RNA–Protein interactions for RNA: YKL176C

LST4, Transcript of Protein possibly involved in a post-Golgi secretory pathway, yeast

Gene LST4, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LST4	YKL176C	CMC4	Q3E7A9	73 aa		0.95	□□□□□ -2.26
LST4	YKL176C	APQ12	P40532	138 aa		0.94	□□□□□ -2.26
LST4	YKL176C	FIP1	P45976	327 aa		0.94	□□□□□ -2.26
LST4	YKL176C	VAM10	Q08474	114 aa		0.94	□□□□□ -2.26
LST4	YKL176C	TMA23	Q03525	211 aa		0.94	□□□□□ -2.26
LST4	YKL176C	RPS28B	P0C0X0	67 aa	Known RBP	0.93	□□□□□ -2.26
LST4	YKL176C	MRS4	P23500	304 aa		0.93	□□□□□ -2.26
LST4	YKL176C	NSL1	Q12143	216 aa		0.93	□□□□□ -2.26
LST4	YKL176C	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.93	□□□□□ -2.26
LST4	YKL176C	PEX34	P25584	144 aa		0.93	□□□□□ -2.26
LST4	YKL176C	RME1	P32338	300 aa	Known RBP	0.93	□□□□□ -2.26
LST4	YKL176C	HSP150	P32478	413 aa		0.93	□□□□□ -2.26
LST4	YKL176C	NMA1	Q06178	401 aa	Known RBP	0.93	□□□□□ -2.26
LST4	YKL176C	YBR027C	P38220	110 aa		0.92	□□□□□ -2.26
LST4	YKL176C	FMN1	Q03778	218 aa		0.92	□□□□□ -2.26
LST4	YKL176C	YCR001W	P25347	104 aa		0.92	□□□□□ -2.26
LST4	YKL176C	BUB2	P26448	306 aa	Predicted RBP	0.92	□□□□□ -2.26
LST4	YKL176C	ECM31	P38122	312 aa		0.92	□□□□□ -2.26
LST4	YKL176C	SPT6	P23615	1451 aa	Known RBP	0.91	□□□□□ -2.26
LST4	YKL176C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.91	□□□□□ -2.26
LST4	YKL176C	YGL041W-A	P0C5N3	154 aa		0.91	□□□□□ -2.26
LST4	YKL176C	PBI2	P0CT04	75 aa	Known RBP	0.91	□□□□□ -2.26
LST4	YKL176C	DER1	P38307	211 aa		0.91	□□□□□ -2.26
LST4	YKL176C	YPD1	Q07688	167 aa		0.91	□□□□□ -2.26
LST4	YKL176C	EFG1	Q3E705	233 aa	Known RBP	0.91	□□□□□ -2.26
LST4	YKL176C	RCF2	P53721	224 aa		0.91	□□□□□ -2.26
LST4	YKL176C	YER181C	P40097	107 aa		0.9	□□□□□ -2.27
LST4	YKL176C	TY1B-BR	Q12193	1756 aa		0.9	□□□□□ -2.27
LST4	YKL176C	TY1B-GR3	Q12316	1755 aa		0.9	□□□□□ -2.27
LST4	YKL176C	TY1B-OR	Q92393	1755 aa		0.9	□□□□□ -2.27
LST4	YKL176C	RFU1	Q08003	200 aa		0.9	□□□□□ -2.27
LST4	YKL176C	SRP21	P32342	167 aa		0.89	□□□□□ -2.27
LST4	YKL176C	IPT1	P38954	527 aa		0.89	□□□□□ -2.27
LST4	YKL176C	IRC19	Q07843	230 aa		0.89	□□□□□ -2.27
LST4	YKL176C	TAO3	P40468	2376 aa		0.89	□□□□□ -2.27
LST4	YKL176C	NUP159	P40477	1460 aa		0.89	□□□□□ -2.27
LST4	YKL176C	PHO13	P19881	312 aa		0.89	□□□□□ -2.27
LST4	YKL176C	HYP2	P23301	157 aa	Known RBP	0.89	□□□□□ -2.27
LST4	YKL176C	FIG2	P25653	1609 aa		0.88	□□□□□ -2.27
LST4	YKL176C	YJL218W	P40892	196 aa	Known RBP	0.88	□□□□□ -2.27
LST4	YKL176C	GEA1	P47102	1408 aa	Predicted RBP	0.88	□□□□□ -2.27
LST4	YKL176C	PDR12	Q02785	1511 aa		0.87	□□□□□ -2.27
LST4	YKL176C	MRPL24	P36525	258 aa	Predicted RBP	0.87	□□□□□ -2.27
LST4	YKL176C	RRT7	Q07829	113 aa		0.87	□□□□□ -2.27
LST4	YKL176C	YNL122C	P53921	115 aa	Predicted RBP	0.87	□□□□□ -2.27
LST4	YKL176C	ATP19	P81451	68 aa		0.87	□□□□□ -2.27
LST4	YKL176C	ATG8	P38182	117 aa	RIP-Chip data	0.86	□□□□□ -2.27	not detected
LST4	YKL176C	RPL43A	P0CX25	92 aa	Known RBP	0.86	□□□□□ -2.27
LST4	YKL176C	RPL43B	P0CX26	92 aa		0.86	□□□□□ -2.27
LST4	YKL176C	FIG1	P38224	298 aa		0.86	□□□□□ -2.27
LST4	YKL176C	YPR153W	Q06537	140 aa		0.86	□□□□□ -2.27
LST4	YKL176C	DDR48	P18899	430 aa	Known RBP	0.84	□□□□□ -2.27
LST4	YKL176C	SED1	Q01589	338 aa		0.84	□□□□□ -2.27
LST4	YKL176C	GPI11	Q06636	219 aa		0.84	□□□□□ -2.27
LST4	YKL176C	SCS22	Q6Q595	175 aa		0.84	□□□□□ -2.27
LST4	YKL176C	HHY1	P39982	102 aa		0.84	□□□□□ -2.28
LST4	YKL176C	GPI2	P46961	280 aa		0.84	□□□□□ -2.28
LST4	YKL176C	YOR072W	Q08486	104 aa		0.84	□□□□□ -2.28
LST4	YKL176C	YHR213W-B	Q8TGK1	99 aa		0.84	□□□□□ -2.28
LST4	YKL176C	PET20	Q99373	253 aa		0.84	□□□□□ -2.28
LST4	YKL176C	ROM2	P51862	1356 aa	Known RBP	0.83	□□□□□ -2.28
LST4	YKL176C	FAS2	P19097	1887 aa	Known RBP	0.83	□□□□□ -2.28
LST4	YKL176C	TSC11	P40061	1430 aa		0.83	□□□□□ -2.28
LST4	YKL176C	HAP2	P06774	265 aa		0.83	□□□□□ -2.28
LST4	YKL176C	RIB3	Q99258	208 aa		0.83	□□□□□ -2.28
LST4	YKL176C	IQG1	Q12280	1495 aa		0.83	□□□□□ -2.28
LST4	YKL176C	UBR1	P19812	1950 aa		0.83	□□□□□ -2.28
LST4	YKL176C	EST3	Q03096	181 aa		0.82	□□□□□ -2.28
LST4	YKL176C	SEN15	Q04675	128 aa		0.82	□□□□□ -2.28
LST4	YKL176C	HFA1	P32874	2273 aa		0.82	□□□□□ -2.28
LST4	YKL176C	RPL33A	P05744	107 aa	Known RBP	0.82	□□□□□ -2.28
LST4	YKL176C	NHP6A	P11632	93 aa	Known RBP	0.82	□□□□□ -2.28
LST4	YKL176C	MGR2	Q02889	113 aa		0.82	□□□□□ -2.28
LST4	YKL176C	SMD2	Q06217	110 aa	Known RBP	0.81	□□□□□ -2.28
LST4	YKL176C	RPS22A	P0C0W1	130 aa	Known RBP	0.81	□□□□□ -2.28
LST4	YKL176C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.81	□□□□□ -2.28
LST4	YKL176C	MLP2	P40457	1679 aa		0.8	□□□□□ -2.28
LST4	YKL176C	COX5B	P00425	151 aa		0.8	□□□□□ -2.28
LST4	YKL176C	HSP12	P22943	109 aa	Known RBP	0.8	□□□□□ -2.28
LST4	YKL176C	VMA10	P48836	114 aa	Known RBP	0.8	□□□□□ -2.28
LST4	YKL176C	RAV2	Q03956	351 aa		0.8	□□□□□ -2.28
LST4	YKL176C	DIE2	P50076	525 aa		0.79	□□□□□ -2.28
LST4	YKL176C	TY2B-B	Q12491	1770 aa		0.78	□□□□□ -2.28
LST4	YKL176C	PKR1	Q03880	122 aa	Known RBP	0.78	□□□□□ -2.28
LST4	YKL176C	HUT1	Q12520	339 aa		0.78	□□□□□ -2.28
LST4	YKL176C	MHF1	Q3E835	90 aa		0.78	□□□□□ -2.28
LST4	YKL176C	YGL014C-A	P0C5N1	53 aa		0.77	□□□□□ -2.29
LST4	YKL176C	CDC39	P25655	2108 aa	Known RBP	0.77	□□□□□ -2.29
LST4	YKL176C	IPI1	P38803	334 aa	Predicted RBP	0.77	□□□□□ -2.29
LST4	YKL176C	PET54	P10834	293 aa		0.77	□□□□□ -2.29
LST4	YKL176C	ARC19	P33204	171 aa	Known RBP	0.77	□□□□□ -2.29
LST4	YKL176C	YCL001W-A	P87012	153 aa		0.77	□□□□□ -2.29
LST4	YKL176C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.77	□□□□□ -2.29
LST4	YKL176C	FYV5	P25585	152 aa		0.76	□□□□□ -2.29
LST4	YKL176C	SRL3	P36167	246 aa		0.76	□□□□□ -2.29
LST4	YKL176C	YAP3	P38749	330 aa		0.76	□□□□□ -2.29
LST4	YKL176C	IRC21	Q04772	201 aa		0.76	□□□□□ -2.29
LST4	YKL176C	FLO1	P32768	1537 aa		0.76	□□□□□ -2.29
LST4	YKL176C	RPS1B	P23248	255 aa	Known RBP	0.76	□□□□□ -2.29
LST4	YKL176C	YGR201C	P42936	225 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms