RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W MRPL44P19956 98 aa1.12□□□□□ -2.23
SNC1YAL030W HSP150P32478 413 aa1.12□□□□□ -2.23
SNC1YAL030W ATG8P38182 117 aaRIP-Chip data1.12□□□□□ -2.23not detected
SNC1YAL030W VMA7P39111 118 aa1.12□□□□□ -2.23
SNC1YAL030W PHS1P40857 217 aa1.12□□□□□ -2.23
SNC1YAL030W YGL149WP53116 101 aa1.12□□□□□ -2.23
SNC1YAL030W SAE3P89114 91 aa1.12□□□□□ -2.23
SNC1YAL030W VAM10Q08474 114 aa1.12□□□□□ -2.23
SNC1YAL030W DDP1Q99321 188 aaKnown RBP1.12□□□□□ -2.23
SNC1YAL030W HSL1P34244 1518 aa1.11□□□□□ -2.23
SNC1YAL030W QCR10P37299 77 aa1.11□□□□□ -2.23
SNC1YAL030W DCV1P43595 202 aa1.11□□□□□ -2.23
SNC1YAL030W SFT1P43682 97 aa1.11□□□□□ -2.23
SNC1YAL030W YPL067CQ02754 198 aa1.11□□□□□ -2.23
SNC1YAL030W FRQ1Q06389 190 aa1.11□□□□□ -2.23
SNC1YAL030W ECM5Q03214 1411 aa1.1□□□□□ -2.23
SNC1YAL030W FUN14P18411 198 aa1.1□□□□□ -2.23
SNC1YAL030W SFT2P38166 215 aa1.1□□□□□ -2.23
SNC1YAL030W YBR027CP38220 110 aa1.1□□□□□ -2.23
SNC1YAL030W YHL037CP38733 133 aa1.1□□□□□ -2.23
SNC1YAL030W MPC1P53157 130 aaKnown RBP1.1□□□□□ -2.23
SNC1YAL030W SEN15Q04675 128 aa1.1□□□□□ -2.23
SNC1YAL030W YLR099W-AQ3E798 87 aa1.1□□□□□ -2.23
SNC1YAL030W RPO41P13433 1351 aaKnown RBP1.09□□□□□ -2.23
SNC1YAL030W HAP3P13434 144 aa1.09□□□□□ -2.23
SNC1YAL030W HSP10P38910 106 aa1.09□□□□□ -2.23
SNC1YAL030W YMR007WQ03675 126 aa1.09□□□□□ -2.23
SNC1YAL030W KTI11Q3E840 82 aa1.09□□□□□ -2.23
SNC1YAL030W RPL33AP05744 107 aaKnown RBP1.08□□□□□ -2.24
SNC1YAL030W YGL014C-AP0C5N1 53 aa1.08□□□□□ -2.24
SNC1YAL030W YFL051CP43552 160 aa1.08□□□□□ -2.24
SNC1YAL030W ERV14P53173 138 aa1.08□□□□□ -2.24
SNC1YAL030W AIM11P87275 137 aa1.08□□□□□ -2.24
SNC1YAL030W APS2Q00381 147 aa1.08□□□□□ -2.24
SNC1YAL030W SED1Q01589 338 aa1.08□□□□□ -2.24
SNC1YAL030W SPC24Q04477 213 aa1.08□□□□□ -2.24
SNC1YAL030W YLR118CQ12354 227 aa1.08□□□□□ -2.24
SNC1YAL030W GTT2Q12390 233 aa1.08□□□□□ -2.24
SNC1YAL030W TY1B-HO13535 1793 aa1.08□□□□□ -2.24
SNC1YAL030W TRM732Q03496 1420 aa1.07□□□□□ -2.24
SNC1YAL030W URB1P34241 1764 aaKnown RBP1.07□□□□□ -2.24
SNC1YAL030W PAU21P0CE86 164 aa1.07□□□□□ -2.24
SNC1YAL030W PAU22P0CE87 164 aa1.07□□□□□ -2.24
SNC1YAL030W RPL40AP0CH08 128 aaKnown RBP1.07□□□□□ -2.24
SNC1YAL030W RPL40BP0CH09 128 aaKnown RBP1.07□□□□□ -2.24
SNC1YAL030W NMT1P14743 455 aa1.07□□□□□ -2.24
SNC1YAL030W ANB1P19211 157 aa1.07□□□□□ -2.24
SNC1YAL030W SEC59P20048 519 aa1.07□□□□□ -2.24
SNC1YAL030W UTP11P34247 250 aaPredicted RBP1.07□□□□□ -2.24
SNC1YAL030W BRP1P53194 125 aa1.07□□□□□ -2.24
SNC1YAL030W AIM36Q03798 255 aa1.07□□□□□ -2.24
SNC1YAL030W SNT2P53127 1403 aa1.06□□□□□ -2.24
SNC1YAL030W YRF1-6P53819 1859 aa1.06□□□□□ -2.24
SNC1YAL030W ADK1P07170 222 aaKnown RBP1.06□□□□□ -2.24
SNC1YAL030W MRPL11P36521 249 aaPredicted RBP1.06□□□□□ -2.24
SNC1YAL030W RPB11P38902 120 aa1.06□□□□□ -2.24
SNC1YAL030W YAR064WP39563 99 aa1.06□□□□□ -2.24
SNC1YAL030W GAT4P40569 121 aa1.06□□□□□ -2.24
SNC1YAL030W YMR122CQ03879 124 aa1.06□□□□□ -2.24
SNC1YAL030W IRC21Q04772 201 aa1.06□□□□□ -2.24
SNC1YAL030W YLR296WQ05898 108 aa1.06□□□□□ -2.24
SNC1YAL030W LDB18Q07887 179 aa1.06□□□□□ -2.24
SNC1YAL030W LCL2Q08045 131 aa1.06□□□□□ -2.24
SNC1YAL030W FCF2Q12035 217 aaPredicted RBP1.06□□□□□ -2.24
SNC1YAL030W CCW12Q12127 133 aa1.06□□□□□ -2.24
SNC1YAL030W LAA1P39526 2014 aa1.05□□□□□ -2.24
SNC1YAL030W YHR213WP0CI67 198 aa1.05□□□□□ -2.24
SNC1YAL030W UGX2P32772 223 aa1.05□□□□□ -2.24
SNC1YAL030W YKL044WP36092 106 aa1.05□□□□□ -2.24
SNC1YAL030W SRL3P36167 246 aa1.05□□□□□ -2.24
SNC1YAL030W TDA2P40045 126 aa1.05□□□□□ -2.24
SNC1YAL030W YIL102CP40488 101 aa1.05□□□□□ -2.24
SNC1YAL030W YOR376W-AQ3E805 51 aa1.05□□□□□ -2.24
SNC1YAL030W MED11Q99278 115 aa1.05□□□□□ -2.24
SNC1YAL030W MYO1P08964 1928 aa1.05□□□□□ -2.24
SNC1YAL030W YOR304C-AO14468 76 aa1.04□□□□□ -2.24
SNC1YAL030W HAP2P06774 265 aa1.04□□□□□ -2.24
SNC1YAL030W SNF11P38956 169 aa1.04□□□□□ -2.24
SNC1YAL030W LST8P41318 303 aa1.04□□□□□ -2.24
SNC1YAL030W GPI19Q04082 140 aa1.04□□□□□ -2.24
SNC1YAL030W HPA2Q06592 156 aa1.04□□□□□ -2.24
SNC1YAL030W YIR021W-AQ3E739 70 aa1.04□□□□□ -2.24
SNC1YAL030W MDS3P53094 1487 aa1.04□□□□□ -2.24
SNC1YAL030W RPL36BO14455 100 aaKnown RBP1.03□□□□□ -2.24
SNC1YAL030W RPL36AP05745 100 aaPredicted RBP1.03□□□□□ -2.24
SNC1YAL030W AIM18P38884 321 aa1.03□□□□□ -2.24
SNC1YAL030W RUB1Q03919 77 aa1.03□□□□□ -2.24
SNC1YAL030W YOR072WQ08486 104 aa1.03□□□□□ -2.24
SNC1YAL030W PRM3Q08931 133 aa1.03□□□□□ -2.24
SNC1YAL030W SPP41P38904 1435 aa1.03□□□□□ -2.24
SNC1YAL030W PFY1P07274 126 aa1.02□□□□□ -2.25
SNC1YAL030W YOL013W-AP0C272 63 aaPredicted RBP1.02□□□□□ -2.25
SNC1YAL030W GSP1P32835 219 aaKnown RBP1.02□□□□□ -2.25
SNC1YAL030W AIM4P38305 123 aaPredicted RBP1.02□□□□□ -2.25
SNC1YAL030W YAR029WP39549 74 aa1.02□□□□□ -2.25
SNC1YAL030W ARL3Q02804 198 aa1.02□□□□□ -2.25
SNC1YAL030W COA4Q05809 96 aa1.02□□□□□ -2.25
SNC1YAL030W YLR042CQ07990 161 aa1.02□□□□□ -2.25
SNC1YAL030W RTR2Q12378 196 aa1.02□□□□□ -2.25
SNC1YAL030W RTC6O14464 93 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms