RNA–Protein interactions for RNA: YKL211C

TRP3, Transcript of Indole-3-glycerol-phosphate synthase, yeast

Gene TRP3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP3	YKL211C	EOS1	P53938	366 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	MIX17	Q03667	156 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	IRC25	Q07951	179 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	RFM1	Q12192	310 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	RAD6	P06104	172 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	PIS1	P06197	220 aa	Known RBP	4.62	□□□□□ -1.67
TRP3	YKL211C	RPS16A	P0CX51	143 aa	Known RBP	4.62	□□□□□ -1.67
TRP3	YKL211C	RPS16B	P0CX52	143 aa	Known RBP	4.62	□□□□□ -1.67
TRP3	YKL211C	MRS3	P10566	314 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	CDC43	P18898	376 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	YGP1	P38616	354 aa	Known RBP	4.62	□□□□□ -1.67
TRP3	YKL211C	YFR045W	P43617	309 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	HSK3	P69852	69 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	ATG21	Q02887	496 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	YHP1	Q04116	353 aa		4.62	□□□□□ -1.67
TRP3	YKL211C	COX10	P21592	462 aa		4.61	□□□□□ -1.67
TRP3	YKL211C	CSH1	P38287	376 aa		4.61	□□□□□ -1.67
TRP3	YKL211C	SNF11	P38956	169 aa		4.61	□□□□□ -1.67
TRP3	YKL211C	SDH7	Q04401	133 aa		4.61	□□□□□ -1.67
TRP3	YKL211C	HPA2	Q06592	156 aa		4.61	□□□□□ -1.67
TRP3	YKL211C	RAF1	Q06891	181 aa		4.61	□□□□□ -1.67
TRP3	YKL211C	REC104	P33323	182 aa		4.6	□□□□□ -1.67
TRP3	YKL211C	SPC29	P33419	253 aa		4.6	□□□□□ -1.67
TRP3	YKL211C	REE1	P40893	198 aa		4.6	□□□□□ -1.67
TRP3	YKL211C	EGT2	P42835	1041 aa		4.6	□□□□□ -1.67
TRP3	YKL211C	NCA3	P46955	337 aa		4.6	□□□□□ -1.67
TRP3	YKL211C	DGA1	Q08650	418 aa		4.6	□□□□□ -1.67
TRP3	YKL211C	FZF1	P32805	299 aa		4.59	□□□□□ -1.67
TRP3	YKL211C	YIL086C	P40503	102 aa		4.59	□□□□□ -1.67
TRP3	YKL211C	TOM7	P53507	60 aa		4.59	□□□□□ -1.67
TRP3	YKL211C	YMR103C	Q04436	120 aa		4.59	□□□□□ -1.67
TRP3	YKL211C	DAD1	Q12248	94 aa		4.59	□□□□□ -1.67
TRP3	YKL211C	RPL35A	P0CX84	120 aa	Known RBP	4.58	□□□□□ -1.68
TRP3	YKL211C	RPL35B	P0CX85	120 aa	Known RBP	4.58	□□□□□ -1.68
TRP3	YKL211C	SFT2	P38166	215 aa		4.58	□□□□□ -1.68
TRP3	YKL211C	YBL071C	P38185	102 aa		4.58	□□□□□ -1.68
TRP3	YKL211C	URM1	P40554	99 aa	Predicted RBP	4.58	□□□□□ -1.68
TRP3	YKL211C	PGU1	P47180	361 aa		4.58	□□□□□ -1.68
TRP3	YKL211C	YIL014C-A	Q02598	104 aa		4.58	□□□□□ -1.68
TRP3	YKL211C	RPL27A	P0C2H6	136 aa	Known RBP	4.57	□□□□□ -1.68
TRP3	YKL211C	KRE1	P17260	313 aa		4.57	□□□□□ -1.68
TRP3	YKL211C	MRPL20	P22354	195 aa	Predicted RBP	4.57	□□□□□ -1.68
TRP3	YKL211C	YNL217W	P40152	326 aa		4.57	□□□□□ -1.68
TRP3	YKL211C	MST27	P53176	234 aa		4.57	□□□□□ -1.68
TRP3	YKL211C	MRPL19	P53875	158 aa		4.57	□□□□□ -1.68
TRP3	YKL211C	DAD4	P69851	72 aa		4.57	□□□□□ -1.68
TRP3	YKL211C	BET2	P20133	325 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	ERG8	P24521	451 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	YCR085W	P25650	117 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	MRPS5	P33759	307 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	YOX1	P34161	385 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	MRPL24	P36525	258 aa	Predicted RBP	4.56	□□□□□ -1.68
TRP3	YKL211C	GPI18	P38211	433 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	TIF34	P40217	347 aa	Known RBP	4.56	□□□□□ -1.68
TRP3	YKL211C	BNA2	P47125	453 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	HST4	P53688	370 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	SWS2	P53937	143 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	SDC1	Q03323	175 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	LSM6	Q06406	86 aa	Known RBP	4.56	□□□□□ -1.68
TRP3	YKL211C	NCE102	Q12207	173 aa	RIP-Chip data	4.56	□□□□□ -1.68	not detected
TRP3	YKL211C	YOR097C	Q12274	175 aa	Predicted RBP	4.56	□□□□□ -1.68
TRP3	YKL211C	JID1	Q12350	301 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	CDC39	P25655	2108 aa	Known RBP	4.56	□□□□□ -1.68
TRP3	YKL211C	CDC26	P14724	124 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	RPL32	P38061	130 aa	Known RBP	4.56	□□□□□ -1.68
TRP3	YKL211C	YDL186W	P48568	277 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	YIP1	P53039	248 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	MGR2	Q02889	113 aa		4.56	□□□□□ -1.68
TRP3	YKL211C	RRS1	Q08746	203 aa	Known RBP	4.56	□□□□□ -1.68
TRP3	YKL211C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
TRP3	YKL211C	STF1	P01098	86 aa		4.55	□□□□□ -1.68
TRP3	YKL211C	RPS14A	P06367	137 aa	Known RBP	4.55	□□□□□ -1.68
TRP3	YKL211C	RPA12	P32529	125 aa	Known RBP	4.55	□□□□□ -1.68
TRP3	YKL211C	RPS14B	P39516	138 aa	Known RBP	4.55	□□□□□ -1.68
TRP3	YKL211C	LST8	P41318	303 aa		4.55	□□□□□ -1.68
TRP3	YKL211C	GPI19	Q04082	140 aa		4.55	□□□□□ -1.68
TRP3	YKL211C	YOR032W-A	Q8TGS1	66 aa		4.55	□□□□□ -1.68
TRP3	YKL211C	PET8	P38921	284 aa		4.54	□□□□□ -1.68
TRP3	YKL211C	OXA1	P39952	402 aa		4.54	□□□□□ -1.68
TRP3	YKL211C	YER076C	P40049	302 aa		4.54	□□□□□ -1.68
TRP3	YKL211C	YGR018C	P53211	109 aa		4.54	□□□□□ -1.68
TRP3	YKL211C	TIM10	P87108	93 aa		4.54	□□□□□ -1.68
TRP3	YKL211C	YLR361C-A	Q3E795	98 aa		4.54	□□□□□ -1.68
TRP3	YKL211C	YLR342W-A	Q3E810	57 aa		4.54	□□□□□ -1.68
TRP3	YKL211C	YFL041W-A	Q3E817	63 aa		4.54	□□□□□ -1.68
TRP3	YKL211C	CYR1	P08678	2026 aa	Known RBP	4.53	□□□□□ -1.68
TRP3	YKL211C	PFY1	P07274	126 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	YCR022C	P25620	114 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	PCL2	P25693	308 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	YKL070W	P36087	169 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	HUA1	P40325	198 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	CIS3	P47001	227 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	UBC7	Q02159	165 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	MIX14	Q04341	121 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	API2	Q04413	109 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	FCF1	Q05498	189 aa	Predicted RBP	4.53	□□□□□ -1.68
TRP3	YKL211C	YPL261C	Q08976	102 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	YLR112W	Q12130	139 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	IGO2	Q9P305	131 aa		4.53	□□□□□ -1.68
TRP3	YKL211C	IMG2	P25642	146 aa	Predicted RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms