RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	PRM7	Q12459	698 aa		4.22	□□□□□ -1.73
SHE10	YGL228W	YOR011W-A	Q3E807	68 aa		4.22	□□□□□ -1.73
SHE10	YGL228W	YGR035W-A	Q45U48	73 aa		4.22	□□□□□ -1.73
SHE10	YGL228W	RPL31B	P0C2H9	113 aa	Known RBP	4.21	□□□□□ -1.73
SHE10	YGL228W	DAD2	P36162	133 aa		4.21	□□□□□ -1.73
SHE10	YGL228W	SIM1	P40472	476 aa		4.21	□□□□□ -1.73
SHE10	YGL228W	MRPL49	P40858	161 aa	Predicted RBP	4.21	□□□□□ -1.73
SHE10	YGL228W	YDL183C	P48569	320 aa		4.21	□□□□□ -1.73
SHE10	YGL228W	YOR105W	Q08504	108 aa		4.21	□□□□□ -1.73
SHE10	YGL228W	YNR034W-A	Q3E841	98 aa		4.21	□□□□□ -1.73
SHE10	YGL228W	MRPL20	P22354	195 aa	Predicted RBP	4.21	□□□□□ -1.74
SHE10	YGL228W	MIX23	P38162	196 aa		4.21	□□□□□ -1.74
SHE10	YGL228W	AME1	P38313	324 aa		4.21	□□□□□ -1.74
SHE10	YGL228W	GEP3	Q08622	556 aa		4.21	□□□□□ -1.74
SHE10	YGL228W	PAU19	P0CE85	124 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	PAU21	P0CE86	164 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	PAU22	P0CE87	164 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	PAU3	P25610	124 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	YKL102C	P34249	101 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	PRE5	P40302	234 aa	Known RBP	4.2	□□□□□ -1.74
SHE10	YGL228W	YFR045W	P43617	309 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	TDA4	P47153	279 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	YIP3	P53633	176 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	GIM5	Q04493	163 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	IZH3	Q07959	543 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	DAD1	Q12248	94 aa		4.2	□□□□□ -1.74
SHE10	YGL228W	MRPL31	P14063	131 aa	Predicted RBP	4.19	□□□□□ -1.74
SHE10	YGL228W	SPI1	P40092	148 aa		4.19	□□□□□ -1.74
SHE10	YGL228W	RRG8	Q06109	277 aa		4.19	□□□□□ -1.74
SHE10	YGL228W	ATP16	Q12165	160 aa		4.19	□□□□□ -1.74
SHE10	YGL228W	UTR5	P32630	166 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	DUT1	P33317	147 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	RPB11	P38902	120 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	YGL185C	P53100	379 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	TRI1	Q05024	226 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	YNL146C-A	Q3E7Z1	64 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	YLR342W-A	Q3E810	57 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	YOL085C	Q99345	113 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	POR1	P04840	283 aa	Known RBP	4.18	□□□□□ -1.74
SHE10	YGL228W	HMRA1	P0CY11	126 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	YBR144C	P34215	104 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	YHR022C	P38763	256 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	YER135C	P40082	130 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	MIC26	P50087	233 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	ARL3	Q02804	198 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	YDR215C	Q12240	137 aa		4.18	□□□□□ -1.74
SHE10	YGL228W	ECM33	P38248	429 aa	Known RBP	4.17	□□□□□ -1.74
SHE10	YGL228W	YMR244W	Q04018	355 aa		4.17	□□□□□ -1.74
SHE10	YGL228W	YCR024C-B	Q3E7Z8	88 aa		4.17	□□□□□ -1.74
SHE10	YGL228W	CPT1	P17898	393 aa		4.16	□□□□□ -1.74
SHE10	YGL228W	MIG3	P39943	394 aa		4.16	□□□□□ -1.74
SHE10	YGL228W	IRC22	P40006	225 aa		4.16	□□□□□ -1.74
SHE10	YGL228W	YGR149W	P48236	432 aa		4.16	□□□□□ -1.74
SHE10	YGL228W	SDS23	P53172	527 aa		4.16	□□□□□ -1.74
SHE10	YGL228W	YGR017W	P53210	297 aa		4.16	□□□□□ -1.74
SHE10	YGL228W	CCW12	Q12127	133 aa		4.16	□□□□□ -1.74
SHE10	YGL228W	MSN1	P22148	382 aa		4.15	□□□□□ -1.74
SHE10	YGL228W	MIG1	P27705	504 aa		4.15	□□□□□ -1.74
SHE10	YGL228W	MPC2	P38857	129 aa		4.15	□□□□□ -1.74
SHE10	YGL228W	SUR2	P38992	349 aa		4.15	□□□□□ -1.74
SHE10	YGL228W	YFR035C	P43608	114 aa		4.15	□□□□□ -1.74
SHE10	YGL228W	CYT2	Q00873	224 aa		4.15	□□□□□ -1.74
SHE10	YGL228W	SEC4	P07560	215 aa	Known RBP	4.15	□□□□□ -1.75
SHE10	YGL228W	MDM10	P18409	493 aa		4.15	□□□□□ -1.75
SHE10	YGL228W	MRPL28	P36527	147 aa		4.15	□□□□□ -1.75
SHE10	YGL228W	ALG13	P53178	202 aa		4.15	□□□□□ -1.75
SHE10	YGL228W	THG1	P53215	237 aa	Known RBP	4.15	□□□□□ -1.75
SHE10	YGL228W	MRPS8	Q03799	155 aa		4.15	□□□□□ -1.75
SHE10	YGL228W	CSM4	Q08955	156 aa		4.15	□□□□□ -1.75
SHE10	YGL228W	TIM22	Q12328	207 aa		4.15	□□□□□ -1.75
SHE10	YGL228W	UTP23	Q12339	254 aa	Known RBP	4.15	□□□□□ -1.75
SHE10	YGL228W	DUO1	P53168	247 aa	Known RBP	4.14	□□□□□ -1.75
SHE10	YGL228W	VPS71	Q03433	280 aa		4.14	□□□□□ -1.75
SHE10	YGL228W	GRH1	Q04410	372 aa	Known RBP	4.14	□□□□□ -1.75
SHE10	YGL228W	ARC18	Q05933	178 aa	Known RBP	4.14	□□□□□ -1.75
SHE10	YGL228W	ATG33	Q06485	197 aa		4.14	□□□□□ -1.75
SHE10	YGL228W	YPL162C	Q12042	273 aa		4.14	□□□□□ -1.75
SHE10	YGL228W	RPL23A	P0CX41	137 aa	Known RBP	4.13	□□□□□ -1.75
SHE10	YGL228W	RPL23B	P0CX42	137 aa	Known RBP	4.13	□□□□□ -1.75
SHE10	YGL228W	RPL12A	P0CX53	165 aa	Known RBP	4.13	□□□□□ -1.75
SHE10	YGL228W	RPL12B	P0CX54	165 aa		4.13	□□□□□ -1.75
SHE10	YGL228W	VMA16	P23968	213 aa		4.13	□□□□□ -1.75
SHE10	YGL228W	PAU7	P39545	55 aa		4.13	□□□□□ -1.75
SHE10	YGL228W	YJR096W	P47137	282 aa		4.13	□□□□□ -1.75
SHE10	YGL228W	YDR274C	P87283	123 aa		4.13	□□□□□ -1.75
SHE10	YGL228W	UPS3	Q04006	179 aa		4.13	□□□□□ -1.75
SHE10	YGL228W	SEN15	Q04675	128 aa		4.13	□□□□□ -1.75
SHE10	YGL228W	GTO3	Q04806	366 aa		4.13	□□□□□ -1.75
SHE10	YGL228W	FSF1	Q12029	327 aa	Known RBP	4.13	□□□□□ -1.75
SHE10	YGL228W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.13	□□□□□ -1.75
SHE10	YGL228W	VAR1	P02381	398 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	AGA1	P32323	725 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	ZRT1	P32804	376 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	SSS1	P35179	80 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	SDH8	P38345	138 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	GPI19	Q04082	140 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	DXO1	Q06349	442 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	DIA1	P54005	336 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	YPR063C	Q12160	140 aa		4.12	□□□□□ -1.75
SHE10	YGL228W	RPL27A	P0C2H6	136 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 93.1 ms