RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	YOR032W-A	Q8TGS1	66 aa		0.68	□□□□□ -2.3
YCS4	YLR272C	MRPL15	P36523	253 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	YHR140W	P38842	239 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	TIR3	P40552	269 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	BOL2	P53082	120 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	ORM1	P53224	222 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	YNR064C	P53750	290 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	IGO1	P53897	168 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	COX9	P07255	59 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	ETR1	P38071	380 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	YBR032W	P38223	100 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	YHL037C	P38733	133 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	IPI1	P38803	334 aa	Predicted RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	IRC22	P40006	225 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	SMX2	P40204	77 aa	Known RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	RPL13B	P40212	199 aa	Known RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	APS3	P47064	194 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	NMA1	Q06178	401 aa	Known RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	FSF1	Q12029	327 aa	Known RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	PSF1	Q12488	208 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	RPL13A	Q12690	199 aa	Predicted RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	MED11	Q99278	115 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	HYM1	P32464	399 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	RPS12	P48589	143 aa	Known RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	CAB4	P53332	305 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	COS6	P53344	381 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	YNL010W	P53981	241 aa	Known RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	SYM1	Q06563	197 aa		0.67	□□□□□ -2.3
YCS4	YLR272C	PST2	Q12335	198 aa	Known RBP	0.67	□□□□□ -2.3
YCS4	YLR272C	YCR099C	P25657	155 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	UTP11	P34247	250 aa	Predicted RBP	0.66	□□□□□ -2.3
YCS4	YLR272C	APQ12	P40532	138 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	YPL229W	Q99395	206 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	TOM40	P23644	387 aa	Known RBP	0.66	□□□□□ -2.3
YCS4	YLR272C	YCR101C	P25607	182 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	YBR209W	P38311	105 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	SWC7	Q06707	132 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	OCA6	Q12454	224 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	YKL068W-A	Q3E826	78 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	MHF1	Q3E835	90 aa		0.66	□□□□□ -2.3
YCS4	YLR272C	SPO73	P40031	143 aa		0.65	□□□□□ -2.3
YCS4	YLR272C	PAC10	P48363	199 aa		0.65	□□□□□ -2.3
YCS4	YLR272C	YNL122C	P53921	115 aa	Predicted RBP	0.65	□□□□□ -2.3
YCS4	YLR272C	MHF2	Q3E829	80 aa		0.65	□□□□□ -2.3
YCS4	YLR272C	YOL085C	Q99345	113 aa		0.65	□□□□□ -2.3
YCS4	YLR272C	RPS1B	P23248	255 aa	Known RBP	0.65	□□□□□ -2.31
YCS4	YLR272C	RPC19	P28000	142 aa	Known RBP	0.65	□□□□□ -2.31
YCS4	YLR272C	YEL073C	P39974	107 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	PEP8	P40335	379 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	UBC12	P52491	188 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	YPL225W	Q08971	146 aa	Known RBP	0.65	□□□□□ -2.31
YCS4	YLR272C	Q0144	Q9ZZW2	109 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	RRT1	P38192	103 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	YEL014C	P39999	101 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	YER137C	P40083	148 aa	Known RBP	0.65	□□□□□ -2.31
YCS4	YLR272C	TMA23	Q03525	211 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	CSN9	Q03981	162 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	YOR268C	Q08734	132 aa		0.65	□□□□□ -2.31
YCS4	YLR272C	SGA1	P08019	549 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	SCM4	P32564	187 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	IPT1	P38954	527 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	ALB1	P47019	175 aa	Predicted RBP	0.64	□□□□□ -2.31
YCS4	YLR272C	YAE1	P47118	141 aa	Predicted RBP	0.64	□□□□□ -2.31
YCS4	YLR272C	BRP1	P53194	125 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	PGA1	P53896	198 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	YDR366C	P87287	132 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	YOL162W	P0CF19	215 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	RPA43	P46669	326 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	BAT2	P47176	376 aa	Known RBP	0.64	□□□□□ -2.31
YCS4	YLR272C	AIM11	P87275	137 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	YOL131W	Q08270	108 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	YOR289W	Q12012	251 aa	Predicted RBP	0.64	□□□□□ -2.31
YCS4	YLR272C	ATG41	Q12048	136 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	FPR2	P32472	135 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	LHP1	P33399	275 aa	Known RBP	0.64	□□□□□ -2.31
YCS4	YLR272C	PRS3	P38689	320 aa	Known RBP	0.64	□□□□□ -2.31
YCS4	YLR272C	DIE2	P50076	525 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	YPL067C	Q02754	198 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	YPD1	Q07688	167 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	YOR385W	Q08909	290 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	YMR030W-A	Q3E760	96 aa		0.64	□□□□□ -2.31
YCS4	YLR272C	UBI4	P0CG63	381 aa	Known RBP	0.63	□□□□□ -2.31
YCS4	YLR272C	PRE1	P22141	198 aa	Known RBP	0.63	□□□□□ -2.31
YCS4	YLR272C	BUD23	P25627	275 aa	Predicted RBP	0.63	□□□□□ -2.31
YCS4	YLR272C	SRX1	P36077	127 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	HUA1	P40325	198 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	YFL051C	P43552	160 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	PAU12	P53343	120 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	GPI11	Q06636	219 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	UBC8	P28263	218 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	YBL010C	P32788	280 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.63	□□□□□ -2.31	not detected
YCS4	YLR272C	NRG2	P38082	220 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	RGI1	P40043	161 aa	Predicted RBP	0.63	□□□□□ -2.31
YCS4	YLR272C	CCS1	P40202	249 aa	Known RBP	0.63	□□□□□ -2.31
YCS4	YLR272C	XPT1	P47165	209 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	MPC3	P53311	146 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	SED1	Q01589	338 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	IRC19	Q07843	230 aa		0.63	□□□□□ -2.31
YCS4	YLR272C	SEC59	P20048	519 aa		0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms