RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeastyeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC8YEL013W YLR307C-AQ3E825 87 aa1.81□□□□□ -2.12
VAC8YEL013W SHE2P36068 246 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
VAC8YEL013W BFR1P38934 470 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
VAC8YEL013W YER085CP40058 173 aa1.8□□□□□ -2.12
VAC8YEL013W OTU1P43558 301 aa1.8□□□□□ -2.12
VAC8YEL013W DSK2P48510 373 aa1.8□□□□□ -2.12
VAC8YEL013W UBC7Q02159 165 aa1.8□□□□□ -2.12
VAC8YEL013W GTO3Q04806 366 aa1.8□□□□□ -2.12
VAC8YEL013W IES3Q12345 250 aa1.8□□□□□ -2.12
VAC8YEL013W ATG5Q12380 294 aa1.8□□□□□ -2.12
VAC8YEL013W YEL009C-AA0A023PZF2 135 aa1.8□□□□□ -2.12
VAC8YEL013W QRI5P32344 111 aa1.8□□□□□ -2.12
VAC8YEL013W NSA2P40078 261 aaKnown RBP1.8□□□□□ -2.12
VAC8YEL013W MSS2P40990 351 aa1.8□□□□□ -2.12
VAC8YEL013W YAE1P47118 141 aaPredicted RBP1.8□□□□□ -2.12
VAC8YEL013W YGR050CP53231 118 aa1.8□□□□□ -2.12
VAC8YEL013W DIA1P54005 336 aa1.8□□□□□ -2.12
VAC8YEL013W PAM18Q07914 168 aa1.8□□□□□ -2.12
VAC8YEL013W COS8P38723 381 aa1.79□□□□□ -2.12
VAC8YEL013W YHR022CP38763 256 aa1.79□□□□□ -2.12
VAC8YEL013W DYN2Q02647 92 aa1.79□□□□□ -2.12
VAC8YEL013W SDH7Q04401 133 aa1.79□□□□□ -2.12
VAC8YEL013W DXO1Q06349 442 aa1.79□□□□□ -2.12
VAC8YEL013W FRQ1Q06389 190 aa1.79□□□□□ -2.12
VAC8YEL013W RPL33AP05744 107 aaKnown RBP1.78□□□□□ -2.12
VAC8YEL013W CDC7P06243 507 aa1.78□□□□□ -2.12
VAC8YEL013W YCR016WP25617 290 aaKnown RBP1.78□□□□□ -2.12
VAC8YEL013W RPL33BP41056 107 aaKnown RBP1.78□□□□□ -2.12
VAC8YEL013W YFR045WP43617 309 aa1.78□□□□□ -2.12
VAC8YEL013W YMR253CQ04835 414 aa1.78□□□□□ -2.12
VAC8YEL013W ATG41Q12048 136 aa1.78□□□□□ -2.12
VAC8YEL013W RTC3P38804 111 aaPredicted RBP1.77□□□□□ -2.13
VAC8YEL013W EGD2P38879 174 aaKnown RBP1.77□□□□□ -2.13
VAC8YEL013W MMS2P53152 137 aa1.77□□□□□ -2.13
VAC8YEL013W SYM1Q06563 197 aa1.77□□□□□ -2.13
VAC8YEL013W PRR2Q12310 699 aa1.77□□□□□ -2.13
VAC8YEL013W VAR1P02381 398 aa1.77□□□□□ -2.13
VAC8YEL013W DDR48P18899 430 aaKnown RBP1.77□□□□□ -2.13
VAC8YEL013W YBR013CP38215 129 aa1.77□□□□□ -2.13
VAC8YEL013W KEI1Q06346 221 aa1.77□□□□□ -2.13
VAC8YEL013W SCP1Q08873 200 aa1.77□□□□□ -2.13
VAC8YEL013W RRT15Q3E811 62 aa1.77□□□□□ -2.13
VAC8YEL013W PET20Q99373 253 aa1.77□□□□□ -2.13
VAC8YEL013W URA5P13298 226 aaKnown RBP1.76□□□□□ -2.13
VAC8YEL013W RPB3P16370 318 aaKnown RBP1.76□□□□□ -2.13
VAC8YEL013W HOM6P31116 359 aaKnown RBP1.76□□□□□ -2.13
VAC8YEL013W SPI1P40092 148 aa1.76□□□□□ -2.13
VAC8YEL013W MRPL50P53724 139 aa1.76□□□□□ -2.13
VAC8YEL013W TMA23Q03525 211 aa1.76□□□□□ -2.13
VAC8YEL013W YPR145C-AQ2V2P0 78 aa1.76□□□□□ -2.13
VAC8YEL013W YBL112CQ3E7Y4 105 aa1.76□□□□□ -2.13
VAC8YEL013W DDI2P0CH63 225 aa1.75□□□□□ -2.13
VAC8YEL013W DDI3P0CH64 225 aa1.75□□□□□ -2.13
VAC8YEL013W EMP24P32803 203 aaKnown RBP1.75□□□□□ -2.13
VAC8YEL013W YJL144WP47009 104 aa1.75□□□□□ -2.13
VAC8YEL013W NIF3P53081 288 aa1.75□□□□□ -2.13
VAC8YEL013W CSM4Q08955 156 aa1.75□□□□□ -2.13
VAC8YEL013W SFT2P38166 215 aa1.74□□□□□ -2.13
VAC8YEL013W SUR2P38992 349 aa1.74□□□□□ -2.13
VAC8YEL013W EMC5P40540 141 aa1.74□□□□□ -2.13
VAC8YEL013W CMC4Q3E7A9 73 aa1.74□□□□□ -2.13
VAC8YEL013W QCR2P07257 368 aa1.74□□□□□ -2.13
VAC8YEL013W OST3P48439 350 aa1.74□□□□□ -2.13
VAC8YEL013W FCF1Q05498 189 aaPredicted RBP1.74□□□□□ -2.13
VAC8YEL013W YOR385WQ08909 290 aa1.74□□□□□ -2.13
VAC8YEL013W YOR283WQ12040 230 aaKnown RBP1.74□□□□□ -2.13
VAC8YEL013W YCT1Q12235 531 aa1.74□□□□□ -2.13
VAC8YEL013W POC4Q12245 148 aaPredicted RBP1.74□□□□□ -2.13
VAC8YEL013W ISD11Q6Q560 94 aa1.74□□□□□ -2.13
VAC8YEL013W YPR010C-AA5Z2X5 72 aa1.73□□□□□ -2.13
VAC8YEL013W ERV15P38312 142 aa1.73□□□□□ -2.13
VAC8YEL013W GOS1P38736 223 aa1.73□□□□□ -2.13
VAC8YEL013W SVP26P38869 228 aa1.73□□□□□ -2.13
VAC8YEL013W GVP36P40531 326 aaKnown RBP1.73□□□□□ -2.13
VAC8YEL013W YGL034CP53186 121 aa1.73□□□□□ -2.13
VAC8YEL013W BRP1P53194 125 aa1.73□□□□□ -2.13
VAC8YEL013W YDR366CP87287 132 aa1.73□□□□□ -2.13
VAC8YEL013W YLR031WQ07978 186 aa1.73□□□□□ -2.13
VAC8YEL013W TIM22Q12328 207 aa1.73□□□□□ -2.13
VAC8YEL013W MED11Q99278 115 aa1.73□□□□□ -2.13
VAC8YEL013W YAR023CD6VPM8 179 aa1.72□□□□□ -2.13
VAC8YEL013W TIR1P10863 254 aa1.72□□□□□ -2.13
VAC8YEL013W HYP2P23301 157 aaKnown RBP1.72□□□□□ -2.13
VAC8YEL013W MRP17P28778 131 aa1.72□□□□□ -2.13
VAC8YEL013W HTD2P38790 280 aaKnown RBP1.72□□□□□ -2.13
VAC8YEL013W YNL217WP40152 326 aa1.72□□□□□ -2.13
VAC8YEL013W LSM1P47017 172 aaKnown RBP1.72□□□□□ -2.13
VAC8YEL013W ERI1P62651 68 aaKnown RBP1.72□□□□□ -2.13
VAC8YEL013W SNU23Q12368 194 aaPredicted RBP1.72□□□□□ -2.13
VAC8YEL013W YBL008W-AQ3E821 79 aa1.72□□□□□ -2.13
VAC8YEL013W Q0255P03881 472 aa1.71□□□□□ -2.13
VAC8YEL013W RPL24BP24000 155 aaKnown RBP1.71□□□□□ -2.13
VAC8YEL013W LSM2P38203 95 aaKnown RBP1.71□□□□□ -2.13
VAC8YEL013W MAK3Q03503 176 aa1.71□□□□□ -2.13
VAC8YEL013W YLR179CQ06252 201 aaKnown RBP1.71□□□□□ -2.13
VAC8YEL013W YDR029WQ12111 104 aa1.71□□□□□ -2.13
VAC8YEL013W NHP6BP11633 99 aaKnown RBP1.71□□□□□ -2.14
VAC8YEL013W SHB17P36136 271 aaKnown RBP1.71□□□□□ -2.14
VAC8YEL013W MRPL28P36527 147 aa1.71□□□□□ -2.14
VAC8YEL013W TEM1P38987 245 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms