RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C FIT1Q04433 528 aa1.06□□□□□ -2.24
RPB11YOL005C RFU1Q08003 200 aa1.06□□□□□ -2.24
RPB11YOL005C IRC23Q08416 157 aa1.06□□□□□ -2.24
RPB11YOL005C FSF1Q12029 327 aaKnown RBP1.06□□□□□ -2.24
RPB11YOL005C YGR035W-AQ45U48 73 aa1.06□□□□□ -2.24
RPB11YOL005C ATG40Q99325 256 aa1.06□□□□□ -2.24
RPB11YOL005C HTB1P02293 131 aaKnown RBP1.05□□□□□ -2.24
RPB11YOL005C HTB2P02294 131 aa1.05□□□□□ -2.24
RPB11YOL005C YGL041W-AP0C5N3 154 aa1.05□□□□□ -2.24
RPB11YOL005C RPB3P16370 318 aaKnown RBP1.05□□□□□ -2.24
RPB11YOL005C PHO85P17157 305 aa1.05□□□□□ -2.24
RPB11YOL005C APA2P22108 325 aa1.05□□□□□ -2.24
RPB11YOL005C SHE2P36068 246 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
RPB11YOL005C PAU24P38155 120 aa1.05□□□□□ -2.24
RPB11YOL005C YBR209WP38311 105 aa1.05□□□□□ -2.24
RPB11YOL005C IKI1P38874 309 aa1.05□□□□□ -2.24
RPB11YOL005C NVJ1P38881 321 aa1.05□□□□□ -2.24
RPB11YOL005C RIO2P40160 425 aaKnown RBP1.05□□□□□ -2.24
RPB11YOL005C PDS1P40316 373 aaPredicted RBP1.05□□□□□ -2.24
RPB11YOL005C GNA1P43577 159 aaPredicted RBP1.05□□□□□ -2.24
RPB11YOL005C GPI14P47088 403 aaKnown RBP1.05□□□□□ -2.24
RPB11YOL005C AIM25P47140 327 aa1.05□□□□□ -2.24
RPB11YOL005C TTI2P47168 421 aa1.05□□□□□ -2.24
RPB11YOL005C CCC1P47818 322 aa1.05□□□□□ -2.24
RPB11YOL005C VMA10P48836 114 aaKnown RBP1.05□□□□□ -2.24
RPB11YOL005C COG5P53951 403 aa1.05□□□□□ -2.24
RPB11YOL005C TIM11P81449 96 aaPredicted RBP1.05□□□□□ -2.24
RPB11YOL005C YPL067CQ02754 198 aa1.05□□□□□ -2.24
RPB11YOL005C TLG1Q03322 224 aa1.05□□□□□ -2.24
RPB11YOL005C VPS71Q03433 280 aa1.05□□□□□ -2.24
RPB11YOL005C RRP17Q04031 235 aaPredicted RBP1.05□□□□□ -2.24
RPB11YOL005C YLR031WQ07978 186 aa1.05□□□□□ -2.24
RPB11YOL005C DGK1Q12382 290 aa1.05□□□□□ -2.24
RPB11YOL005C SEC4P07560 215 aaKnown RBP1.04□□□□□ -2.24
RPB11YOL005C YHR212W-AP0CX91 67 aa1.04□□□□□ -2.24
RPB11YOL005C MAG1P22134 296 aaKnown RBP1.04□□□□□ -2.24
RPB11YOL005C PAU2P32612 120 aa1.04□□□□□ -2.24
RPB11YOL005C SFK1P35735 353 aa1.04□□□□□ -2.24
RPB11YOL005C SNU13P39990 126 aaKnown RBP1.04□□□□□ -2.24
RPB11YOL005C KNH1P50112 268 aa1.04□□□□□ -2.24
RPB11YOL005C HHT1P61830 136 aa1.04□□□□□ -2.24
RPB11YOL005C YLR236CA0A023PZG4 107 aa1.03□□□□□ -2.24
RPB11YOL005C SEN2P16658 377 aa1.03□□□□□ -2.24
RPB11YOL005C ATP15P21306 62 aa1.03□□□□□ -2.24
RPB11YOL005C AHC2P25649 128 aa1.03□□□□□ -2.24
RPB11YOL005C OCH1P31755 480 aa1.03□□□□□ -2.24
RPB11YOL005C RPB7P34087 171 aa1.03□□□□□ -2.24
RPB11YOL005C UPS2P35200 230 aa1.03□□□□□ -2.24
RPB11YOL005C MRPL38P35996 138 aaPredicted RBP1.03□□□□□ -2.24
RPB11YOL005C PAN3P36102 679 aaPredicted RBP1.03□□□□□ -2.24
RPB11YOL005C YPT31P38555 223 aaKnown RBP1.03□□□□□ -2.24
RPB11YOL005C HTD2P38790 280 aaKnown RBP1.03□□□□□ -2.24
RPB11YOL005C HPA3P39979 161 aa1.03□□□□□ -2.24
RPB11YOL005C VPS55P47111 140 aa1.03□□□□□ -2.24
RPB11YOL005C YGL204CP53089 101 aa1.03□□□□□ -2.24
RPB11YOL005C UPS1Q05776 175 aa1.03□□□□□ -2.24
RPB11YOL005C HOR7Q05827 59 aa1.03□□□□□ -2.24
RPB11YOL005C RAD28Q12021 506 aa1.03□□□□□ -2.24
RPB11YOL005C ATG41Q12048 136 aa1.03□□□□□ -2.24
RPB11YOL005C HUG1Q6Q5K6 68 aa1.03□□□□□ -2.24
RPB11YOL005C MED11Q99278 115 aa1.03□□□□□ -2.24
RPB11YOL005C COX9P07255 59 aa1.02□□□□□ -2.25
RPB11YOL005C RFA3P26755 122 aaKnown RBP1.02□□□□□ -2.25
RPB11YOL005C TRR1P29509 319 aaKnown RBP1.02□□□□□ -2.25
RPB11YOL005C YAE1P47118 141 aaPredicted RBP1.02□□□□□ -2.25
RPB11YOL005C SOL1P50278 321 aa1.02□□□□□ -2.25
RPB11YOL005C YGR025WP53216 100 aa1.02□□□□□ -2.25
RPB11YOL005C POP3P53833 195 aaPredicted RBP1.02□□□□□ -2.25
RPB11YOL005C DYN2Q02647 92 aa1.02□□□□□ -2.25
RPB11YOL005C CUE4Q04201 117 aaPredicted RBP1.02□□□□□ -2.25
RPB11YOL005C HNT1Q04344 158 aaKnown RBP1.02□□□□□ -2.25
RPB11YOL005C NOC4Q06512 552 aaPredicted RBP1.02□□□□□ -2.25
RPB11YOL005C YPD1Q07688 167 aa1.02□□□□□ -2.25
RPB11YOL005C RDI1Q12434 202 aa1.02□□□□□ -2.25
RPB11YOL005C YOR011W-AQ3E807 68 aa1.02□□□□□ -2.25
RPB11YOL005C RPL27AP0C2H6 136 aaKnown RBP1.01□□□□□ -2.25
RPB11YOL005C STF2P16965 84 aa1.01□□□□□ -2.25
RPB11YOL005C ROX3P25046 220 aa1.01□□□□□ -2.25
RPB11YOL005C YCR101CP25607 182 aa1.01□□□□□ -2.25
RPB11YOL005C SUA7P29055 345 aaPredicted RBP1.01□□□□□ -2.25
RPB11YOL005C YER137CP40083 148 aaKnown RBP1.01□□□□□ -2.25
RPB11YOL005C CCS1P40202 249 aaKnown RBP1.01□□□□□ -2.25
RPB11YOL005C HUA1P40325 198 aa1.01□□□□□ -2.25
RPB11YOL005C RFC2P40348 353 aa1.01□□□□□ -2.25
RPB11YOL005C YJL218WP40892 196 aaKnown RBP1.01□□□□□ -2.25
RPB11YOL005C LST8P41318 303 aa1.01□□□□□ -2.25
RPB11YOL005C SER2P42941 309 aa1.01□□□□□ -2.25
RPB11YOL005C RBL2P48606 106 aaKnown RBP1.01□□□□□ -2.25
RPB11YOL005C TMA20P89886 181 aaPredicted RBP1.01□□□□□ -2.25
RPB11YOL005C VPS28Q02767 242 aa1.01□□□□□ -2.25
RPB11YOL005C YHP1Q04116 353 aa1.01□□□□□ -2.25
RPB11YOL005C SUS1Q6WNK7 96 aa1.01□□□□□ -2.25
RPB11YOL005C PET54P10834 293 aa1□□□□□ -2.25
RPB11YOL005C AUA1P32450 94 aa1□□□□□ -2.25
RPB11YOL005C CPR5P35176 225 aa1□□□□□ -2.25
RPB11YOL005C YHR138CP38841 114 aaPredicted RBP1□□□□□ -2.25
RPB11YOL005C ARP3P47117 449 aaKnown RBP1□□□□□ -2.25
RPB11YOL005C THI74Q04083 370 aa1□□□□□ -2.25
RPB11YOL005C RRT7Q07829 113 aa1□□□□□ -2.25
RPB11YOL005C SCP1Q08873 200 aa1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms