RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C YIL014C-AQ02598 104 aa1.95□□□□□ -2.1
CSF1YLR087C TPP1Q03796 238 aa1.95□□□□□ -2.1
CSF1YLR087C MSO1P53604 210 aaKnown RBP1.95□□□□□ -2.1
CSF1YLR087C YAR068WP39564 161 aa1.95□□□□□ -2.1
CSF1YLR087C YCH1P42937 148 aa1.95□□□□□ -2.1
CSF1YLR087C YLR040CQ07988 224 aa1.95□□□□□ -2.1
CSF1YLR087C HUB1Q6Q546 73 aa1.95□□□□□ -2.1
CSF1YLR087C PAU7P39545 55 aa1.95□□□□□ -2.1
CSF1YLR087C YFL067WP43537 175 aa1.95□□□□□ -2.1
CSF1YLR087C YGR035CP53222 116 aa1.95□□□□□ -2.1
CSF1YLR087C PRM3Q08931 133 aa1.95□□□□□ -2.1
CSF1YLR087C ISU2Q12056 156 aa1.95□□□□□ -2.1
CSF1YLR087C YLR365WQ7LIF2 110 aa1.95□□□□□ -2.1
CSF1YLR087C PAU1P0CE88 120 aa1.94□□□□□ -2.1
CSF1YLR087C PAU14P0CE89 120 aa1.94□□□□□ -2.1
CSF1YLR087C PAU6P0CE90 120 aa1.94□□□□□ -2.1
CSF1YLR087C PAU18P0CE91 120 aa1.94□□□□□ -2.1
CSF1YLR087C PAU8P0CE92 120 aa1.94□□□□□ -2.1
CSF1YLR087C PAU11P0CE93 120 aa1.94□□□□□ -2.1
CSF1YLR087C RPL16AP26784 199 aaKnown RBP1.94□□□□□ -2.1
CSF1YLR087C PAU13P38725 120 aa1.94□□□□□ -2.1
CSF1YLR087C RPS15Q01855 142 aaKnown RBP1.94□□□□□ -2.1
CSF1YLR087C PAU10Q03050 120 aa1.94□□□□□ -2.1
CSF1YLR087C NRG1Q03125 231 aa1.94□□□□□ -2.1
CSF1YLR087C PAU20Q08322 120 aa1.94□□□□□ -2.1
CSF1YLR087C PAU9Q3E770 120 aa1.94□□□□□ -2.1
CSF1YLR087C TIM9O74700 87 aa1.94□□□□□ -2.1
CSF1YLR087C PIS1P06197 220 aaKnown RBP1.94□□□□□ -2.1
CSF1YLR087C ERS1P17261 260 aa1.94□□□□□ -2.1
CSF1YLR087C YFL065CP43539 102 aa1.94□□□□□ -2.1
CSF1YLR087C NRM1P53718 249 aa1.94□□□□□ -2.1
CSF1YLR087C YPR203WQ08994 102 aa1.94□□□□□ -2.1
CSF1YLR087C ROX3P25046 220 aa1.94□□□□□ -2.1
CSF1YLR087C MST28P39552 234 aa1.94□□□□□ -2.1
CSF1YLR087C YDL218WQ07629 317 aa1.94□□□□□ -2.1
CSF1YLR087C YER134CP40081 178 aa1.94□□□□□ -2.1
CSF1YLR087C YIL059CP40520 121 aa1.94□□□□□ -2.1
CSF1YLR087C UBP8P50102 471 aa1.94□□□□□ -2.1
CSF1YLR087C TRP1P00912 224 aa1.94□□□□□ -2.1
CSF1YLR087C WIP1Q2V2P8 89 aa1.94□□□□□ -2.1
CSF1YLR087C CDC26P14724 124 aa1.94□□□□□ -2.1
CSF1YLR087C ECM15P35195 104 aa1.94□□□□□ -2.1
CSF1YLR087C HAL1Q01766 294 aa1.94□□□□□ -2.1
CSF1YLR087C YMR181CQ03231 154 aa1.94□□□□□ -2.1
CSF1YLR087C DGA1Q08650 418 aa1.94□□□□□ -2.1
CSF1YLR087C TOS6P48560 102 aa1.93□□□□□ -2.1
CSF1YLR087C PAU12P53343 120 aa1.93□□□□□ -2.1
CSF1YLR087C YLR152CP54072 576 aa1.93□□□□□ -2.1
CSF1YLR087C MAK31P23059 88 aa1.93□□□□□ -2.1
CSF1YLR087C YKR032WP36127 104 aa1.93□□□□□ -2.1
CSF1YLR087C EDC1P53080 175 aaPredicted RBP1.93□□□□□ -2.1
CSF1YLR087C COX17Q12287 69 aa1.93□□□□□ -2.1
CSF1YLR087C ANS1P38832 159 aa1.93□□□□□ -2.1
CSF1YLR087C Q0010Q9ZZX9 128 aa1.93□□□□□ -2.1
CSF1YLR087C FRM2P37261 193 aa1.93□□□□□ -2.1
CSF1YLR087C MCH4Q08268 501 aa1.93□□□□□ -2.1
CSF1YLR087C MTL1P53214 551 aa1.93□□□□□ -2.1
CSF1YLR087C SAM50P53969 484 aa1.93□□□□□ -2.1
CSF1YLR087C HPF1Q05164 967 aa1.93□□□□□ -2.1
CSF1YLR087C QCR8P08525 94 aa1.93□□□□□ -2.1
CSF1YLR087C UBC4P15731 148 aa1.93□□□□□ -2.1
CSF1YLR087C MSL5Q12186 476 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
CSF1YLR087C NCE102Q12207 173 aaRIP-Chip data1.93□□□□□ -2.1not detected
CSF1YLR087C RPL9AP05738 191 aaKnown RBP1.92□□□□□ -2.1
CSF1YLR087C CSE2P33308 149 aa1.92□□□□□ -2.1
CSF1YLR087C ERG28P40030 148 aa1.92□□□□□ -2.1
CSF1YLR087C YFR054CP43622 192 aa1.92□□□□□ -2.1
CSF1YLR087C JJJ3P47138 172 aa1.92□□□□□ -2.1
CSF1YLR087C PAU4P53427 120 aa1.92□□□□□ -2.1
CSF1YLR087C PTH1P38876 190 aaKnown RBP1.92□□□□□ -2.1
CSF1YLR087C ECO1P43605 281 aa1.92□□□□□ -2.1
CSF1YLR087C ICS3P47034 131 aa1.92□□□□□ -2.1
CSF1YLR087C SNT309Q06091 175 aaPredicted RBP1.92□□□□□ -2.1
CSF1YLR087C IRC19Q07843 230 aa1.92□□□□□ -2.1
CSF1YLR087C SOD1P00445 154 aaKnown RBP1.92□□□□□ -2.1
CSF1YLR087C PAU24P38155 120 aa1.92□□□□□ -2.1
CSF1YLR087C TAX4P47030 604 aa1.92□□□□□ -2.1
CSF1YLR087C SPO24Q3E752 67 aa1.92□□□□□ -2.1
CSF1YLR087C YKR073CP36153 106 aa1.92□□□□□ -2.1
CSF1YLR087C COX14P39103 70 aa1.92□□□□□ -2.1
CSF1YLR087C MST27P53176 234 aa1.92□□□□□ -2.1
CSF1YLR087C CCS1P40202 249 aaKnown RBP1.92□□□□□ -2.1
CSF1YLR087C RPP1P38786 293 aa1.91□□□□□ -2.1
CSF1YLR087C SGN1P40561 250 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
CSF1YLR087C Q0142Q9ZZW4 58 aa1.91□□□□□ -2.1
CSF1YLR087C PFY1P07274 126 aa1.91□□□□□ -2.1
CSF1YLR087C YFR010W-AP0C5N0 62 aa1.91□□□□□ -2.1
CSF1YLR087C ASK1P35734 292 aa1.91□□□□□ -2.1
CSF1YLR087C YER181CP40097 107 aa1.91□□□□□ -2.1
CSF1YLR087C SYM1Q06563 197 aa1.91□□□□□ -2.1
CSF1YLR087C SWM1Q12379 170 aa1.91□□□□□ -2.1
CSF1YLR087C YBR182C-AQ8TGU6 64 aa1.91□□□□□ -2.1
CSF1YLR087C TIM18Q08749 192 aa1.91□□□□□ -2.1
CSF1YLR087C CRC1Q12289 327 aa1.91□□□□□ -2.1
CSF1YLR087C GPI18P38211 433 aa1.91□□□□□ -2.1
CSF1YLR087C PCL5P38794 229 aa1.91□□□□□ -2.1
CSF1YLR087C KRE9P39005 276 aa1.91□□□□□ -2.1
CSF1YLR087C YER076CP40049 302 aa1.91□□□□□ -2.1
CSF1YLR087C AHT1P29589 182 aa1.91□□□□□ -2.1
CSF1YLR087C EMI1Q04406 187 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms