RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W PST2Q12335 198 aaKnown RBP1.22□□□□□ -2.21
MSL1YIR009W YDR524C-BQ3E6R4 66 aa1.22□□□□□ -2.21
MSL1YIR009W BOL1Q3E793 110 aa1.22□□□□□ -2.21
MSL1YIR009W CDC39P25655 2108 aaKnown RBP1.22□□□□□ -2.21
MSL1YIR009W PHO13P19881 312 aa1.21□□□□□ -2.22
MSL1YIR009W YEL073CP39974 107 aa1.21□□□□□ -2.22
MSL1YIR009W YEL067CP39978 195 aa1.21□□□□□ -2.22
MSL1YIR009W YER181CP40097 107 aa1.21□□□□□ -2.22
MSL1YIR009W HHO1P53551 258 aa1.21□□□□□ -2.22
MSL1YIR009W YNR064CP53750 290 aa1.21□□□□□ -2.22
MSL1YIR009W YMR320WQ04897 101 aa1.21□□□□□ -2.22
MSL1YIR009W YHR007C-AQ07074 71 aa1.21□□□□□ -2.22
MSL1YIR009W QCR8P08525 94 aa1.2□□□□□ -2.22
MSL1YIR009W STF2P16965 84 aa1.2□□□□□ -2.22
MSL1YIR009W PHO85P17157 305 aa1.2□□□□□ -2.22
MSL1YIR009W SRP21P32342 167 aa1.2□□□□□ -2.22
MSL1YIR009W TMA19P35691 167 aaKnown RBP1.2□□□□□ -2.22
MSL1YIR009W AYR1P40471 297 aa1.2□□□□□ -2.22
MSL1YIR009W THG1P53215 237 aaKnown RBP1.2□□□□□ -2.22
MSL1YIR009W EST3Q03096 181 aa1.2□□□□□ -2.22
MSL1YIR009W DML1Q03652 475 aa1.2□□□□□ -2.22
MSL1YIR009W YOR015WQ12169 119 aa1.2□□□□□ -2.22
MSL1YIR009W YOR381W-AQ3E804 55 aa1.2□□□□□ -2.22
MSL1YIR009W MDM35O60200 86 aa1.19□□□□□ -2.22
MSL1YIR009W MRPL24P36525 258 aaPredicted RBP1.19□□□□□ -2.22
MSL1YIR009W NSE4P43124 402 aa1.19□□□□□ -2.22
MSL1YIR009W GPI2P46961 280 aa1.19□□□□□ -2.22
MSL1YIR009W RBL2P48606 106 aaKnown RBP1.19□□□□□ -2.22
MSL1YIR009W COF1Q03048 143 aaKnown RBP1.19□□□□□ -2.22
MSL1YIR009W YDR278CQ05612 105 aa1.19□□□□□ -2.22
MSL1YIR009W CSI2Q08054 341 aa1.19□□□□□ -2.22
MSL1YIR009W SPC3Q12133 184 aa1.19□□□□□ -2.22
MSL1YIR009W YLR361C-AQ3E795 98 aa1.19□□□□□ -2.22
MSL1YIR009W PMD1P32634 1753 aa1.19□□□□□ -2.22
MSL1YIR009W POL2P21951 2222 aaKnown RBP1.18□□□□□ -2.22
MSL1YIR009W YOL162WP0CF19 215 aa1.18□□□□□ -2.22
MSL1YIR009W SEN2P16658 377 aa1.18□□□□□ -2.22
MSL1YIR009W SUI1P32911 108 aaKnown RBP1.18□□□□□ -2.22
MSL1YIR009W DAD4P69851 72 aa1.18□□□□□ -2.22
MSL1YIR009W YDR366CP87287 132 aa1.18□□□□□ -2.22
MSL1YIR009W YDR102CQ03864 110 aa1.18□□□□□ -2.22
MSL1YIR009W YHP1Q04116 353 aa1.18□□□□□ -2.22
MSL1YIR009W YPR114WQ06107 315 aa1.18□□□□□ -2.22
MSL1YIR009W YLR162WQ06235 118 aa1.18□□□□□ -2.22
MSL1YIR009W YPD1Q07688 167 aa1.18□□□□□ -2.22
MSL1YIR009W YDL241WQ07738 123 aa1.18□□□□□ -2.22
MSL1YIR009W RFU1Q08003 200 aa1.18□□□□□ -2.22
MSL1YIR009W FCY1Q12178 158 aa1.18□□□□□ -2.22
MSL1YIR009W BEM2P39960 2167 aaKnown RBP1.18□□□□□ -2.22
MSL1YIR009W GPA2P10823 449 aa1.17□□□□□ -2.22
MSL1YIR009W MRS4P23500 304 aa1.17□□□□□ -2.22
MSL1YIR009W SUA7P29055 345 aaPredicted RBP1.17□□□□□ -2.22
MSL1YIR009W PRS3P38689 320 aaKnown RBP1.17□□□□□ -2.22
MSL1YIR009W YGR269WP40326 108 aa1.17□□□□□ -2.22
MSL1YIR009W PHB1P40961 287 aa1.17□□□□□ -2.22
MSL1YIR009W ALB1P47019 175 aaPredicted RBP1.17□□□□□ -2.22
MSL1YIR009W UBC7Q02159 165 aa1.17□□□□□ -2.22
MSL1YIR009W YML079WQ03629 201 aa1.17□□□□□ -2.22
MSL1YIR009W FMN1Q03778 218 aa1.17□□□□□ -2.22
MSL1YIR009W ELP6Q04868 273 aa1.17□□□□□ -2.22
MSL1YIR009W RRT7Q07829 113 aa1.17□□□□□ -2.22
MSL1YIR009W YDL157CQ12082 118 aa1.17□□□□□ -2.22
MSL1YIR009W BRR2P32639 2163 aaKnown RBP1.17□□□□□ -2.22
MSL1YIR009W MDN1Q12019 4910 aaKnown RBP1.16□□□□□ -2.22
MSL1YIR009W TRA1P38811 3744 aa1.16□□□□□ -2.22
MSL1YIR009W HSP12P22943 109 aaKnown RBP1.16□□□□□ -2.22
MSL1YIR009W AHT1P29589 182 aa1.16□□□□□ -2.22
MSL1YIR009W YPT31P38555 223 aaKnown RBP1.16□□□□□ -2.22
MSL1YIR009W YHR140WP38842 239 aa1.16□□□□□ -2.22
MSL1YIR009W CCS1P40202 249 aaKnown RBP1.16□□□□□ -2.22
MSL1YIR009W MPM1P40364 252 aa1.16□□□□□ -2.22
MSL1YIR009W CIN5P40917 295 aa1.16□□□□□ -2.22
MSL1YIR009W GEP7P53171 287 aa1.16□□□□□ -2.22
MSL1YIR009W YGR039WP53225 103 aa1.16□□□□□ -2.22
MSL1YIR009W MET31Q03081 177 aa1.16□□□□□ -2.22
MSL1YIR009W CSN9Q03981 162 aa1.16□□□□□ -2.22
MSL1YIR009W ATG10Q07879 167 aa1.16□□□□□ -2.22
MSL1YIR009W YMR030W-AQ3E760 96 aa1.16□□□□□ -2.22
MSL1YIR009W HKR1P41809 1802 aa1.15□□□□□ -2.22
MSL1YIR009W SPS2P08459 502 aa1.15□□□□□ -2.23
MSL1YIR009W YGL041W-AP0C5N3 154 aa1.15□□□□□ -2.23
MSL1YIR009W RPB7P34087 171 aa1.15□□□□□ -2.23
MSL1YIR009W YRA2P36036 203 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
MSL1YIR009W HYR1P40581 163 aaKnown RBP1.15□□□□□ -2.23
MSL1YIR009W PAC10P48363 199 aa1.15□□□□□ -2.23
MSL1YIR009W AVO2Q04749 426 aa1.15□□□□□ -2.23
MSL1YIR009W NHP6AP11632 93 aaKnown RBP1.14□□□□□ -2.23
MSL1YIR009W DDR48P18899 430 aaKnown RBP1.14□□□□□ -2.23
MSL1YIR009W RPS20P38701 121 aaKnown RBP1.14□□□□□ -2.23
MSL1YIR009W RPL13BP40212 199 aaKnown RBP1.14□□□□□ -2.23
MSL1YIR009W EMC4P53073 190 aa1.14□□□□□ -2.23
MSL1YIR009W RCF2P53721 224 aa1.14□□□□□ -2.23
MSL1YIR009W RCE1Q03530 315 aa1.14□□□□□ -2.23
MSL1YIR009W KEI1Q06346 221 aa1.14□□□□□ -2.23
MSL1YIR009W RPL13AQ12690 199 aaPredicted RBP1.14□□□□□ -2.23
MSL1YIR009W YNL277W-AQ3E7Z0 62 aa1.14□□□□□ -2.23
MSL1YIR009W YNL146C-AQ3E7Z1 64 aa1.14□□□□□ -2.23
MSL1YIR009W DYN1P36022 4092 aa1.14□□□□□ -2.23
MSL1YIR009W INO4P13902 151 aa1.13□□□□□ -2.23
MSL1YIR009W YEL008WP40001 126 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 93.9 ms