RNA–Protein interactions for RNA: YJL089W

SIP4, Transcript of C6 zinc cluster transcriptional activator, yeast

Gene SIP4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP4	YJL089W	HMX1	P32339	317 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	YPT10	P38146	199 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	LSM2	P38203	95 aa	Known RBP	0.83	□□□□□ -2.28
SIP4	YJL089W	YBR013C	P38215	129 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	GAT4	P40569	121 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	MOG1	P47123	218 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	YPS5	P53057	165 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	YGL117W	P53133	265 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	ATP19	P81451	68 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	ARR3	Q06598	404 aa		0.83	□□□□□ -2.28
SIP4	YJL089W	RTC6	O14464	93 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	Q0255	P03881	472 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	TIR1	P10863	254 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	GCN3	P14741	305 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	SEC59	P20048	519 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	SPO13	P23624	291 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	YCR001W	P25347	104 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	RPS2	P25443	254 aa	Known RBP	0.82	□□□□□ -2.28
SIP4	YJL089W	POF1	P25576	258 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	CDC50	P25656	391 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	MRPL28	P36527	147 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	EMC5	P40540	141 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	LOC1	P43586	204 aa	Predicted RBP	0.82	□□□□□ -2.28
SIP4	YJL089W	TAD2	P47058	250 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	DSK2	P48510	373 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	PAU4	P53427	120 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	AIM34	Q03673	198 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	SDO1	Q07953	250 aa	Known RBP	0.82	□□□□□ -2.28
SIP4	YJL089W	YOR105W	Q08504	108 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	YLR125W	Q12138	136 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	DAD1	Q12248	94 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	MRP2	P10663	115 aa	Predicted RBP	0.82	□□□□□ -2.28
SIP4	YJL089W	SRP21	P32342	167 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	MIX23	P38162	196 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	TRS20	P38334	175 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	TEM1	P38987	245 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	SUR2	P38992	349 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	KRE9	P39005	276 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	YJL028W	P47062	111 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	YJR111C	P47148	283 aa	Known RBP	0.82	□□□□□ -2.28
SIP4	YJL089W	TIM22	Q12328	207 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	SME1	Q12330	94 aa	Predicted RBP	0.82	□□□□□ -2.28
SIP4	YJL089W	COX19	Q3E731	98 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	YBR200W-A	Q3E755	54 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	PCC1	Q3E833	88 aa		0.82	□□□□□ -2.28
SIP4	YJL089W	YBR085C-A	O43137	85 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	RPL33A	P05744	107 aa	Known RBP	0.81	□□□□□ -2.28
SIP4	YJL089W	PAU1	P0CE88	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU14	P0CE89	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU6	P0CE90	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU18	P0CE91	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU8	P0CE92	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU11	P0CE93	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	FRS1	P15624	595 aa	Known RBP	0.81	□□□□□ -2.28
SIP4	YJL089W	ANB1	P19211	157 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	RPL16B	P26785	198 aa	Known RBP	0.81	□□□□□ -2.28
SIP4	YJL089W	AGA1	P32323	725 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	MRP49	P32388	137 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU13	P38725	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	ERG28	P40030	148 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	RRT13	P40042	185 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	YNL217W	P40152	326 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	RPL33B	P41056	107 aa	Known RBP	0.81	□□□□□ -2.28
SIP4	YJL089W	YGR025W	P53216	100 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	YGR026W	P53217	278 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	ATP23	P53722	227 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	DIA1	P54005	336 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	DAD4	P69851	72 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PMP3	P87284	55 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU10	Q03050	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU20	Q08322	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PAU9	Q3E770	120 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	YMR122W-A	Q3E842	84 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	RPL42A	P0CX27	106 aa	Known RBP	0.81	□□□□□ -2.28
SIP4	YJL089W	RPL42B	P0CX28	106 aa	Known RBP	0.81	□□□□□ -2.28
SIP4	YJL089W	CUP2	P15315	225 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	YCR023C	P25351	611 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	LDS1	P31379	325 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	MSK1	P32048	576 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PHS1	P40857	217 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	CDC40	P40968	455 aa	Predicted RBP	0.81	□□□□□ -2.28
SIP4	YJL089W	YFR045W	P43617	309 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	UBC12	P52491	188 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	MGA1	P53050	456 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	TOM7	P53507	60 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	ADD37	Q03233	198 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	BET5	Q03630	159 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	RAV2	Q03956	351 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	PBA1	Q05778	276 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	YOR015W	Q12169	119 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	YLL066W-B	Q8TGJ7	56 aa		0.81	□□□□□ -2.28
SIP4	YJL089W	RPL27A	P0C2H6	136 aa	Known RBP	0.8	□□□□□ -2.28
SIP4	YJL089W	HMRA1	P0CY11	126 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	UBC5	P15732	148 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	QRI5	P32344	111 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	KTI12	P34253	313 aa	Known RBP	0.8	□□□□□ -2.28
SIP4	YJL089W	MRPS9	P38120	278 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	YHR140W	P38842	239 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	HSP10	P38910	106 aa		0.8	□□□□□ -2.28
SIP4	YJL089W	PAU7	P39545	55 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms