RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C YHM2Q04013 314 aa6.2□□□□□ -1.42
NDE1YMR145C SMT3Q12306 101 aaKnown RBP6.2□□□□□ -1.42
NDE1YMR145C AUR1P36107 401 aaPredicted RBP6.2□□□□□ -1.42
NDE1YMR145C SMP1P38128 452 aa6.2□□□□□ -1.42
NDE1YMR145C MBB1P39534 108 aa6.2□□□□□ -1.42
NDE1YMR145C BXI1P48558 297 aa6.2□□□□□ -1.42
NDE1YMR145C YDR042CQ03205 200 aa6.2□□□□□ -1.42
NDE1YMR145C RPS10AQ08745 105 aaPredicted RBP6.2□□□□□ -1.42
NDE1YMR145C OM14P38325 134 aa6.19□□□□□ -1.42
NDE1YMR145C YER181CP40097 107 aa6.19□□□□□ -1.42
NDE1YMR145C YNL200CP40165 246 aaKnown RBP6.19□□□□□ -1.42
NDE1YMR145C BRP1P53194 125 aa6.19□□□□□ -1.42
NDE1YMR145C SPO24Q3E752 67 aa6.19□□□□□ -1.42
NDE1YMR145C YPL038W-AQ3E7B4 63 aa6.19□□□□□ -1.42
NDE1YMR145C YCR006CP25350 157 aa6.18□□□□□ -1.42
NDE1YMR145C YHR140WP38842 239 aa6.18□□□□□ -1.42
NDE1YMR145C TDA4P47153 279 aa6.18□□□□□ -1.42
NDE1YMR145C YLR281CQ05863 155 aa6.18□□□□□ -1.42
NDE1YMR145C GAT3Q07928 141 aa6.18□□□□□ -1.42
NDE1YMR145C IGO2Q9P305 131 aa6.18□□□□□ -1.42
NDE1YMR145C YKL044WP36092 106 aa6.17□□□□□ -1.42
NDE1YMR145C YFR054CP43622 192 aa6.17□□□□□ -1.42
NDE1YMR145C CPD1P53314 239 aa6.17□□□□□ -1.42
NDE1YMR145C YMR175W-AQ3E766 64 aa6.17□□□□□ -1.42
NDE1YMR145C FIP1P45976 327 aa6.17□□□□□ -1.42
NDE1YMR145C CRH1P53301 507 aa6.17□□□□□ -1.42
NDE1YMR145C TDA7P53882 636 aaPredicted RBP6.17□□□□□ -1.42
NDE1YMR145C YMR317WQ04893 1140 aa6.17□□□□□ -1.42
NDE1YMR145C YOR387CQ08910 206 aa6.17□□□□□ -1.42
NDE1YMR145C MTC7P32633 139 aa6.16□□□□□ -1.42
NDE1YMR145C SKI6P46948 246 aaPredicted RBP6.16□□□□□ -1.42
NDE1YMR145C MST27P53176 234 aa6.16□□□□□ -1.42
NDE1YMR145C CSR2Q12734 1121 aa6.16□□□□□ -1.42
NDE1YMR145C YHR139C-AO13536 103 aa6.15□□□□□ -1.42
NDE1YMR145C RPS21AP0C0V8 87 aaKnown RBP6.15□□□□□ -1.42
NDE1YMR145C FZF1P32805 299 aa6.15□□□□□ -1.42
NDE1YMR145C CIS3P47001 227 aa6.15□□□□□ -1.42
NDE1YMR145C YDR209CQ03480 137 aa6.15□□□□□ -1.42
NDE1YMR145C YLR149CQ99296 730 aa6.15□□□□□ -1.42
NDE1YMR145C UBC4P15731 148 aa6.14□□□□□ -1.43
NDE1YMR145C REC114P32841 428 aa6.14□□□□□ -1.43
NDE1YMR145C VPS55P47111 140 aa6.14□□□□□ -1.43
NDE1YMR145C YIL014C-AQ02598 104 aa6.14□□□□□ -1.43
NDE1YMR145C MCH4Q08268 501 aa6.14□□□□□ -1.43
NDE1YMR145C IES4Q08561 116 aa6.14□□□□□ -1.43
NDE1YMR145C YLR302CO13544 120 aa6.13□□□□□ -1.43
NDE1YMR145C RRT13P40042 185 aa6.13□□□□□ -1.43
NDE1YMR145C OST1P41543 476 aaKnown RBP6.13□□□□□ -1.43
NDE1YMR145C MIM1Q08176 113 aa6.13□□□□□ -1.43
NDE1YMR145C AQY1P0CD91 305 aa6.12□□□□□ -1.43
NDE1YMR145C YRA2P36036 203 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
NDE1YMR145C SGN1P40561 250 aaKnown RBP RIP-Chip data6.12□□□□□ -1.43not detected
NDE1YMR145C Q0255P03881 472 aa6.11□□□□□ -1.43
NDE1YMR145C RPL30P14120 105 aaKnown RBP6.11□□□□□ -1.43
NDE1YMR145C QCR9P22289 66 aa6.11□□□□□ -1.43
NDE1YMR145C BET1P22804 142 aa6.11□□□□□ -1.43
NDE1YMR145C QRI5P32344 111 aa6.11□□□□□ -1.43
NDE1YMR145C BUD8P41698 603 aa6.11□□□□□ -1.43
NDE1YMR145C YMR316C-AI2HB70 103 aa6.1□□□□□ -1.43
NDE1YMR145C GGC1P38988 300 aa6.1□□□□□ -1.43
NDE1YMR145C MZM1Q03429 123 aaPredicted RBP6.1□□□□□ -1.43
NDE1YMR145C RPL20AP0CX23 172 aaKnown RBP6.1□□□□□ -1.43
NDE1YMR145C RPL20BP0CX24 172 aaPredicted RBP6.1□□□□□ -1.43
NDE1YMR145C YIL163CP40448 117 aa6.1□□□□□ -1.43
NDE1YMR145C GAT4P40569 121 aa6.1□□□□□ -1.43
NDE1YMR145C SLG1P54867 378 aa6.1□□□□□ -1.43
NDE1YMR145C HAL1Q01766 294 aa6.1□□□□□ -1.43
NDE1YMR145C YOR186WQ08560 144 aa6.1□□□□□ -1.43
NDE1YMR145C SUT2Q12286 268 aa6.1□□□□□ -1.43
NDE1YMR145C SFT2P38166 215 aa6.09□□□□□ -1.43
NDE1YMR145C SHH4Q06236 168 aa6.09□□□□□ -1.43
NDE1YMR145C LSM6Q06406 86 aaKnown RBP6.09□□□□□ -1.43
NDE1YMR145C TIM18Q08749 192 aa6.09□□□□□ -1.43
NDE1YMR145C COX17Q12287 69 aa6.09□□□□□ -1.43
NDE1YMR145C EMC6Q12431 108 aa6.09□□□□□ -1.43
NDE1YMR145C YDR381C-AQ3E6R5 114 aa6.09□□□□□ -1.43
NDE1YMR145C HTL1Q9URQ5 78 aa6.09□□□□□ -1.43
NDE1YMR145C IMP1P28627 190 aa6.08□□□□□ -1.44
NDE1YMR145C APS1P35181 156 aa6.08□□□□□ -1.44
NDE1YMR145C YBL081WP38180 368 aaKnown RBP6.08□□□□□ -1.44
NDE1YMR145C MED6P38782 295 aa6.08□□□□□ -1.44
NDE1YMR145C VHS2P40463 436 aa6.08□□□□□ -1.44
NDE1YMR145C RSM19P53733 91 aaPredicted RBP6.08□□□□□ -1.44
NDE1YMR145C YPR064WQ12492 139 aa6.08□□□□□ -1.44
NDE1YMR145C PIS1P06197 220 aaKnown RBP6.07□□□□□ -1.44
NDE1YMR145C MRPL31P14063 131 aaPredicted RBP6.07□□□□□ -1.44
NDE1YMR145C ATP23P53722 227 aa6.07□□□□□ -1.44
NDE1YMR145C YNL046WP53956 172 aa6.07□□□□□ -1.44
NDE1YMR145C MET32Q12041 191 aa6.07□□□□□ -1.44
NDE1YMR145C FIG2P25653 1609 aa6.07□□□□□ -1.44
NDE1YMR145C RFA2P26754 273 aaKnown RBP6.07□□□□□ -1.44
NDE1YMR145C CSL4P53859 292 aaPredicted RBP6.07□□□□□ -1.44
NDE1YMR145C NIP7Q08962 181 aaKnown RBP6.07□□□□□ -1.44
NDE1YMR145C YBR255C-AQ3E776 120 aa6.07□□□□□ -1.44
NDE1YMR145C FLO9P39712 1322 aa6.06□□□□□ -1.44
NDE1YMR145C RPL23AP0CX41 137 aaKnown RBP6.06□□□□□ -1.44
NDE1YMR145C RPL23BP0CX42 137 aaKnown RBP6.06□□□□□ -1.44
NDE1YMR145C ERG2P32352 222 aa6.06□□□□□ -1.44
NDE1YMR145C RTG1P32607 177 aa6.06□□□□□ -1.44
NDE1YMR145C RPP1P38786 293 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms