RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W SUI1P32911 108 aaKnown RBP1.26□□□□□ -2.21
PAF1YBR279W YMR141CP40211 102 aa1.26□□□□□ -2.21
PAF1YBR279W ATP14Q12349 124 aa1.26□□□□□ -2.21
PAF1YBR279W KTI11Q3E840 82 aa1.26□□□□□ -2.21
PAF1YBR279W RPO41P13433 1351 aaKnown RBP1.26□□□□□ -2.21
PAF1YBR279W RPS1BP23248 255 aaKnown RBP1.25□□□□□ -2.21
PAF1YBR279W FYV5P25585 152 aa1.25□□□□□ -2.21
PAF1YBR279W RPS20P38701 121 aaKnown RBP1.25□□□□□ -2.21
PAF1YBR279W SPG1P50088 95 aa1.25□□□□□ -2.21
PAF1YBR279W YNL019CP53975 284 aa1.25□□□□□ -2.21
PAF1YBR279W YMR122CQ03879 124 aa1.25□□□□□ -2.21
PAF1YBR279W SDH7Q04401 133 aa1.25□□□□□ -2.21
PAF1YBR279W YNL277W-AQ3E7Z0 62 aa1.25□□□□□ -2.21
PAF1YBR279W COA6Q3E846 104 aa1.25□□□□□ -2.21
PAF1YBR279W LSM8P47093 109 aaKnown RBP1.24□□□□□ -2.21
PAF1YBR279W SPC24Q04477 213 aa1.24□□□□□ -2.21
PAF1YBR279W NAT5Q08689 176 aa1.24□□□□□ -2.21
PAF1YBR279W RAD50P12753 1312 aa1.24□□□□□ -2.21
PAF1YBR279W ANB1P19211 157 aa1.23□□□□□ -2.21
PAF1YBR279W EMC4P53073 190 aa1.23□□□□□ -2.21
PAF1YBR279W YMR320WQ04897 101 aa1.23□□□□□ -2.21
PAF1YBR279W YHR140WP38842 239 aa1.22□□□□□ -2.21
PAF1YBR279W SOM1Q05676 74 aa1.22□□□□□ -2.21
PAF1YBR279W NKP2Q06162 153 aa1.22□□□□□ -2.21
PAF1YBR279W CNL1Q06333 122 aa1.22□□□□□ -2.21
PAF1YBR279W YIR021W-AQ3E739 70 aa1.22□□□□□ -2.21
PAF1YBR279W DDP1Q99321 188 aaKnown RBP1.22□□□□□ -2.21
PAF1YBR279W Q0144Q9ZZW2 109 aa1.22□□□□□ -2.21
PAF1YBR279W MYO2P19524 1574 aaKnown RBP1.22□□□□□ -2.21
PAF1YBR279W FUN14P18411 198 aa1.21□□□□□ -2.22
PAF1YBR279W RPS1AP33442 255 aaKnown RBP1.21□□□□□ -2.22
PAF1YBR279W VMA7P39111 118 aa1.21□□□□□ -2.22
PAF1YBR279W TIM8P57744 87 aa1.21□□□□□ -2.22
PAF1YBR279W AIM11P87275 137 aa1.21□□□□□ -2.22
PAF1YBR279W LST8P41318 303 aa1.2□□□□□ -2.22
PAF1YBR279W YGR017WP53210 297 aa1.2□□□□□ -2.22
PAF1YBR279W APS2Q00381 147 aa1.2□□□□□ -2.22
PAF1YBR279W FRQ1Q06389 190 aa1.2□□□□□ -2.22
PAF1YBR279W MPC1P53157 130 aaKnown RBP1.19□□□□□ -2.22
PAF1YBR279W YHR213WP0CI67 198 aa1.18□□□□□ -2.22
PAF1YBR279W MRPL44P19956 98 aa1.18□□□□□ -2.22
PAF1YBR279W MRP49P32388 137 aa1.18□□□□□ -2.22
PAF1YBR279W SFT2P38166 215 aa1.18□□□□□ -2.22
PAF1YBR279W SFT1P43682 97 aa1.18□□□□□ -2.22
PAF1YBR279W ARL3Q02804 198 aa1.18□□□□□ -2.22
PAF1YBR279W WIP1Q2V2P8 89 aa1.18□□□□□ -2.22
PAF1YBR279W NMT1P14743 455 aa1.17□□□□□ -2.22
PAF1YBR279W HPM1P40481 377 aa1.17□□□□□ -2.22
PAF1YBR279W PHS1P40857 217 aa1.17□□□□□ -2.22
PAF1YBR279W ELC1Q03071 99 aa1.17□□□□□ -2.22
PAF1YBR279W YLR118CQ12354 227 aa1.17□□□□□ -2.22
PAF1YBR279W UBR1P19812 1950 aa1.17□□□□□ -2.22
PAF1YBR279W RPL43AP0CX25 92 aaKnown RBP1.16□□□□□ -2.22
PAF1YBR279W RPL43BP0CX26 92 aa1.16□□□□□ -2.22
PAF1YBR279W GAT4P40569 121 aa1.16□□□□□ -2.22
PAF1YBR279W MVB12P42939 101 aa1.16□□□□□ -2.22
PAF1YBR279W COA4Q05809 96 aa1.16□□□□□ -2.22
PAF1YBR279W SNT2P53127 1403 aa1.16□□□□□ -2.22
PAF1YBR279W PFY1P07274 126 aa1.15□□□□□ -2.22
PAF1YBR279W RPL14AP36105 138 aaKnown RBP1.15□□□□□ -2.22
PAF1YBR279W RPL14BP38754 138 aaKnown RBP1.15□□□□□ -2.22
PAF1YBR279W YPL067CQ02754 198 aa1.15□□□□□ -2.22
PAF1YBR279W YOR385WQ08909 290 aa1.15□□□□□ -2.22
PAF1YBR279W SPP41P38904 1435 aa1.15□□□□□ -2.22
PAF1YBR279W GSP1P32835 219 aaKnown RBP1.15□□□□□ -2.23
PAF1YBR279W YLR099W-AQ3E798 87 aa1.15□□□□□ -2.23
PAF1YBR279W YOR304C-AO14468 76 aa1.14□□□□□ -2.23
PAF1YBR279W RGI1P40043 161 aaPredicted RBP1.14□□□□□ -2.23
PAF1YBR279W CDC39P25655 2108 aaKnown RBP1.13□□□□□ -2.23
PAF1YBR279W TSC11P40061 1430 aa1.13□□□□□ -2.23
PAF1YBR279W YCR050CP25630 102 aa1.13□□□□□ -2.23
PAF1YBR279W HYM1P32464 399 aa1.13□□□□□ -2.23
PAF1YBR279W SAE3P89114 91 aa1.13□□□□□ -2.23
PAF1YBR279W LDB18Q07887 179 aa1.13□□□□□ -2.23
PAF1YBR279W FCF2Q12035 217 aaPredicted RBP1.13□□□□□ -2.23
PAF1YBR279W YOR097CQ12274 175 aaPredicted RBP1.13□□□□□ -2.23
PAF1YBR279W TOP2P06786 1428 aaKnown RBP1.12□□□□□ -2.23
PAF1YBR279W UTP11P34247 250 aaPredicted RBP1.12□□□□□ -2.23
PAF1YBR279W YGR164WP53291 111 aa1.12□□□□□ -2.23
PAF1YBR279W TVP18Q04767 167 aa1.12□□□□□ -2.23
PAF1YBR279W FIT3Q08907 204 aa1.12□□□□□ -2.23
PAF1YBR279W HUG1Q6Q5K6 68 aa1.12□□□□□ -2.23
PAF1YBR279W PAU21P0CE86 164 aa1.11□□□□□ -2.23
PAF1YBR279W PAU22P0CE87 164 aa1.11□□□□□ -2.23
PAF1YBR279W YCR099CP25657 155 aa1.11□□□□□ -2.23
PAF1YBR279W QCR10P37299 77 aa1.11□□□□□ -2.23
PAF1YBR279W RPB11P38902 120 aa1.11□□□□□ -2.23
PAF1YBR279W RPS12P48589 143 aaKnown RBP1.11□□□□□ -2.23
PAF1YBR279W BRP1P53194 125 aa1.11□□□□□ -2.23
PAF1YBR279W RUB1Q03919 77 aa1.11□□□□□ -2.23
PAF1YBR279W YLR307C-AQ3E825 87 aa1.11□□□□□ -2.23
PAF1YBR279W YER039C-AP0CD97 72 aa1.1□□□□□ -2.23
PAF1YBR279W MRPL11P36521 249 aaPredicted RBP1.1□□□□□ -2.23
PAF1YBR279W TRS20P38334 175 aa1.1□□□□□ -2.23
PAF1YBR279W YAL064WP39711 94 aa1.1□□□□□ -2.23
PAF1YBR279W YGL149WP53116 101 aa1.1□□□□□ -2.23
PAF1YBR279W YMR321CQ04898 105 aa1.1□□□□□ -2.23
PAF1YBR279W YOR289WQ12012 251 aaPredicted RBP1.1□□□□□ -2.23
PAF1YBR279W GTT2Q12390 233 aa1.1□□□□□ -2.23
PAF1YBR279W TRM732Q03496 1420 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms