RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH3	YCR092C	CGR1	P53188	120 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	YLR031W	Q07978	186 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	PCC1	Q3E833	88 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	YER175W-A	Q8TGU4	54 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	ENV10	Q99382	181 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	PDX3	P38075	228 aa	Known RBP	0.94	□□□□□ -2.26
MSH3	YCR092C	PCL7	P40186	285 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	TIR3	P40552	269 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	KEG1	P43614	200 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	YJR085C	P47131	105 aa	Known RBP	0.94	□□□□□ -2.26
MSH3	YCR092C	YGR149W	P48236	432 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	YNR066C	P53752	436 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	SNZ1	Q03148	297 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	YMR090W	Q04304	227 aa	Known RBP	0.94	□□□□□ -2.26
MSH3	YCR092C	ARC18	Q05933	178 aa	Known RBP	0.94	□□□□□ -2.26
MSH3	YCR092C	COA3	Q3E7B2	85 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	YGR121W-A	Q3E816	71 aa		0.94	□□□□□ -2.26
MSH3	YCR092C	FRS1	P15624	595 aa	Known RBP	0.93	□□□□□ -2.26
MSH3	YCR092C	KTI12	P34253	313 aa	Known RBP	0.93	□□□□□ -2.26
MSH3	YCR092C	SUR2	P38992	349 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	PRE5	P40302	234 aa	Known RBP	0.93	□□□□□ -2.26
MSH3	YCR092C	TOS6	P48560	102 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	IMD3	P50095	523 aa	Known RBP	0.93	□□□□□ -2.26
MSH3	YCR092C	MGR2	Q02889	113 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	SHH3	Q04487	196 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	AVO2	Q04749	426 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	DPP1	Q05521	289 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	POS5	Q06892	414 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	YLR118C	Q12354	227 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	YOS1	Q3E834	85 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	ECM12	O13529	151 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	MBF1	O14467	151 aa	Known RBP	0.93	□□□□□ -2.26
MSH3	YCR092C	ADH2	P00331	348 aa	Known RBP	0.93	□□□□□ -2.26
MSH3	YCR092C	ANB1	P19211	157 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	NHP2	P32495	156 aa	Predicted RBP	0.93	□□□□□ -2.26
MSH3	YCR092C	YER135C	P40082	130 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	FMC1	P40491	155 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	YFR045W	P43617	309 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	SFT1	P43682	97 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	YJR146W	P47174	117 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	PNC1	P53184	216 aa	Known RBP	0.93	□□□□□ -2.26
MSH3	YCR092C	FMP48	P53233	369 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	YDR042C	Q03205	200 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	ATC1	Q04005	294 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	YMR252C	Q04814	134 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	YOL160W	Q08321	113 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	YOR192C-C	Q3E736	78 aa		0.93	□□□□□ -2.26
MSH3	YCR092C	NRG2	P38082	220 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	YBR242W	P38331	238 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	RRF1	P38771	230 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	AIM19	P40502	157 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	PHS1	P40857	217 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	GPI19	Q04082	140 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	RPL27A	P0C2H6	136 aa	Known RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	MRP2	P10663	115 aa	Predicted RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	RPS2	P25443	254 aa	Known RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	SDS23	P53172	527 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	PKR1	Q03880	122 aa	Known RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	DTD1	Q07648	150 aa	Known RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	YDL242W	Q07746	117 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	POM33	Q12164	279 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	TIR4	Q12218	487 aa	Predicted RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	TIM22	Q12328	207 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	RPS22B	Q3E7Y3	130 aa	Known RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	Q0017	Q9ZZX8	53 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	UTP20	P35194	2493 aa	Known RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	YBR085C-A	O43137	85 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	PFY1	P07274	126 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	AGA1	P32323	725 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	MRPS9	P38120	278 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	VPS28	Q02767	242 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	YFH1	Q07540	174 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	LCL2	Q08045	131 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	YOP1	Q12402	180 aa		0.92	□□□□□ -2.26
MSH3	YCR092C	PAA1	Q12447	191 aa	Known RBP	0.92	□□□□□ -2.26
MSH3	YCR092C	BPH1	P25356	2167 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	HYP2	P23301	157 aa	Known RBP	0.91	□□□□□ -2.26
MSH3	YCR092C	LDS1	P31379	325 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	MSK1	P32048	576 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	GDT1	P38301	280 aa	Predicted RBP	0.91	□□□□□ -2.26
MSH3	YCR092C	PAU7	P39545	55 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	VTC1	P40046	129 aa	RIP-Chip data	0.91	□□□□□ -2.26	not detected
MSH3	YCR092C	PAU5	P43575	122 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	PLP1	Q04004	230 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	YOL118C	Q08259	102 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	PPT2	Q12036	173 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	FCY1	Q12178	158 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	COX19	Q3E731	98 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	COA2	Q3E823	68 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	PCL2	P25693	308 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	TIR2	P33890	251 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	MBB1	P39534	108 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	SSO2	P39926	295 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	SER2	P42941	309 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	MGA1	P53050	456 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	YGL193C	P53097	103 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	YMR320W	Q04897	101 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	YOR105W	Q08504	108 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	YDR029W	Q12111	104 aa		0.91	□□□□□ -2.26
MSH3	YCR092C	ERV2	Q12284	196 aa		0.91	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms