RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	ATG39	Q06159	398 aa		2.71	□□□□□ -1.98
YPT35	YHR105W	RFU1	Q08003	200 aa		2.71	□□□□□ -1.98
YPT35	YHR105W	SLO1	Q3E784	85 aa		2.71	□□□□□ -1.98
YPT35	YHR105W	FMP49	A0A023PZB3	126 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	PAI3	P01094	68 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	RPS22A	P0C0W1	130 aa	Known RBP	2.7	□□□□□ -1.98
YPT35	YHR105W	YPR170W-B	P0C5R9	85 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	QCR9	P22289	66 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	MRP49	P32388	137 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	SPS18	P32572	300 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	GSP1	P32835	219 aa	Known RBP	2.7	□□□□□ -1.98
YPT35	YHR105W	GSP2	P32836	220 aa	Known RBP	2.7	□□□□□ -1.98
YPT35	YHR105W	YKL102C	P34249	101 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	SHB17	P36136	271 aa	Known RBP	2.7	□□□□□ -1.98
YPT35	YHR105W	RPA43	P46669	326 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	PET191	Q02772	108 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	CGI121	Q03705	181 aa	Known RBP	2.7	□□□□□ -1.98
YPT35	YHR105W	NAT3	Q06504	195 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	YOR105W	Q08504	108 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	VPS68	Q12016	184 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	SMT3	Q12306	101 aa	Known RBP	2.7	□□□□□ -1.98
YPT35	YHR105W	COA2	Q3E823	68 aa		2.7	□□□□□ -1.98
YPT35	YHR105W	YBR121C-A	P0C5L4	52 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	RPS23A	P0CX29	145 aa	Known RBP	2.69	□□□□□ -1.98
YPT35	YHR105W	RPS23B	P0CX30	145 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	MRS4	P23500	304 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	MIG1	P27705	504 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	AHT1	P29589	182 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	LSM2	P38203	95 aa	Known RBP	2.69	□□□□□ -1.98
YPT35	YHR105W	FIG1	P38224	298 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	COX15	P40086	486 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	YER188W	P40103	239 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	GPI2	P46961	280 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	BRR6	P53062	197 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	YML079W	Q03629	201 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	YPL162C	Q12042	273 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	YDL157C	Q12082	118 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	YLR050C	Q12155	161 aa	Known RBP	2.69	□□□□□ -1.98
YPT35	YHR105W	RPS22B	Q3E7Y3	130 aa	Known RBP	2.69	□□□□□ -1.98
YPT35	YHR105W	YBL008W-A	Q3E821	79 aa		2.69	□□□□□ -1.98
YPT35	YHR105W	YBR220C	P38318	560 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	YHR180W	P38868	163 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	TEM1	P38987	245 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	YER134C	P40081	178 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	MSL1	P40567	111 aa	Predicted RBP	2.68	□□□□□ -1.98
YPT35	YHR105W	YGL230C	P53074	147 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	YNR064C	P53750	290 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	YML096W	Q04489	525 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	YLR363W-A	Q3E747	85 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	ATG40	Q99325	256 aa		2.68	□□□□□ -1.98
YPT35	YHR105W	SEC4	P07560	215 aa	Known RBP	2.67	□□□□□ -1.98
YPT35	YHR105W	SCO1	P23833	295 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	OCH1	P31755	480 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	MRPL39	P36533	70 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	SEC72	P39742	193 aa	Known RBP	2.67	□□□□□ -1.98
YPT35	YHR105W	CYB5	P40312	120 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	NCE101	Q02820	53 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	PRP11	Q07350	266 aa	Predicted RBP	2.67	□□□□□ -1.98
YPT35	YHR105W	IRC19	Q07843	230 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	YLR365W	Q7LIF2	110 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	Q0144	Q9ZZW2	109 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	FLO9	P39712	1322 aa		2.67	□□□□□ -1.98
YPT35	YHR105W	CCH1	P50077	2039 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	MBF1	O14467	151 aa	Known RBP	2.66	□□□□□ -1.98
YPT35	YHR105W	FCY2	P17064	533 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	FYV4	P38783	130 aa	Predicted RBP	2.66	□□□□□ -1.98
YPT35	YHR105W	ECO1	P43605	281 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	GEP7	P53171	287 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	CAB4	P53332	305 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	ELC1	Q03071	99 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	YMR007W	Q03675	126 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	GRH1	Q04410	372 aa	Known RBP	2.66	□□□□□ -1.98
YPT35	YHR105W	RIM9	Q04734	239 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	HRD1	Q08109	551 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	FSF1	Q12029	327 aa	Known RBP	2.66	□□□□□ -1.98
YPT35	YHR105W	MCP1	Q12106	302 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	YOR343C	Q12484	108 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	YDR524C-B	Q3E6R4	66 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	ISD11	Q6Q560	94 aa		2.66	□□□□□ -1.98
YPT35	YHR105W	HMRA1	P0CY11	126 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	TIR1	P10863	254 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	SEC11	P15367	167 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	PAM17	P36147	197 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	YKR070W	P36151	352 aa	Known RBP	2.65	□□□□□ -1.99
YPT35	YHR105W	DER1	P38307	211 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	PEX17	P40155	199 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	YGR269W	P40326	108 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	YIL059C	P40520	121 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	ARP3	P47117	449 aa	Known RBP	2.65	□□□□□ -1.99
YPT35	YHR105W	MIC27	P50945	234 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	GEP5	Q12393	293 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	WIP1	Q2V2P8	89 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	YPR108W-A	Q3E7B3	70 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	HUG1	Q6Q5K6	68 aa		2.65	□□□□□ -1.99
YPT35	YHR105W	YSF3	P0C074	85 aa	Predicted RBP	2.64	□□□□□ -1.99
YPT35	YHR105W	SRP21	P32342	167 aa		2.64	□□□□□ -1.99
YPT35	YHR105W	RPB7	P34087	171 aa		2.64	□□□□□ -1.99
YPT35	YHR105W	MSA2	P36157	363 aa		2.64	□□□□□ -1.99
YPT35	YHR105W	DOG2	P38773	246 aa		2.64	□□□□□ -1.99
YPT35	YHR105W	ECM14	P38836	430 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms