145 aa		3.83	□□□□□ -1.8
snR19	snR19	MMS2	P53152	137 aa		3.83	□□□□□ -1.8
snR19	snR19	TPC1	P53257	314 aa		3.83	□□□□□ -1.8
snR19	snR19	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.83	□□□□□ -1.8	not detected
snR19	snR19	BUD25	P85052	153 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms