RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C YFR045WP43617 309 aa9.01□□□□□ -0.97
SPT8YLR055C PIR5P46999 287 aa9.01□□□□□ -0.97
SPT8YLR055C YPL257WQ08974 193 aa9.01□□□□□ -0.97
SPT8YLR055C MRS1P07266 363 aa9.01□□□□□ -0.97
SPT8YLR055C SFT2P38166 215 aa9.01□□□□□ -0.97
SPT8YLR055C ECM14P38836 430 aa9.01□□□□□ -0.97
SPT8YLR055C PAU7P39545 55 aa9.01□□□□□ -0.97
SPT8YLR055C YFL015CP43578 164 aa9.01□□□□□ -0.97
SPT8YLR055C YGR018CP53211 109 aa9.01□□□□□ -0.97
SPT8YLR055C ATG33Q06485 197 aa9.01□□□□□ -0.97
SPT8YLR055C PRS4P38063 326 aaPredicted RBP9□□□□□ -0.97
SPT8YLR055C TIM18Q08749 192 aa9□□□□□ -0.97
SPT8YLR055C CYC3P06182 269 aa8.99□□□□□ -0.97
SPT8YLR055C MDM10P18409 493 aa8.99□□□□□ -0.97
SPT8YLR055C VPS71Q03433 280 aa8.99□□□□□ -0.97
SPT8YLR055C YER121WP40076 114 aa8.98□□□□□ -0.97
SPT8YLR055C ATP10P18496 279 aa8.98□□□□□ -0.97
SPT8YLR055C YPI1P43587 155 aa8.98□□□□□ -0.97
SPT8YLR055C YGR017WP53210 297 aa8.98□□□□□ -0.97
SPT8YLR055C TMC1Q08422 150 aaPredicted RBP8.98□□□□□ -0.97
SPT8YLR055C YOR029WQ12243 111 aa8.98□□□□□ -0.97
SPT8YLR055C BPH1P25356 2167 aa8.98□□□□□ -0.97
SPT8YLR055C ANB1P19211 157 aa8.97□□□□□ -0.97
SPT8YLR055C YPS1P32329 569 aa8.97□□□□□ -0.97
SPT8YLR055C BET5Q03630 159 aa8.97□□□□□ -0.97
SPT8YLR055C RPL12AP0CX53 165 aaKnown RBP8.96□□□□□ -0.97
SPT8YLR055C RPL12BP0CX54 165 aa8.96□□□□□ -0.97
SPT8YLR055C LST8P41318 303 aa8.96□□□□□ -0.97
SPT8YLR055C CAB4P53332 305 aa8.96□□□□□ -0.97
SPT8YLR055C IRC25Q07951 179 aa8.96□□□□□ -0.97
SPT8YLR055C HST4P53688 370 aa8.96□□□□□ -0.98
SPT8YLR055C YML079WQ03629 201 aa8.96□□□□□ -0.98
SPT8YLR055C AYT1Q12226 474 aa8.96□□□□□ -0.98
SPT8YLR055C YMR105W-AQ8TGS8 64 aa8.96□□□□□ -0.98
SPT8YLR055C PAI3P01094 68 aa8.95□□□□□ -0.98
SPT8YLR055C RPL39P04650 51 aa8.95□□□□□ -0.98
SPT8YLR055C DAD4P69851 72 aa8.95□□□□□ -0.98
SPT8YLR055C SDH7Q04401 133 aa8.95□□□□□ -0.98
SPT8YLR055C WSC3Q12215 556 aa8.95□□□□□ -0.98
SPT8YLR055C HTL1Q9URQ5 78 aa8.95□□□□□ -0.98
SPT8YLR055C SOR1P35497 357 aaKnown RBP8.94□□□□□ -0.98
SPT8YLR055C YNL046WP53956 172 aa8.94□□□□□ -0.98
SPT8YLR055C SOR2Q07786 357 aa8.94□□□□□ -0.98
SPT8YLR055C CPR1P14832 162 aaKnown RBP8.93□□□□□ -0.98
SPT8YLR055C YMR141CP40211 102 aa8.93□□□□□ -0.98
SPT8YLR055C BNA2P47125 453 aa8.93□□□□□ -0.98
SPT8YLR055C ATG39Q06159 398 aa8.93□□□□□ -0.98
SPT8YLR055C YNL198CP40166 100 aa8.92□□□□□ -0.98
SPT8YLR055C ABM1P47146 123 aa8.92□□□□□ -0.98
SPT8YLR055C GTO3Q04806 366 aa8.92□□□□□ -0.98
SPT8YLR055C DAD1Q12248 94 aa8.92□□□□□ -0.98
SPT8YLR055C YCL042WP25572 119 aa8.91□□□□□ -0.98
SPT8YLR055C YIL012WP40551 113 aa8.91□□□□□ -0.98
SPT8YLR055C ADH6Q04894 360 aaKnown RBP8.91□□□□□ -0.98
SPT8YLR055C CTR2P38865 189 aa8.91□□□□□ -0.98
SPT8YLR055C SBH2P52871 88 aa8.91□□□□□ -0.98
SPT8YLR055C ARO2P28777 376 aaKnown RBP8.9□□□□□ -0.98
SPT8YLR055C TIR2P33890 251 aa8.9□□□□□ -0.98
SPT8YLR055C YIL014C-AQ02598 104 aa8.9□□□□□ -0.98
SPT8YLR055C SNA4Q07549 140 aa8.9□□□□□ -0.98
SPT8YLR055C SPO24Q3E752 67 aa8.9□□□□□ -0.98
SPT8YLR055C Q0297Q9ZZV8 51 aa8.9□□□□□ -0.98
SPT8YLR055C CPT1P17898 393 aa8.89□□□□□ -0.99
SPT8YLR055C APS1P35181 156 aa8.89□□□□□ -0.99
SPT8YLR055C RDL1Q12305 139 aaKnown RBP8.89□□□□□ -0.99
SPT8YLR055C YHL044WP38727 235 aa8.89□□□□□ -0.99
SPT8YLR055C PET8P38921 284 aa8.89□□□□□ -0.99
SPT8YLR055C RXT3Q07458 294 aa8.89□□□□□ -0.99
SPT8YLR055C YKR045CP36138 183 aa8.88□□□□□ -0.99
SPT8YLR055C YIL102C-AQ2V2P5 75 aa8.88□□□□□ -0.99
SPT8YLR055C YCR023CP25351 611 aa8.87□□□□□ -0.99
SPT8YLR055C YKL044WP36092 106 aa8.87□□□□□ -0.99
SPT8YLR055C ECM33P38248 429 aaKnown RBP8.87□□□□□ -0.99
SPT8YLR055C SGN1P40561 250 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
SPT8YLR055C YDR042CQ03205 200 aa8.87□□□□□ -0.99
SPT8YLR055C ISU2Q12056 156 aa8.87□□□□□ -0.99
SPT8YLR055C YCL048W-AQ2V2Q2 79 aa8.87□□□□□ -0.99
SPT8YLR055C SLO1Q3E784 85 aa8.87□□□□□ -0.99
SPT8YLR055C RPP2AP05319 106 aaKnown RBP8.87□□□□□ -0.99
SPT8YLR055C RPL27BP0C2H7 136 aaKnown RBP8.87□□□□□ -0.99
SPT8YLR055C YHR213WP0CI67 198 aa8.87□□□□□ -0.99
SPT8YLR055C RRT1P38192 103 aa8.87□□□□□ -0.99
SPT8YLR055C MBB1P39534 108 aa8.87□□□□□ -0.99
SPT8YLR055C NCA3P46955 337 aa8.87□□□□□ -0.99
SPT8YLR055C YKR032WP36127 104 aa8.86□□□□□ -0.99
SPT8YLR055C UTP23Q12339 254 aaKnown RBP8.86□□□□□ -0.99
SPT8YLR055C RPL27AP0C2H6 136 aaKnown RBP8.84□□□□□ -0.99
SPT8YLR055C HYP2P23301 157 aaKnown RBP8.84□□□□□ -0.99
SPT8YLR055C YIR020CP40575 100 aa8.84□□□□□ -0.99
SPT8YLR055C YJL213WP40896 331 aa8.84□□□□□ -0.99
SPT8YLR055C IMP2P46972 177 aa8.84□□□□□ -0.99
SPT8YLR055C RPL15BP54780 204 aaPredicted RBP8.84□□□□□ -0.99
SPT8YLR055C MRPL20P22354 195 aaPredicted RBP8.83□□□□□ -1
SPT8YLR055C ADH5P38113 351 aaKnown RBP8.83□□□□□ -1
SPT8YLR055C YJR096WP47137 282 aa8.83□□□□□ -1
SPT8YLR055C MST27P53176 234 aa8.83□□□□□ -1
SPT8YLR055C ADH1P00330 348 aaKnown RBP8.82□□□□□ -1
SPT8YLR055C YPT53P36019 220 aa8.82□□□□□ -1
SPT8YLR055C DGA1Q08650 418 aa8.82□□□□□ -1
SPT8YLR055C YJL163CP46996 555 aa8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms