RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YHR213WP0CI67 198 aa0.54□□□□□ -2.32
SEC22YLR268W SFT2P38166 215 aa0.54□□□□□ -2.32
SEC22YLR268W LST8P41318 303 aa0.54□□□□□ -2.32
SEC22YLR268W RBL2P48606 106 aaKnown RBP0.54□□□□□ -2.32
SEC22YLR268W YPL067CQ02754 198 aa0.54□□□□□ -2.32
SEC22YLR268W YOR385WQ08909 290 aa0.54□□□□□ -2.32
SEC22YLR268W COA6Q3E846 104 aa0.54□□□□□ -2.32
SEC22YLR268W NMT1P14743 455 aa0.53□□□□□ -2.32
SEC22YLR268W MRPL44P19956 98 aa0.53□□□□□ -2.32
SEC22YLR268W RPC19P28000 142 aaKnown RBP0.53□□□□□ -2.32
SEC22YLR268W POP7P38291 140 aa0.53□□□□□ -2.32
SEC22YLR268W YAP3P38749 330 aa0.53□□□□□ -2.32
SEC22YLR268W YGR039WP53225 103 aa0.53□□□□□ -2.32
SEC22YLR268W COF1Q03048 143 aaKnown RBP0.53□□□□□ -2.32
SEC22YLR268W SPC3Q12133 184 aa0.53□□□□□ -2.32
SEC22YLR268W RPL40AP0CH08 128 aaKnown RBP0.52□□□□□ -2.33
SEC22YLR268W RPL40BP0CH09 128 aaKnown RBP0.52□□□□□ -2.33
SEC22YLR268W FUN14P18411 198 aa0.52□□□□□ -2.33
SEC22YLR268W RPS1AP33442 255 aaKnown RBP0.52□□□□□ -2.33
SEC22YLR268W UTP11P34247 250 aaPredicted RBP0.52□□□□□ -2.33
SEC22YLR268W MVB12P42939 101 aa0.52□□□□□ -2.33
SEC22YLR268W EMC4P53073 190 aa0.52□□□□□ -2.33
SEC22YLR268W BRP1P53194 125 aa0.52□□□□□ -2.33
SEC22YLR268W COA4Q05809 96 aa0.52□□□□□ -2.33
SEC22YLR268W SKI3P17883 1432 aaKnown RBP0.51□□□□□ -2.33
SEC22YLR268W GIM4P40005 111 aaKnown RBP0.51□□□□□ -2.33
SEC22YLR268W YGL149WP53116 101 aa0.51□□□□□ -2.33
SEC22YLR268W SPC2Q04969 178 aa0.51□□□□□ -2.33
SEC22YLR268W FIT3Q08907 204 aa0.51□□□□□ -2.33
SEC22YLR268W HUG1Q6Q5K6 68 aa0.51□□□□□ -2.33
SEC22YLR268W ECM5Q03214 1411 aa0.5□□□□□ -2.33
SEC22YLR268W PFY1P07274 126 aa0.5□□□□□ -2.33
SEC22YLR268W ACP1P32463 125 aa0.5□□□□□ -2.33
SEC22YLR268W YLR296WQ05898 108 aa0.5□□□□□ -2.33
SEC22YLR268W YPR117WQ06116 2489 aa0.5□□□□□ -2.33
SEC22YLR268W HAP3P13434 144 aa0.49□□□□□ -2.33
SEC22YLR268W RPL14AP36105 138 aaKnown RBP0.49□□□□□ -2.33
SEC22YLR268W QCR10P37299 77 aa0.49□□□□□ -2.33
SEC22YLR268W AIM4P38305 123 aaPredicted RBP0.49□□□□□ -2.33
SEC22YLR268W RPL14BP38754 138 aaKnown RBP0.49□□□□□ -2.33
SEC22YLR268W HPM1P40481 377 aa0.49□□□□□ -2.33
SEC22YLR268W YGL204CP53089 101 aa0.49□□□□□ -2.33
SEC22YLR268W YGR042WP53227 271 aa0.49□□□□□ -2.33
SEC22YLR268W SPC24Q04477 213 aa0.49□□□□□ -2.33
SEC22YLR268W YOR289WQ12012 251 aaPredicted RBP0.49□□□□□ -2.33
SEC22YLR268W GTT2Q12390 233 aa0.49□□□□□ -2.33
SEC22YLR268W YLR307C-AQ3E825 87 aa0.49□□□□□ -2.33
SEC22YLR268W MDS3P53094 1487 aa0.48□□□□□ -2.33
SEC22YLR268W RAD50P12753 1312 aa0.48□□□□□ -2.33
SEC22YLR268W YLR157W-EP0CF00 54 aa0.48□□□□□ -2.33
SEC22YLR268W YCR050CP25630 102 aa0.48□□□□□ -2.33
SEC22YLR268W MRPL11P36521 249 aaPredicted RBP0.48□□□□□ -2.33
SEC22YLR268W YBR013CP38215 129 aa0.48□□□□□ -2.33
SEC22YLR268W CYC2P38909 366 aa0.48□□□□□ -2.33
SEC22YLR268W ELC1Q03071 99 aa0.48□□□□□ -2.33
SEC22YLR268W SDH7Q04401 133 aa0.48□□□□□ -2.33
SEC22YLR268W YMR321CQ04898 105 aa0.48□□□□□ -2.33
SEC22YLR268W YPL225WQ08971 146 aaKnown RBP0.48□□□□□ -2.33
SEC22YLR268W ATP14Q12349 124 aa0.48□□□□□ -2.33
SEC22YLR268W YOR034C-AQ3E735 80 aa0.48□□□□□ -2.33
SEC22YLR268W TOP2P06786 1428 aaKnown RBP0.47□□□□□ -2.33
SEC22YLR268W SSN2P38931 1420 aa0.47□□□□□ -2.33
SEC22YLR268W TSC11P40061 1430 aa0.47□□□□□ -2.33
SEC22YLR268W SNT2P53127 1403 aa0.47□□□□□ -2.33
SEC22YLR268W BUD23P25627 275 aaPredicted RBP0.47□□□□□ -2.33
SEC22YLR268W SUA7P29055 345 aaPredicted RBP0.47□□□□□ -2.33
SEC22YLR268W GSP1P32835 219 aaKnown RBP0.47□□□□□ -2.33
SEC22YLR268W PRS3P38689 320 aaKnown RBP0.47□□□□□ -2.33
SEC22YLR268W YAL064WP39711 94 aa0.47□□□□□ -2.33
SEC22YLR268W RGI1P40043 161 aaPredicted RBP0.47□□□□□ -2.33
SEC22YLR268W MIC27P50945 234 aa0.47□□□□□ -2.33
SEC22YLR268W DYN2Q02647 92 aa0.47□□□□□ -2.33
SEC22YLR268W ARL3Q02804 198 aa0.47□□□□□ -2.33
SEC22YLR268W YDR278CQ05612 105 aa0.47□□□□□ -2.33
SEC22YLR268W RTR2Q12378 196 aa0.47□□□□□ -2.33
SEC22YLR268W SLO1Q3E784 85 aa0.47□□□□□ -2.33
SEC22YLR268W MED11Q99278 115 aa0.47□□□□□ -2.33
SEC22YLR268W Q0144Q9ZZW2 109 aa0.47□□□□□ -2.33
SEC22YLR268W RPO41P13433 1351 aaKnown RBP0.46□□□□□ -2.34
SEC22YLR268W FMP27Q06179 2628 aa0.46□□□□□ -2.34
SEC22YLR268W PAU21P0CE86 164 aa0.46□□□□□ -2.34
SEC22YLR268W PAU22P0CE87 164 aa0.46□□□□□ -2.34
SEC22YLR268W YCR101CP25607 182 aa0.46□□□□□ -2.34
SEC22YLR268W HSP10P38910 106 aa0.46□□□□□ -2.34
SEC22YLR268W VMA7P39111 118 aa0.46□□□□□ -2.34
SEC22YLR268W YER137CP40083 148 aaKnown RBP0.46□□□□□ -2.34
SEC22YLR268W YGR017WP53210 297 aa0.46□□□□□ -2.34
SEC22YLR268W SAE3P89114 91 aa0.46□□□□□ -2.34
SEC22YLR268W FRQ1Q06389 190 aa0.46□□□□□ -2.34
SEC22YLR268W LDB18Q07887 179 aa0.46□□□□□ -2.34
SEC22YLR268W FYV7Q12247 151 aa0.46□□□□□ -2.34
SEC22YLR268W YIR021W-AQ3E739 70 aa0.46□□□□□ -2.34
SEC22YLR268W YLR361C-AQ3E795 98 aa0.46□□□□□ -2.34
SEC22YLR268W YCL001W-BQ96VH2 84 aa0.46□□□□□ -2.34
SEC22YLR268W GSC2P40989 1895 aa0.46□□□□□ -2.34
SEC22YLR268W RTC6O14464 93 aa0.45□□□□□ -2.34
SEC22YLR268W YOR304C-AO14468 76 aa0.45□□□□□ -2.34
SEC22YLR268W YSF3P0C074 85 aaPredicted RBP0.45□□□□□ -2.34
SEC22YLR268W SEC59P20048 519 aa0.45□□□□□ -2.34
SEC22YLR268W AIM18P38884 321 aa0.45□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms