RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	YOL118C	Q08259	102 aa		3.05	□□□□□ -1.92
FDH1	YOR388C	GRE1	Q08969	168 aa		3.05	□□□□□ -1.92
FDH1	YOR388C	YLR050C	Q12155	161 aa	Known RBP	3.05	□□□□□ -1.92
FDH1	YOR388C	POC4	Q12245	148 aa	Predicted RBP	3.05	□□□□□ -1.92
FDH1	YOR388C	SMT3	Q12306	101 aa	Known RBP	3.05	□□□□□ -1.92
FDH1	YOR388C	PAI3	P01094	68 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	CUP2	P15315	225 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	YBR220C	P38318	560 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	YHL044W	P38727	235 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	HAC1	P41546	238 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	BRP1	P53194	125 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	CPD1	P53314	239 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	MRPL19	P53875	158 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	API2	Q04413	109 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	YOL029C	Q08187	201 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	LDS2	Q08218	356 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	YOR186W	Q08560	144 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	FIT3	Q08907	204 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	ATO3	Q12359	275 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	GEP5	Q12393	293 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	YOR192C-C	Q3E736	78 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	YLR363W-A	Q3E747	85 aa		3.04	□□□□□ -1.92
FDH1	YOR388C	TIR1	P10863	254 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	QRI5	P32344	111 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	ECM33	P38248	429 aa	Known RBP	3.03	□□□□□ -1.92
FDH1	YOR388C	DER1	P38307	211 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	YER084W	P40057	128 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	YNL200C	P40165	246 aa	Known RBP	3.03	□□□□□ -1.92
FDH1	YOR388C	CYB5	P40312	120 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	YIL029C	P40538	142 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	YJR085C	P47131	105 aa	Known RBP	3.03	□□□□□ -1.92
FDH1	YOR388C	DSK2	P48510	373 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	CAB4	P53332	305 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	SWT21	P53873	357 aa	Predicted RBP	3.03	□□□□□ -1.92
FDH1	YOR388C	ADH6	Q04894	360 aa	Known RBP	3.03	□□□□□ -1.92
FDH1	YOR388C	ARC18	Q05933	178 aa	Known RBP	3.03	□□□□□ -1.92
FDH1	YOR388C	PRP11	Q07350	266 aa	Predicted RBP	3.03	□□□□□ -1.92
FDH1	YOR388C	YOR292C	Q08743	309 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	YOR097C	Q12274	175 aa	Predicted RBP	3.03	□□□□□ -1.92
FDH1	YOR388C	SCS22	Q6Q595	175 aa		3.03	□□□□□ -1.92
FDH1	YOR388C	ADH1	P00330	348 aa	Known RBP	3.02	□□□□□ -1.93
FDH1	YOR388C	HMRA1	P0CY11	126 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	ANB1	P19211	157 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	HMX1	P32339	317 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	ZRT1	P32804	376 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	SOR1	P35497	357 aa	Known RBP	3.02	□□□□□ -1.93
FDH1	YOR388C	YKR070W	P36151	352 aa	Known RBP	3.02	□□□□□ -1.93
FDH1	YOR388C	LSM2	P38203	95 aa	Known RBP	3.02	□□□□□ -1.93
FDH1	YOR388C	CCS1	P40202	249 aa	Known RBP	3.02	□□□□□ -1.93
FDH1	YOR388C	YJR015W	P47090	510 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	SIP18	P50263	79 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	YIP5	P53108	310 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	RIM9	Q04734	239 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	SOR2	Q07786	357 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	PAM18	Q07914	168 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	HRD1	Q08109	551 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	FSF1	Q12029	327 aa	Known RBP	3.02	□□□□□ -1.93
FDH1	YOR388C	UTP23	Q12339	254 aa	Known RBP	3.02	□□□□□ -1.93
FDH1	YOR388C	MPD1	Q12404	318 aa	Known RBP	3.02	□□□□□ -1.93
FDH1	YOR388C	BOL1	Q3E793	110 aa		3.02	□□□□□ -1.93
FDH1	YOR388C	MSI1	P13712	422 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	RPL30	P14120	105 aa	Known RBP	3.01	□□□□□ -1.93
FDH1	YOR388C	RAD23	P32628	398 aa	Known RBP	3.01	□□□□□ -1.93
FDH1	YOR388C	ECM14	P38836	430 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	YAR068W	P39564	161 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	SNU13	P39990	126 aa	Known RBP	3.01	□□□□□ -1.93
FDH1	YOR388C	YIL012W	P40551	113 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	TDA4	P47153	279 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	MIC27	P50945	234 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	UBC13	P52490	153 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	YGL118C	P53132	145 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	DIA1	P54005	336 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	VPS71	Q03433	280 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	YDR391C	Q04170	232 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	YIL102C-A	Q2V2P5	75 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	Q0297	Q9ZZV8	51 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	BPH1	P25356	2167 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	DYN1	P36022	4092 aa		3.01	□□□□□ -1.93
FDH1	YOR388C	DAL80	P26343	269 aa		3	□□□□□ -1.93
FDH1	YOR388C	YUH1	P35127	236 aa		3	□□□□□ -1.93
FDH1	YOR388C	MCH2	P36032	473 aa		3	□□□□□ -1.93
FDH1	YOR388C	NTC20	P38302	140 aa	Predicted RBP	3	□□□□□ -1.93
FDH1	YOR388C	PCL7	P40186	285 aa		3	□□□□□ -1.93
FDH1	YOR388C	ARP3	P47117	449 aa	Known RBP	3	□□□□□ -1.93
FDH1	YOR388C	SDS23	P53172	527 aa		3	□□□□□ -1.93
FDH1	YOR388C	YNL184C	P53876	108 aa		3	□□□□□ -1.93
FDH1	YOR388C	ATP19	P81451	68 aa		3	□□□□□ -1.93
FDH1	YOR388C	SED1	Q01589	338 aa		3	□□□□□ -1.93
FDH1	YOR388C	DYN2	Q02647	92 aa		3	□□□□□ -1.93
FDH1	YOR388C	ELC1	Q03071	99 aa		3	□□□□□ -1.93
FDH1	YOR388C	RAV2	Q03956	351 aa		3	□□□□□ -1.93
FDH1	YOR388C	DPP1	Q05521	289 aa		3	□□□□□ -1.93
FDH1	YOR388C	JID1	Q12350	301 aa		3	□□□□□ -1.93
FDH1	YOR388C	MDN1	Q12019	4910 aa	Known RBP	2.99	□□□□□ -1.93
FDH1	YOR388C	MRS1	P07266	363 aa		2.99	□□□□□ -1.93
FDH1	YOR388C	SAG1	P20840	650 aa		2.99	□□□□□ -1.93
FDH1	YOR388C	SEC72	P39742	193 aa	Known RBP	2.99	□□□□□ -1.93
FDH1	YOR388C	MIG3	P39943	394 aa		2.99	□□□□□ -1.93
FDH1	YOR388C	YER121W	P40076	114 aa		2.99	□□□□□ -1.93
FDH1	YOR388C	EGT2	P42835	1041 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms