RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YOR283WQ12040 230 aaKnown RBP3.88□□□□□ -1.79
LCP5YER127W DCN1Q12395 269 aa3.88□□□□□ -1.79
LCP5YER127W MRPL38P35996 138 aaPredicted RBP3.87□□□□□ -1.79
LCP5YER127W ECM33P38248 429 aaKnown RBP3.87□□□□□ -1.79
LCP5YER127W LSM1P47017 172 aaKnown RBP3.87□□□□□ -1.79
LCP5YER127W DAN1P47178 298 aa3.87□□□□□ -1.79
LCP5YER127W YLR031WQ07978 186 aa3.87□□□□□ -1.79
LCP5YER127W YOL118CQ08259 102 aa3.87□□□□□ -1.79
LCP5YER127W RAD28Q12021 506 aa3.87□□□□□ -1.79
LCP5YER127W ATG41Q12048 136 aa3.87□□□□□ -1.79
LCP5YER127W BOL1Q3E793 110 aa3.87□□□□□ -1.79
LCP5YER127W STF2P16965 84 aa3.86□□□□□ -1.79
LCP5YER127W TRR1P29509 319 aaKnown RBP3.86□□□□□ -1.79
LCP5YER127W YDR274CP87283 123 aa3.86□□□□□ -1.79
LCP5YER127W SCP1Q08873 200 aa3.86□□□□□ -1.79
LCP5YER127W SEN2P16658 377 aa3.85□□□□□ -1.79
LCP5YER127W YGR219WP53307 113 aa3.85□□□□□ -1.79
LCP5YER127W KEI1Q06346 221 aa3.85□□□□□ -1.79
LCP5YER127W LSO2Q3E772 92 aaKnown RBP3.85□□□□□ -1.79
LCP5YER127W PET20Q99373 253 aa3.85□□□□□ -1.79
LCP5YER127W YPR170W-BP0C5R9 85 aa3.84□□□□□ -1.79
LCP5YER127W YRA2P36036 203 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
LCP5YER127W DOG2P38773 246 aa3.84□□□□□ -1.79
LCP5YER127W DOG1P38774 246 aa3.84□□□□□ -1.79
LCP5YER127W HTD2P38790 280 aaKnown RBP3.84□□□□□ -1.79
LCP5YER127W YFR035CP43608 114 aa3.84□□□□□ -1.79
LCP5YER127W AIM25P47140 327 aa3.84□□□□□ -1.79
LCP5YER127W ARO8P53090 500 aaKnown RBP3.84□□□□□ -1.79
LCP5YER127W HUG1Q6Q5K6 68 aa3.84□□□□□ -1.79
LCP5YER127W YKR045CP36138 183 aa3.83□□□□□ -1.8
LCP5YER127W YPT31P38555 223 aaKnown RBP3.83□□□□□ -1.8
LCP5YER127W YGL258W-AQ3E740 77 aa3.83□□□□□ -1.8
LCP5YER127W LST8P41318 303 aa3.82□□□□□ -1.8
LCP5YER127W YDR157WA0A023PZE8 133 aa3.81□□□□□ -1.8
LCP5YER127W AUA1P32450 94 aa3.81□□□□□ -1.8
LCP5YER127W RRT1P38192 103 aa3.81□□□□□ -1.8
LCP5YER127W MGA1P53050 456 aa3.81□□□□□ -1.8
LCP5YER127W YOR385WQ08909 290 aa3.81□□□□□ -1.8
LCP5YER127W PAN3P36102 679 aaPredicted RBP3.8□□□□□ -1.8
LCP5YER127W ERV15P38312 142 aa3.8□□□□□ -1.8
LCP5YER127W HPA3P39979 161 aa3.8□□□□□ -1.8
LCP5YER127W RPL13BP40212 199 aaKnown RBP3.8□□□□□ -1.8
LCP5YER127W POR2P40478 281 aa3.8□□□□□ -1.8
LCP5YER127W SER2P42941 309 aa3.8□□□□□ -1.8
LCP5YER127W IRC18P47056 224 aa3.8□□□□□ -1.8
LCP5YER127W CWC23P52868 283 aaPredicted RBP3.8□□□□□ -1.8
LCP5YER127W THI74Q04083 370 aa3.8□□□□□ -1.8
LCP5YER127W SYM1Q06563 197 aa3.8□□□□□ -1.8
LCP5YER127W RPL13AQ12690 199 aaPredicted RBP3.8□□□□□ -1.8
LCP5YER127W QCR2P07257 368 aa3.79□□□□□ -1.8
LCP5YER127W NRG2P38082 220 aa3.79□□□□□ -1.8
LCP5YER127W YBL071CP38185 102 aa3.79□□□□□ -1.8
LCP5YER127W YJL027CP47063 138 aaPredicted RBP3.79□□□□□ -1.8
LCP5YER127W ARP3P47117 449 aaKnown RBP3.79□□□□□ -1.8
LCP5YER127W DID2P69771 204 aa3.79□□□□□ -1.8
LCP5YER127W YHR086W-AQ3E746 53 aa3.79□□□□□ -1.8
LCP5YER127W FPR2P32472 135 aa3.78□□□□□ -1.8
LCP5YER127W SNF11P38956 169 aa3.78□□□□□ -1.8
LCP5YER127W IRC22P40006 225 aa3.78□□□□□ -1.8
LCP5YER127W NSA2P40078 261 aaKnown RBP3.78□□□□□ -1.8
LCP5YER127W TDA4P47153 279 aa3.78□□□□□ -1.8
LCP5YER127W EST3Q03096 181 aa3.78□□□□□ -1.8
LCP5YER127W MRPS8Q03799 155 aa3.78□□□□□ -1.8
LCP5YER127W SDH7Q04401 133 aa3.78□□□□□ -1.8
LCP5YER127W MRS4P23500 304 aa3.77□□□□□ -1.81
LCP5YER127W MRP17P28778 131 aa3.77□□□□□ -1.81
LCP5YER127W ORM1P53224 222 aa3.77□□□□□ -1.81
LCP5YER127W COX12Q01519 83 aa3.77□□□□□ -1.81
LCP5YER127W IRC23Q08416 157 aa3.77□□□□□ -1.81
LCP5YER127W YPL162CQ12042 273 aa3.77□□□□□ -1.81
LCP5YER127W RDI1Q12434 202 aa3.77□□□□□ -1.81
LCP5YER127W TDA8Q6B2U8 126 aa3.77□□□□□ -1.81
LCP5YER127W SRL3P36167 246 aa3.76□□□□□ -1.81
LCP5YER127W YER137CP40083 148 aaKnown RBP3.76□□□□□ -1.81
LCP5YER127W LSM7P53905 115 aaKnown RBP3.76□□□□□ -1.81
LCP5YER127W URA5P13298 226 aaKnown RBP3.75□□□□□ -1.81
LCP5YER127W UTP11P34247 250 aaPredicted RBP3.75□□□□□ -1.81
LCP5YER127W APS1P35181 156 aa3.75□□□□□ -1.81
LCP5YER127W UPS2P35200 230 aa3.75□□□□□ -1.81
LCP5YER127W IPI1P38803 334 aaPredicted RBP3.75□□□□□ -1.81
LCP5YER127W YGR050CP53231 118 aa3.75□□□□□ -1.81
LCP5YER127W PDR17P53844 350 aa3.75□□□□□ -1.81
LCP5YER127W UBC7Q02159 165 aa3.75□□□□□ -1.81
LCP5YER127W MDN1Q12019 4910 aaKnown RBP3.75□□□□□ -1.81
LCP5YER127W GCN3P14741 305 aa3.74□□□□□ -1.81
LCP5YER127W VPS28Q02767 242 aa3.74□□□□□ -1.81
LCP5YER127W CSH1P38287 376 aa3.73□□□□□ -1.81
LCP5YER127W GPI2P46961 280 aa3.73□□□□□ -1.81
LCP5YER127W CGR1P53188 120 aa3.73□□□□□ -1.81
LCP5YER127W DYN2Q02647 92 aa3.73□□□□□ -1.81
LCP5YER127W YMR090WQ04304 227 aaKnown RBP3.73□□□□□ -1.81
LCP5YER127W TAR1Q8TGM6 124 aa3.73□□□□□ -1.81
LCP5YER127W ACP1P32463 125 aa3.72□□□□□ -1.81
LCP5YER127W VMA22P38784 181 aa3.72□□□□□ -1.81
LCP5YER127W DAD3P69850 94 aa3.72□□□□□ -1.81
LCP5YER127W YLR156WP0CE96 114 aa3.71□□□□□ -1.82
LCP5YER127W YLR159WP0CE97 114 aa3.71□□□□□ -1.82
LCP5YER127W YLR161WP0CE98 114 aa3.71□□□□□ -1.82
LCP5YER127W SPT14P32363 452 aa3.71□□□□□ -1.82
LCP5YER127W YIP3P53633 176 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 44.2 ms