RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W HRD1Q08109 551 aa1.21□□□□□ -2.22
RPN9YDR427W YDL157CQ12082 118 aa1.21□□□□□ -2.22
RPN9YDR427W YGL230CP53074 147 aa1.2□□□□□ -2.22
RPN9YDR427W ORM1P53224 222 aa1.2□□□□□ -2.22
RPN9YDR427W YDR102CQ03864 110 aa1.2□□□□□ -2.22
RPN9YDR427W YPR114WQ06107 315 aa1.2□□□□□ -2.22
RPN9YDR427W RIF1P29539 1916 aa1.2□□□□□ -2.22
RPN9YDR427W RPS25BP0C0T4 108 aaKnown RBP1.19□□□□□ -2.22
RPN9YDR427W UBI4P0CG63 381 aaKnown RBP1.19□□□□□ -2.22
RPN9YDR427W INO4P13902 151 aa1.19□□□□□ -2.22
RPN9YDR427W YKR070WP36151 352 aaKnown RBP1.19□□□□□ -2.22
RPN9YDR427W YPT31P38555 223 aaKnown RBP1.19□□□□□ -2.22
RPN9YDR427W DCV1P43595 202 aa1.19□□□□□ -2.22
RPN9YDR427W TLG1Q03322 224 aa1.19□□□□□ -2.22
RPN9YDR427W YDL241WQ07738 123 aa1.19□□□□□ -2.22
RPN9YDR427W UIP4Q08926 304 aa1.19□□□□□ -2.22
RPN9YDR427W RPS25AQ3E792 108 aaPredicted RBP1.19□□□□□ -2.22
RPN9YDR427W ATP5P09457 212 aa1.18□□□□□ -2.22
RPN9YDR427W SRP102P36057 244 aaPredicted RBP1.18□□□□□ -2.22
RPN9YDR427W CCC1P47818 322 aa1.18□□□□□ -2.22
RPN9YDR427W LSM3P57743 89 aaKnown RBP1.18□□□□□ -2.22
RPN9YDR427W AIM36Q03798 255 aa1.18□□□□□ -2.22
RPN9YDR427W NKP2Q06162 153 aa1.18□□□□□ -2.22
RPN9YDR427W LAA1P39526 2014 aa1.18□□□□□ -2.22
RPN9YDR427W QCR2P07257 368 aa1.17□□□□□ -2.22
RPN9YDR427W UBC6P33296 250 aaPredicted RBP1.17□□□□□ -2.22
RPN9YDR427W YNR064CP53750 290 aa1.17□□□□□ -2.22
RPN9YDR427W MAK3Q03503 176 aa1.17□□□□□ -2.22
RPN9YDR427W CCW12Q12127 133 aa1.17□□□□□ -2.22
RPN9YDR427W YLR046CQ12253 270 aa1.17□□□□□ -2.22
RPN9YDR427W RAD50P12753 1312 aa1.16□□□□□ -2.22
RPN9YDR427W UGX2P32772 223 aa1.16□□□□□ -2.22
RPN9YDR427W HTD2P38790 280 aaKnown RBP1.16□□□□□ -2.22
RPN9YDR427W GLC8P41818 229 aa1.16□□□□□ -2.22
RPN9YDR427W PRE1P22141 198 aaKnown RBP1.15□□□□□ -2.23
RPN9YDR427W RME1P32338 300 aaKnown RBP1.15□□□□□ -2.23
RPN9YDR427W AME1P38313 324 aa1.15□□□□□ -2.23
RPN9YDR427W DLS1P40366 167 aa1.15□□□□□ -2.23
RPN9YDR427W YJR015WP47090 510 aa1.15□□□□□ -2.23
RPN9YDR427W YDR476CQ03362 224 aa1.15□□□□□ -2.23
RPN9YDR427W YPR202WQ08993 238 aa1.15□□□□□ -2.23
RPN9YDR427W NSL1Q12143 216 aa1.15□□□□□ -2.23
RPN9YDR427W KIN28P06242 306 aa1.14□□□□□ -2.23
RPN9YDR427W RPL30P14120 105 aaKnown RBP1.14□□□□□ -2.23
RPN9YDR427W SPT14P32363 452 aa1.14□□□□□ -2.23
RPN9YDR427W SLM6P38343 150 aa1.14□□□□□ -2.23
RPN9YDR427W YAR064WP39563 99 aa1.14□□□□□ -2.23
RPN9YDR427W YDC1Q02896 317 aa1.14□□□□□ -2.23
RPN9YDR427W KEI1Q06346 221 aa1.14□□□□□ -2.23
RPN9YDR427W MRS4P23500 304 aa1.13□□□□□ -2.23
RPN9YDR427W APQ12P40532 138 aa1.13□□□□□ -2.23
RPN9YDR427W CIN5P40917 295 aa1.13□□□□□ -2.23
RPN9YDR427W FIP1P45976 327 aa1.13□□□□□ -2.23
RPN9YDR427W GEP7P53171 287 aa1.13□□□□□ -2.23
RPN9YDR427W FCY1Q12178 158 aa1.13□□□□□ -2.23
RPN9YDR427W CMC4Q3E7A9 73 aa1.13□□□□□ -2.23
RPN9YDR427W DER1P38307 211 aa1.12□□□□□ -2.23
RPN9YDR427W YIL102CP40488 101 aa1.12□□□□□ -2.23
RPN9YDR427W APS3P47064 194 aa1.12□□□□□ -2.23
RPN9YDR427W EFG1Q3E705 233 aaKnown RBP1.12□□□□□ -2.23
RPN9YDR427W TOM1Q03280 3268 aa1.12□□□□□ -2.23
RPN9YDR427W HFA1P32874 2273 aa1.12□□□□□ -2.23
RPN9YDR427W RPS28BP0C0X0 67 aaKnown RBP1.11□□□□□ -2.23
RPN9YDR427W YEL014CP39999 101 aa1.11□□□□□ -2.23
RPN9YDR427W YMR321CQ04898 105 aa1.11□□□□□ -2.23
RPN9YDR427W RPS28AQ3E7X9 67 aaPredicted RBP1.11□□□□□ -2.23
RPN9YDR427W YGL193CP53097 103 aa1.1□□□□□ -2.23
RPN9YDR427W SMD2Q06217 110 aaKnown RBP1.1□□□□□ -2.23
RPN9YDR427W VPS13Q07878 3144 aa1.09□□□□□ -2.23
RPN9YDR427W PBI2P0CT04 75 aaKnown RBP1.09□□□□□ -2.23
RPN9YDR427W PEX34P25584 144 aa1.09□□□□□ -2.23
RPN9YDR427W SRP21P32342 167 aa1.09□□□□□ -2.23
RPN9YDR427W HSP150P32478 413 aa1.09□□□□□ -2.23
RPN9YDR427W YBR027CP38220 110 aa1.09□□□□□ -2.23
RPN9YDR427W YER181CP40097 107 aa1.09□□□□□ -2.23
RPN9YDR427W FMN1Q03778 218 aa1.09□□□□□ -2.23
RPN9YDR427W NMA1Q06178 401 aaKnown RBP1.09□□□□□ -2.23
RPN9YDR427W UBR1P19812 1950 aa1.08□□□□□ -2.24
RPN9YDR427W BUB2P26448 306 aaPredicted RBP1.08□□□□□ -2.24
RPN9YDR427W TMA23Q03525 211 aa1.08□□□□□ -2.24
RPN9YDR427W YDR278CQ05612 105 aa1.08□□□□□ -2.24
RPN9YDR427W YPD1Q07688 167 aa1.08□□□□□ -2.24
RPN9YDR427W STT4P37297 1900 aa1.08□□□□□ -2.24
RPN9YDR427W CDC39P25655 2108 aaKnown RBP1.07□□□□□ -2.24
RPN9YDR427W YCR001WP25347 104 aa1.07□□□□□ -2.24
RPN9YDR427W RCF2P53721 224 aa1.07□□□□□ -2.24
RPN9YDR427W IRC19Q07843 230 aa1.07□□□□□ -2.24
RPN9YDR427W RFU1Q08003 200 aa1.07□□□□□ -2.24
RPN9YDR427W YDR034W-BQ6Q5X2 51 aa1.07□□□□□ -2.24
RPN9YDR427W FMP49A0A023PZB3 126 aa1.06□□□□□ -2.24
RPN9YDR427W YOL013W-AP0C272 63 aaPredicted RBP1.06□□□□□ -2.24
RPN9YDR427W PHO13P19881 312 aa1.06□□□□□ -2.24
RPN9YDR427W MRPL24P36525 258 aaPredicted RBP1.06□□□□□ -2.24
RPN9YDR427W YJL218WP40892 196 aaKnown RBP1.06□□□□□ -2.24
RPN9YDR427W VAM10Q08474 114 aa1.06□□□□□ -2.24
RPN9YDR427W YDR524C-BQ3E6R4 66 aa1.06□□□□□ -2.24
RPN9YDR427W DDP1Q99321 188 aaKnown RBP1.06□□□□□ -2.24
RPN9YDR427W ECM31P38122 312 aa1.05□□□□□ -2.24
RPN9YDR427W ATG8P38182 117 aaRIP-Chip data1.05□□□□□ -2.24not detected
RPN9YDR427W FIG1P38224 298 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms