RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W ORM1P53224 222 aa-1.16□□□□□ -2.6
HMRA1YCR097W MRPS12P53732 153 aa-1.16□□□□□ -2.6
HMRA1YCR097W HSK3P69852 69 aa-1.16□□□□□ -2.6
HMRA1YCR097W YLR050CQ12155 161 aaKnown RBP-1.16□□□□□ -2.6
HMRA1YCR097W RPL30P14120 105 aaKnown RBP-1.17□□□□□ -2.6
HMRA1YCR097W DLS1P40366 167 aa-1.17□□□□□ -2.6
HMRA1YCR097W PHB1P40961 287 aa-1.17□□□□□ -2.6
HMRA1YCR097W RAF1Q06891 181 aa-1.17□□□□□ -2.6
HMRA1YCR097W YGR240C-AQ3E786 66 aa-1.17□□□□□ -2.6
HMRA1YCR097W GSP1P32835 219 aaKnown RBP-1.18□□□□□ -2.6
HMRA1YCR097W LSM3P57743 89 aaKnown RBP-1.18□□□□□ -2.6
HMRA1YCR097W SOM1Q05676 74 aa-1.18□□□□□ -2.6
HMRA1YCR097W DDP1Q99321 188 aaKnown RBP-1.18□□□□□ -2.6
HMRA1YCR097W SNT2P53127 1403 aa-1.18□□□□□ -2.6
HMRA1YCR097W YRF1-3P0CX14 1859 aa-1.18□□□□□ -2.6
HMRA1YCR097W YRF1-7P0CX15 1859 aa-1.18□□□□□ -2.6
HMRA1YCR097W UBI4P0CG63 381 aaKnown RBP-1.19□□□□□ -2.6
HMRA1YCR097W YIL163CP40448 117 aa-1.19□□□□□ -2.6
HMRA1YCR097W BRP1P53194 125 aa-1.19□□□□□ -2.6
HMRA1YCR097W HHO1P53551 258 aa-1.19□□□□□ -2.6
HMRA1YCR097W JIP3O13555 125 aa-1.2□□□□□ -2.6
HMRA1YCR097W YER181CP40097 107 aa-1.2□□□□□ -2.6
HMRA1YCR097W YJL218WP40892 196 aaKnown RBP-1.2□□□□□ -2.6
HMRA1YCR097W YOR385WQ08909 290 aa-1.2□□□□□ -2.6
HMRA1YCR097W FCF2Q12035 217 aaPredicted RBP-1.2□□□□□ -2.6
HMRA1YCR097W GTT2Q12390 233 aa-1.2□□□□□ -2.6
HMRA1YCR097W UBR1P19812 1950 aa-1.21□□□□□ -2.6
HMRA1YCR097W YBR056W-AI2HB52 66 aa-1.21□□□□□ -2.6
HMRA1YCR097W CCW14O13547 238 aa-1.21□□□□□ -2.6
HMRA1YCR097W MRPL44P19956 98 aa-1.21□□□□□ -2.6
HMRA1YCR097W APA2P22108 325 aa-1.21□□□□□ -2.6
HMRA1YCR097W YGL149WP53116 101 aa-1.21□□□□□ -2.6
HMRA1YCR097W YDR476CQ03362 224 aa-1.21□□□□□ -2.6
HMRA1YCR097W ENV10Q99382 181 aa-1.21□□□□□ -2.6
HMRA1YCR097W RTC6O14464 93 aa-1.22□□□□□ -2.6
HMRA1YCR097W HAP3P13434 144 aa-1.22□□□□□ -2.6
HMRA1YCR097W ATP7P30902 174 aa-1.22□□□□□ -2.6
HMRA1YCR097W EGD2P38879 174 aaKnown RBP-1.22□□□□□ -2.6
HMRA1YCR097W AIM18P38884 321 aa-1.22□□□□□ -2.6
HMRA1YCR097W SGF11Q03067 99 aa-1.22□□□□□ -2.6
HMRA1YCR097W FIG1P38224 298 aa-1.23□□□□□ -2.61
HMRA1YCR097W APQ12P40532 138 aa-1.23□□□□□ -2.61
HMRA1YCR097W YGR017WP53210 297 aa-1.23□□□□□ -2.61
HMRA1YCR097W SEC72P39742 193 aaKnown RBP-1.24□□□□□ -2.61
HMRA1YCR097W EFM5P53200 248 aaKnown RBP-1.24□□□□□ -2.61
HMRA1YCR097W MAK3Q03503 176 aa-1.24□□□□□ -2.61
HMRA1YCR097W RAV2Q03956 351 aa-1.24□□□□□ -2.61
HMRA1YCR097W YGL041C-BQ3E750 60 aa-1.24□□□□□ -2.61
HMRA1YCR097W HSP12P22943 109 aaKnown RBP-1.25□□□□□ -2.61
HMRA1YCR097W YIP3P53633 176 aa-1.25□□□□□ -2.61
HMRA1YCR097W LSM1P47017 172 aaKnown RBP-1.26□□□□□ -2.61
HMRA1YCR097W LSM8P47093 109 aaKnown RBP-1.26□□□□□ -2.61
HMRA1YCR097W HPA2Q06592 156 aa-1.26□□□□□ -2.61
HMRA1YCR097W PBI2P0CT04 75 aaKnown RBP-1.27□□□□□ -2.61
HMRA1YCR097W YPR202WQ08993 238 aa-1.27□□□□□ -2.61
HMRA1YCR097W PET20Q99373 253 aa-1.27□□□□□ -2.61
HMRA1YCR097W RSF2P46974 1380 aa-1.27□□□□□ -2.61
HMRA1YCR097W RPS1AP33442 255 aaKnown RBP-1.28□□□□□ -2.61
HMRA1YCR097W PHS1P40857 217 aa-1.28□□□□□ -2.61
HMRA1YCR097W CWC21Q03375 135 aaKnown RBP-1.28□□□□□ -2.61
HMRA1YCR097W EFG1Q3E705 233 aaKnown RBP-1.28□□□□□ -2.61
HMRA1YCR097W UTP20P35194 2493 aaKnown RBP-1.28□□□□□ -2.61
HMRA1YCR097W TY4B-HP0C2J7 1802 aa-1.29□□□□□ -2.62
HMRA1YCR097W RPL36BO14455 100 aaKnown RBP-1.29□□□□□ -2.62
HMRA1YCR097W RPL36AP05745 100 aaPredicted RBP-1.29□□□□□ -2.62
HMRA1YCR097W ADK1P07170 222 aaKnown RBP-1.29□□□□□ -2.62
HMRA1YCR097W PAU21P0CE86 164 aa-1.29□□□□□ -2.62
HMRA1YCR097W PAU22P0CE87 164 aa-1.29□□□□□ -2.62
HMRA1YCR097W SPG1P50088 95 aa-1.29□□□□□ -2.62
HMRA1YCR097W SDH7Q04401 133 aa-1.29□□□□□ -2.62
HMRA1YCR097W YLR053CQ12026 108 aa-1.29□□□□□ -2.62
HMRA1YCR097W QCR10P37299 77 aa-1.3□□□□□ -2.62
HMRA1YCR097W PRS3P38689 320 aaKnown RBP-1.3□□□□□ -2.62
HMRA1YCR097W HSP10P38910 106 aa-1.3□□□□□ -2.62
HMRA1YCR097W RPO41P13433 1351 aaKnown RBP-1.31□□□□□ -2.62
HMRA1YCR097W RPL22AP05749 121 aaKnown RBP-1.31□□□□□ -2.62
HMRA1YCR097W GCV3P39726 170 aaPredicted RBP-1.31□□□□□ -2.62
HMRA1YCR097W YGR201CP42936 225 aa-1.31□□□□□ -2.62
HMRA1YCR097W TIM11P81449 96 aaPredicted RBP-1.31□□□□□ -2.62
HMRA1YCR097W ECM5Q03214 1411 aa-1.32□□□□□ -2.62
HMRA1YCR097W RPL35AP0CX84 120 aaKnown RBP-1.32□□□□□ -2.62
HMRA1YCR097W RPL35BP0CX85 120 aaKnown RBP-1.32□□□□□ -2.62
HMRA1YCR097W YBR016WP38216 128 aa-1.32□□□□□ -2.62
HMRA1YCR097W YPK9Q12697 1472 aa-1.32□□□□□ -2.62
HMRA1YCR097W YAP3P38749 330 aa-1.33□□□□□ -2.62
HMRA1YCR097W YFR009W-AP0C5M9 85 aa-1.34□□□□□ -2.62
HMRA1YCR097W SUI1P32911 108 aaKnown RBP-1.34□□□□□ -2.62
HMRA1YCR097W HPM1P40481 377 aa-1.34□□□□□ -2.62
HMRA1YCR097W RUB1Q03919 77 aa-1.34□□□□□ -2.62
HMRA1YCR097W QCR2P07257 368 aa-1.35□□□□□ -2.63
HMRA1YCR097W YNL198CP40166 100 aa-1.35□□□□□ -2.63
HMRA1YCR097W NSL1Q12143 216 aa-1.36□□□□□ -2.63
HMRA1YCR097W SHU1P38751 150 aa-1.37□□□□□ -2.63
HMRA1YCR097W YIL086CP40503 102 aa-1.38□□□□□ -2.63
HMRA1YCR097W GAT4P40569 121 aa-1.38□□□□□ -2.63
HMRA1YCR097W RPS28BP0C0X0 67 aaKnown RBP-1.39□□□□□ -2.63
HMRA1YCR097W GIM3P53900 129 aa-1.39□□□□□ -2.63
HMRA1YCR097W RPS28AQ3E7X9 67 aaPredicted RBP-1.39□□□□□ -2.63
HMRA1YCR097W YJL197C-AP0C5P0 93 aa-1.4□□□□□ -2.63
HMRA1YCR097W ARC19P33204 171 aaKnown RBP-1.4□□□□□ -2.63
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms