RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W NRK1P53915 240 aa1.37□□□□□ -2.19
SSF2YDR312W GPI17Q04080 534 aa1.37□□□□□ -2.19
SSF2YDR312W SHH3Q04487 196 aa1.37□□□□□ -2.19
SSF2YDR312W HOR7Q05827 59 aa1.37□□□□□ -2.19
SSF2YDR312W NOC4Q06512 552 aaPredicted RBP1.37□□□□□ -2.19
SSF2YDR312W YHR007C-AQ07074 71 aa1.37□□□□□ -2.19
SSF2YDR312W PRM3Q08931 133 aa1.37□□□□□ -2.19
SSF2YDR312W MPD1Q12404 318 aaKnown RBP1.37□□□□□ -2.19
SSF2YDR312W YKL018C-AQ3E7A7 99 aa1.37□□□□□ -2.19
SSF2YDR312W POR1P04840 283 aaKnown RBP1.36□□□□□ -2.19
SSF2YDR312W SPO13P23624 291 aa1.36□□□□□ -2.19
SSF2YDR312W TRR1P29509 319 aaKnown RBP1.36□□□□□ -2.19
SSF2YDR312W MPC1P53157 130 aaKnown RBP1.36□□□□□ -2.19
SSF2YDR312W RCF2P53721 224 aa1.36□□□□□ -2.19
SSF2YDR312W PLP1Q04004 230 aa1.36□□□□□ -2.19
SSF2YDR312W RAD28Q12021 506 aa1.36□□□□□ -2.19
SSF2YDR312W YLR053CQ12026 108 aa1.36□□□□□ -2.19
SSF2YDR312W ROX3P25046 220 aa1.35□□□□□ -2.19
SSF2YDR312W AHC2P25649 128 aa1.35□□□□□ -2.19
SSF2YDR312W YKR045CP36138 183 aa1.35□□□□□ -2.19
SSF2YDR312W SRL3P36167 246 aa1.35□□□□□ -2.19
SSF2YDR312W RGI1P40043 161 aaPredicted RBP1.35□□□□□ -2.19
SSF2YDR312W POG1P40473 351 aa1.35□□□□□ -2.19
SSF2YDR312W XPT1P47165 209 aa1.35□□□□□ -2.19
SSF2YDR312W AIM34Q03673 198 aa1.35□□□□□ -2.19
SSF2YDR312W YHP1Q04116 353 aa1.35□□□□□ -2.19
SSF2YDR312W RPC19P28000 142 aaKnown RBP1.34□□□□□ -2.19
SSF2YDR312W ARC19P33204 171 aaKnown RBP1.34□□□□□ -2.19
SSF2YDR312W ECM31P38122 312 aa1.34□□□□□ -2.19
SSF2YDR312W MPC2P38857 129 aa1.34□□□□□ -2.19
SSF2YDR312W YGR201CP42936 225 aa1.34□□□□□ -2.19
SSF2YDR312W MPC3P53311 146 aa1.34□□□□□ -2.19
SSF2YDR312W DAD4P69851 72 aa1.34□□□□□ -2.19
SSF2YDR312W DIG2Q03373 323 aaKnown RBP1.34□□□□□ -2.19
SSF2YDR312W SHH4Q06236 168 aa1.34□□□□□ -2.19
SSF2YDR312W RPL2AP0CX45 254 aaKnown RBP1.34□□□□□ -2.2
SSF2YDR312W RPL2BP0CX46 254 aaKnown RBP1.34□□□□□ -2.2
SSF2YDR312W SFK1P35735 353 aa1.34□□□□□ -2.2
SSF2YDR312W YJR111CP47148 283 aaKnown RBP1.34□□□□□ -2.2
SSF2YDR312W HHT1P61830 136 aa1.34□□□□□ -2.2
SSF2YDR312W DML1Q03652 475 aa1.34□□□□□ -2.2
SSF2YDR312W AIM36Q03798 255 aa1.34□□□□□ -2.2
SSF2YDR312W RNH202Q05635 350 aa1.34□□□□□ -2.2
SSF2YDR312W YML100W-AQ8TGT0 57 aa1.34□□□□□ -2.2
SSF2YDR312W TIR1P10863 254 aa1.33□□□□□ -2.2
SSF2YDR312W VMA22P38784 181 aa1.33□□□□□ -2.2
SSF2YDR312W NVJ1P38881 321 aa1.33□□□□□ -2.2
SSF2YDR312W NSA2P40078 261 aaKnown RBP1.33□□□□□ -2.2
SSF2YDR312W YAE1P47118 141 aaPredicted RBP1.33□□□□□ -2.2
SSF2YDR312W YPL067CQ02754 198 aa1.33□□□□□ -2.2
SSF2YDR312W CWC27Q02770 301 aa1.33□□□□□ -2.2
SSF2YDR312W SNO1Q03144 224 aa1.33□□□□□ -2.2
SSF2YDR312W YMR099CQ03161 297 aaKnown RBP1.33□□□□□ -2.2
SSF2YDR312W NAT3Q06504 195 aa1.33□□□□□ -2.2
SSF2YDR312W YOL014WQ08110 124 aa1.33□□□□□ -2.2
SSF2YDR312W YLR050CQ12155 161 aaKnown RBP1.33□□□□□ -2.2
SSF2YDR312W MHF2Q3E829 80 aa1.33□□□□□ -2.2
SSF2YDR312W QCR8P08525 94 aa1.32□□□□□ -2.2
SSF2YDR312W RPL30P14120 105 aaKnown RBP1.32□□□□□ -2.2
SSF2YDR312W STF2P16965 84 aa1.32□□□□□ -2.2
SSF2YDR312W IDP1P21954 428 aaKnown RBP1.32□□□□□ -2.2
SSF2YDR312W NUF2P33895 451 aa1.32□□□□□ -2.2
SSF2YDR312W YHL042WP38729 150 aa1.32□□□□□ -2.2
SSF2YDR312W HPA3P39979 161 aa1.32□□□□□ -2.2
SSF2YDR312W SPC25P40014 221 aa1.32□□□□□ -2.2
SSF2YDR312W YER076CP40049 302 aa1.32□□□□□ -2.2
SSF2YDR312W RIO2P40160 425 aaKnown RBP1.32□□□□□ -2.2
SSF2YDR312W SMX2P40204 77 aaKnown RBP1.32□□□□□ -2.2
SSF2YDR312W TTI2P47168 421 aa1.32□□□□□ -2.2
SSF2YDR312W RFU1Q08003 200 aa1.32□□□□□ -2.2
SSF2YDR312W IRC23Q08416 157 aa1.32□□□□□ -2.2
SSF2YDR312W YOR015WQ12169 119 aa1.32□□□□□ -2.2
SSF2YDR312W YNL146C-AQ3E7Z1 64 aa1.32□□□□□ -2.2
SSF2YDR312W RIB3Q99258 208 aa1.32□□□□□ -2.2
SSF2YDR312W KIN28P06242 306 aa1.31□□□□□ -2.2
SSF2YDR312W MRS4P23500 304 aa1.31□□□□□ -2.2
SSF2YDR312W ARO7P32178 256 aa1.31□□□□□ -2.2
SSF2YDR312W SRP102P36057 244 aaPredicted RBP1.31□□□□□ -2.2
SSF2YDR312W RFC2P40348 353 aa1.31□□□□□ -2.2
SSF2YDR312W YFL019CP43576 117 aa1.31□□□□□ -2.2
SSF2YDR312W COX12Q01519 83 aa1.31□□□□□ -2.2
SSF2YDR312W GIM5Q04493 163 aa1.31□□□□□ -2.2
SSF2YDR312W YPR013CQ12145 317 aa1.31□□□□□ -2.2
SSF2YDR312W CMC2Q3E7A4 109 aa1.31□□□□□ -2.2
SSF2YDR312W YPL073CP40323 161 aa1.3□□□□□ -2.2
SSF2YDR312W GPI14P47088 403 aaKnown RBP1.3□□□□□ -2.2
SSF2YDR312W UBC7Q02159 165 aa1.3□□□□□ -2.2
SSF2YDR312W YKR005CQ02203 525 aa1.3□□□□□ -2.2
SSF2YDR312W YMR253CQ04835 414 aa1.3□□□□□ -2.2
SSF2YDR312W LCL2Q08045 131 aa1.3□□□□□ -2.2
SSF2YDR312W SPC3Q12133 184 aa1.3□□□□□ -2.2
SSF2YDR312W DGK1Q12382 290 aa1.3□□□□□ -2.2
SSF2YDR312W YCR023CP25351 611 aa1.29□□□□□ -2.2
SSF2YDR312W HYM1P32464 399 aa1.29□□□□□ -2.2
SSF2YDR312W GSP2P32836 220 aaKnown RBP1.29□□□□□ -2.2
SSF2YDR312W CPR5P35176 225 aa1.29□□□□□ -2.2
SSF2YDR312W YKR041WP36134 250 aa1.29□□□□□ -2.2
SSF2YDR312W SRP14P38985 146 aa1.29□□□□□ -2.2
SSF2YDR312W YGL101WP53144 215 aa1.29□□□□□ -2.2
SSF2YDR312W THG1P53215 237 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms