RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W NRG2P38082 220 aa2.72□□□□□ -1.97
USE1YGL098W OM14P38325 134 aa2.72□□□□□ -1.97
USE1YGL098W YHL042WP38729 150 aa2.72□□□□□ -1.97
USE1YGL098W TIM17P39515 158 aa2.72□□□□□ -1.97
USE1YGL098W MRPL49P40858 161 aaPredicted RBP2.72□□□□□ -1.97
USE1YGL098W YPI1P43587 155 aa2.72□□□□□ -1.97
USE1YGL098W SKI6P46948 246 aaPredicted RBP2.72□□□□□ -1.97
USE1YGL098W SUN4P53616 420 aa2.72□□□□□ -1.97
USE1YGL098W MRX11Q03079 207 aa2.72□□□□□ -1.97
USE1YGL098W YHM2Q04013 314 aa2.72□□□□□ -1.97
USE1YGL098W RRG8Q06109 277 aa2.72□□□□□ -1.97
USE1YGL098W LSM6Q06406 86 aaKnown RBP2.72□□□□□ -1.97
USE1YGL098W MIM1Q08176 113 aa2.72□□□□□ -1.97
USE1YGL098W YOR186WQ08560 144 aa2.72□□□□□ -1.97
USE1YGL098W YOR292CQ08743 309 aa2.72□□□□□ -1.97
USE1YGL098W TIM18Q08749 192 aa2.72□□□□□ -1.97
USE1YGL098W DAD1Q12248 94 aa2.72□□□□□ -1.97
USE1YGL098W YDR119W-AQ2V2P9 66 aa2.72□□□□□ -1.97
USE1YGL098W YLR412C-AQ3E742 68 aa2.72□□□□□ -1.97
USE1YGL098W HUG1Q6Q5K6 68 aa2.72□□□□□ -1.97
USE1YGL098W YLR302CO13544 120 aa2.71□□□□□ -1.98
USE1YGL098W TRP1P00912 224 aa2.71□□□□□ -1.98
USE1YGL098W PBI2P0CT04 75 aaKnown RBP2.71□□□□□ -1.98
USE1YGL098W HSP12P22943 109 aaKnown RBP2.71□□□□□ -1.98
USE1YGL098W SRX1P36077 127 aa2.71□□□□□ -1.98
USE1YGL098W ADH5P38113 351 aaKnown RBP2.71□□□□□ -1.98
USE1YGL098W YHR173CP38864 112 aa2.71□□□□□ -1.98
USE1YGL098W OST1P41543 476 aaKnown RBP2.71□□□□□ -1.98
USE1YGL098W ALG13P53178 202 aa2.71□□□□□ -1.98
USE1YGL098W YGR050CP53231 118 aa2.71□□□□□ -1.98
USE1YGL098W YIL014C-AQ02598 104 aa2.71□□□□□ -1.98
USE1YGL098W PIR1Q03178 341 aa2.71□□□□□ -1.98
USE1YGL098W YDR042CQ03205 200 aa2.71□□□□□ -1.98
USE1YGL098W YLR042CQ07990 161 aa2.71□□□□□ -1.98
USE1YGL098W MCH4Q08268 501 aa2.71□□□□□ -1.98
USE1YGL098W YOR097CQ12274 175 aaPredicted RBP2.71□□□□□ -1.98
USE1YGL098W YPS3Q12303 508 aa2.71□□□□□ -1.98
USE1YGL098W YHR139C-AO13536 103 aa2.7□□□□□ -1.98
USE1YGL098W YCR006CP25350 157 aa2.7□□□□□ -1.98
USE1YGL098W YCR050CP25630 102 aa2.7□□□□□ -1.98
USE1YGL098W FUB1P25659 250 aa2.7□□□□□ -1.98
USE1YGL098W RFA2P26754 273 aaKnown RBP2.7□□□□□ -1.98
USE1YGL098W CSH1P38287 376 aa2.7□□□□□ -1.98
USE1YGL098W YHR140WP38842 239 aa2.7□□□□□ -1.98
USE1YGL098W YNL217WP40152 326 aa2.7□□□□□ -1.98
USE1YGL098W YFR057WP43625 151 aa2.7□□□□□ -1.98
USE1YGL098W RHO5P53879 331 aaKnown RBP2.7□□□□□ -1.98
USE1YGL098W SDC1Q03323 175 aa2.7□□□□□ -1.98
USE1YGL098W YMR103CQ04436 120 aa2.7□□□□□ -1.98
USE1YGL098W YMR320WQ04897 101 aa2.7□□□□□ -1.98
USE1YGL098W RLM1Q12224 676 aa2.7□□□□□ -1.98
USE1YGL098W SUT2Q12286 268 aa2.7□□□□□ -1.98
USE1YGL098W YBR255C-AQ3E776 120 aa2.7□□□□□ -1.98
USE1YGL098W YMR316C-AI2HB70 103 aa2.69□□□□□ -1.98
USE1YGL098W VPS63O13549 108 aa2.69□□□□□ -1.98
USE1YGL098W MDM35O60200 86 aa2.69□□□□□ -1.98
USE1YGL098W RPL20AP0CX23 172 aaKnown RBP2.69□□□□□ -1.98
USE1YGL098W RPL20BP0CX24 172 aaPredicted RBP2.69□□□□□ -1.98
USE1YGL098W MRPL31P14063 131 aaPredicted RBP2.69□□□□□ -1.98
USE1YGL098W ARF2P19146 181 aaKnown RBP2.69□□□□□ -1.98
USE1YGL098W IMP1P28627 190 aa2.69□□□□□ -1.98
USE1YGL098W FZF1P32805 299 aa2.69□□□□□ -1.98
USE1YGL098W KTI12P34253 313 aaKnown RBP2.69□□□□□ -1.98
USE1YGL098W SFT2P38166 215 aa2.69□□□□□ -1.98
USE1YGL098W GPI18P38211 433 aa2.69□□□□□ -1.98
USE1YGL098W YHL018WP38744 120 aaPredicted RBP2.69□□□□□ -1.98
USE1YGL098W YNL194CP40169 301 aa2.69□□□□□ -1.98
USE1YGL098W LTP1P40347 161 aa2.69□□□□□ -1.98
USE1YGL098W LST8P41318 303 aa2.69□□□□□ -1.98
USE1YGL098W FIP1P45976 327 aa2.69□□□□□ -1.98
USE1YGL098W HNT2P49775 206 aa2.69□□□□□ -1.98
USE1YGL098W YGR164WP53291 111 aa2.69□□□□□ -1.98
USE1YGL098W HST4P53688 370 aa2.69□□□□□ -1.98
USE1YGL098W TIM10P87108 93 aa2.69□□□□□ -1.98
USE1YGL098W ROT1Q03691 256 aa2.69□□□□□ -1.98
USE1YGL098W GPI19Q04082 140 aa2.69□□□□□ -1.98
USE1YGL098W USV1Q12132 391 aa2.69□□□□□ -1.98
USE1YGL098W YKL183C-AQ3E765 70 aa2.69□□□□□ -1.98
USE1YGL098W BOL1Q3E793 110 aa2.69□□□□□ -1.98
USE1YGL098W YPL038W-AQ3E7B4 63 aa2.69□□□□□ -1.98
USE1YGL098W YCL021W-AQ96VH3 125 aa2.69□□□□□ -1.98
USE1YGL098W Q0255P03881 472 aa2.68□□□□□ -1.98
USE1YGL098W AQY1P0CD91 305 aa2.68□□□□□ -1.98
USE1YGL098W RPL2AP0CX45 254 aaKnown RBP2.68□□□□□ -1.98
USE1YGL098W RPL2BP0CX46 254 aaKnown RBP2.68□□□□□ -1.98
USE1YGL098W RPB8P20436 146 aa2.68□□□□□ -1.98
USE1YGL098W RPL32P38061 130 aaKnown RBP2.68□□□□□ -1.98
USE1YGL098W SMP1P38128 452 aa2.68□□□□□ -1.98
USE1YGL098W YHR180WP38868 163 aa2.68□□□□□ -1.98
USE1YGL098W SVP26P38869 228 aa2.68□□□□□ -1.98
USE1YGL098W GLE2P40066 365 aa2.68□□□□□ -1.98
USE1YGL098W NCA3P46955 337 aa2.68□□□□□ -1.98
USE1YGL098W UBC13P52490 153 aa2.68□□□□□ -1.98
USE1YGL098W UBC11P52492 156 aa2.68□□□□□ -1.98
USE1YGL098W YDR102CQ03864 110 aa2.68□□□□□ -1.98
USE1YGL098W SHH4Q06236 168 aa2.68□□□□□ -1.98
USE1YGL098W MSA1Q08471 629 aa2.68□□□□□ -1.98
USE1YGL098W HNT3Q08702 217 aa2.68□□□□□ -1.98
USE1YGL098W PIS1P06197 220 aaKnown RBP2.67□□□□□ -1.98
USE1YGL098W RPL30P14120 105 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms