RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A NAT5Q08689 176 aa-0.88□□□□□ -2.55
SDH6YDR379C-A RPS1BP23248 255 aaKnown RBP-0.89□□□□□ -2.55
SDH6YDR379C-A PHB1P40961 287 aa-0.89□□□□□ -2.55
SDH6YDR379C-A GTT2Q12390 233 aa-0.89□□□□□ -2.55
SDH6YDR379C-A YGR240C-AQ3E786 66 aa-0.89□□□□□ -2.55
SDH6YDR379C-A SEC7P11075 2009 aaKnown RBP-0.89□□□□□ -2.55
SDH6YDR379C-A URB1P34241 1764 aaKnown RBP-0.9□□□□□ -2.55
SDH6YDR379C-A JIP3O13555 125 aa-0.9□□□□□ -2.55
SDH6YDR379C-A ICS3P47034 131 aa-0.9□□□□□ -2.55
SDH6YDR379C-A YPD1Q07688 167 aa-0.9□□□□□ -2.55
SDH6YDR379C-A FCF2Q12035 217 aaPredicted RBP-0.9□□□□□ -2.55
SDH6YDR379C-A ENV10Q99382 181 aa-0.9□□□□□ -2.55
SDH6YDR379C-A CCW14O13547 238 aa-0.91□□□□□ -2.56
SDH6YDR379C-A RPB4P20433 221 aaPredicted RBP-0.91□□□□□ -2.56
SDH6YDR379C-A YIL163CP40448 117 aa-0.91□□□□□ -2.56
SDH6YDR379C-A YGL149WP53116 101 aa-0.91□□□□□ -2.56
SDH6YDR379C-A ORM1P53224 222 aa-0.91□□□□□ -2.56
SDH6YDR379C-A HSK3P69852 69 aa-0.91□□□□□ -2.56
SDH6YDR379C-A SOM1Q05676 74 aa-0.91□□□□□ -2.56
SDH6YDR379C-A HPA2Q06592 156 aa-0.91□□□□□ -2.56
SDH6YDR379C-A YOR385WQ08909 290 aa-0.91□□□□□ -2.56
SDH6YDR379C-A YLR050CQ12155 161 aaKnown RBP-0.91□□□□□ -2.56
SDH6YDR379C-A OCA6Q12454 224 aa-0.91□□□□□ -2.56
SDH6YDR379C-A CMD1P06787 147 aaKnown RBP-0.92□□□□□ -2.56
SDH6YDR379C-A TRR1P29509 319 aaKnown RBP-0.92□□□□□ -2.56
SDH6YDR379C-A GSP1P32835 219 aaKnown RBP-0.92□□□□□ -2.56
SDH6YDR379C-A FIG1P38224 298 aa-0.92□□□□□ -2.56
SDH6YDR379C-A AIM18P38884 321 aa-0.92□□□□□ -2.56
SDH6YDR379C-A DLS1P40366 167 aa-0.92□□□□□ -2.56
SDH6YDR379C-A LSM3P57743 89 aaKnown RBP-0.92□□□□□ -2.56
SDH6YDR379C-A YRF1-6P53819 1859 aa-0.92□□□□□ -2.56
SDH6YDR379C-A RSF2P46974 1380 aa-0.93□□□□□ -2.56
SDH6YDR379C-A RTC6O14464 93 aa-0.93□□□□□ -2.56
SDH6YDR379C-A HAP3P13434 144 aa-0.93□□□□□ -2.56
SDH6YDR379C-A RPL30P14120 105 aaKnown RBP-0.93□□□□□ -2.56
SDH6YDR379C-A APA2P22108 325 aa-0.93□□□□□ -2.56
SDH6YDR379C-A YER181CP40097 107 aa-0.93□□□□□ -2.56
SDH6YDR379C-A BRP1P53194 125 aa-0.93□□□□□ -2.56
SDH6YDR379C-A EFM5P53200 248 aaKnown RBP-0.93□□□□□ -2.56
SDH6YDR379C-A UBI4P0CG63 381 aaKnown RBP-0.94□□□□□ -2.56
SDH6YDR379C-A EGD2P38879 174 aaKnown RBP-0.94□□□□□ -2.56
SDH6YDR379C-A YJL218WP40892 196 aaKnown RBP-0.94□□□□□ -2.56
SDH6YDR379C-A RAF1Q06891 181 aa-0.94□□□□□ -2.56
SDH6YDR379C-A PET20Q99373 253 aa-0.94□□□□□ -2.56
SDH6YDR379C-A PHS1P40857 217 aa-0.95□□□□□ -2.56
SDH6YDR379C-A RUB1Q03919 77 aa-0.95□□□□□ -2.56
SDH6YDR379C-A YGL041C-BQ3E750 60 aa-0.95□□□□□ -2.56
SDH6YDR379C-A DDP1Q99321 188 aaKnown RBP-0.95□□□□□ -2.56
SDH6YDR379C-A RIM15P43565 1770 aa-0.96□□□□□ -2.56
SDH6YDR379C-A YFR009W-AP0C5M9 85 aa-0.96□□□□□ -2.56
SDH6YDR379C-A MRPL44P19956 98 aa-0.96□□□□□ -2.56
SDH6YDR379C-A YKT6P36015 200 aaKnown RBP-0.96□□□□□ -2.56
SDH6YDR379C-A SEC72P39742 193 aaKnown RBP-0.96□□□□□ -2.56
SDH6YDR379C-A CGR1P53188 120 aa-0.96□□□□□ -2.56
SDH6YDR379C-A YGR017WP53210 297 aa-0.96□□□□□ -2.56
SDH6YDR379C-A RAV2Q03956 351 aa-0.96□□□□□ -2.56
SDH6YDR379C-A RPO41P13433 1351 aaKnown RBP-0.96□□□□□ -2.56
SDH6YDR379C-A HSP12P22943 109 aaKnown RBP-0.97□□□□□ -2.56
SDH6YDR379C-A APQ12P40532 138 aa-0.97□□□□□ -2.56
SDH6YDR379C-A ECM5Q03214 1411 aa-0.98□□□□□ -2.57
SDH6YDR379C-A RPL22AP05749 121 aaKnown RBP-0.98□□□□□ -2.57
SDH6YDR379C-A ATP7P30902 174 aa-0.98□□□□□ -2.57
SDH6YDR379C-A RPS1AP33442 255 aaKnown RBP-0.98□□□□□ -2.57
SDH6YDR379C-A PRS3P38689 320 aaKnown RBP-0.98□□□□□ -2.57
SDH6YDR379C-A GCV3P39726 170 aaPredicted RBP-0.98□□□□□ -2.57
SDH6YDR379C-A GAT4P40569 121 aa-0.98□□□□□ -2.57
SDH6YDR379C-A LSM1P47017 172 aaKnown RBP-0.98□□□□□ -2.57
SDH6YDR379C-A LSM8P47093 109 aaKnown RBP-0.98□□□□□ -2.57
SDH6YDR379C-A EFG1Q3E705 233 aaKnown RBP-0.98□□□□□ -2.57
SDH6YDR379C-A RPL36BO14455 100 aaKnown RBP-0.99□□□□□ -2.57
SDH6YDR379C-A RPL36AP05745 100 aaPredicted RBP-0.99□□□□□ -2.57
SDH6YDR379C-A ADK1P07170 222 aaKnown RBP-0.99□□□□□ -2.57
SDH6YDR379C-A YAP3P38749 330 aa-0.99□□□□□ -2.57
SDH6YDR379C-A HSP10P38910 106 aa-0.99□□□□□ -2.57
SDH6YDR379C-A YIP3P53633 176 aa-0.99□□□□□ -2.57
SDH6YDR379C-A YDR476CQ03362 224 aa-0.99□□□□□ -2.57
SDH6YDR379C-A PAU21P0CE86 164 aa-1□□□□□ -2.57
SDH6YDR379C-A PAU22P0CE87 164 aa-1□□□□□ -2.57
SDH6YDR379C-A QCR10P37299 77 aa-1□□□□□ -2.57
SDH6YDR379C-A YBR016WP38216 128 aa-1□□□□□ -2.57
SDH6YDR379C-A YNL198CP40166 100 aa-1□□□□□ -2.57
SDH6YDR379C-A HPM1P40481 377 aa-1□□□□□ -2.57
SDH6YDR379C-A YGR201CP42936 225 aa-1□□□□□ -2.57
SDH6YDR379C-A YPR202WQ08993 238 aa-1□□□□□ -2.57
SDH6YDR379C-A SEN1Q00416 2231 aaKnown RBP-1□□□□□ -2.57
SDH6YDR379C-A MAK3Q03503 176 aa-1.01□□□□□ -2.57
SDH6YDR379C-A SDH7Q04401 133 aa-1.01□□□□□ -2.57
SDH6YDR379C-A QCR2P07257 368 aa-1.02□□□□□ -2.57
SDH6YDR379C-A PBI2P0CT04 75 aaKnown RBP-1.02□□□□□ -2.57
SDH6YDR379C-A YPK9Q12697 1472 aa-1.02□□□□□ -2.57
SDH6YDR379C-A SPG1P50088 95 aa-1.03□□□□□ -2.57
SDH6YDR379C-A PKR1Q03880 122 aaKnown RBP-1.03□□□□□ -2.57
SDH6YDR379C-A YLR053CQ12026 108 aa-1.03□□□□□ -2.57
SDH6YDR379C-A RPL35AP0CX84 120 aaKnown RBP-1.04□□□□□ -2.58
SDH6YDR379C-A RPL35BP0CX85 120 aaKnown RBP-1.04□□□□□ -2.58
SDH6YDR379C-A SHU1P38751 150 aa-1.04□□□□□ -2.58
SDH6YDR379C-A CYB5P40312 120 aa-1.04□□□□□ -2.58
SDH6YDR379C-A YIL086CP40503 102 aa-1.04□□□□□ -2.58
SDH6YDR379C-A TIM11P81449 96 aaPredicted RBP-1.04□□□□□ -2.58
SDH6YDR379C-A NSL1Q12143 216 aa-1.04□□□□□ -2.58
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms