RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 DNPEPQ9ULA0 475 aa17.36■□□□□ 0.37
SCARB2-210ENST00000638567 SUPT20HL2P0C7V6 817 aa17.36■□□□□ 0.37
SCARB2-210ENST00000638567 PRAMEP78395 509 aa17.36■□□□□ 0.37
SCARB2-210ENST00000638567 C1QBPQ07021 282 aaKnown RBP17.36■□□□□ 0.37
SCARB2-210ENST00000638567 TMEM62Q0P6H9 643 aa17.36■□□□□ 0.37
SCARB2-210ENST00000638567 KYAT1Q16773 422 aa17.36■□□□□ 0.37
SCARB2-210ENST00000638567 DUPD1Q68J44 220 aa17.36■□□□□ 0.37
SCARB2-210ENST00000638567 TMEM237Q96Q45 408 aa17.36■□□□□ 0.37
SCARB2-210ENST00000638567 CYP3A7-CYP3A51PA0A087WV96 503 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 DNALI1O14645 258 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 PSMD10O75832 226 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 NOL4O94818 638 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 MYL3P08590 195 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 CYP3A4P08684 503 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 CYP3A7P24462 503 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 RRP1BQ14684 758 aaKnown RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 USP10Q14694 798 aaKnown RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 CYTH1Q15438 398 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 GOLGA7BQ2TAP0 167 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 ZNF669Q96BR6 464 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 TMA16Q96EY4 203 aaKnown RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 FRMD8Q9BZ67 464 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 TSPYL2Q9H2G4 693 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 DCLRE1BQ9H816 532 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 PCDH9Q9HC56 1237 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 PXMP2Q9NR77 195 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 SLIT3O75094 1523 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 ADAMTS3O15072 1205 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 SNX3O60493 162 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 ALDH5A1P51649 535 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 USP33Q8TEY7 942 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 CMTM5Q96DZ9 223 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 NAF1Q96HR8 494 aaKnown RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 IDI2Q9BXS1 227 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 TASP1Q9H6P5 420 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 SHOC2Q9UQ13 582 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 PIN4Q9Y237 131 aaKnown RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 DFFAO00273 331 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 SPRP35270 261 aaPredicted RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 DYNC1I2Q13409 638 aaKnown RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 DCAF6Q58WW2 860 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 CERS5Q8N5B7 392 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 EPAS1Q99814 870 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 ARHGEF37A1IGU5 675 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 RBAK-RBAKDNI3L0D1 243 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 AGPSO00116 658 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 PYGBP11216 843 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 BGNP21810 368 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 CNGA2Q16280 664 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 SPDYCQ5MJ68 293 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 ETNPPLQ8TBG4 499 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
SCARB2-210ENST00000638567 WDR18Q9BV38 432 aa17.35■□□□□ 0.37
SCARB2-210ENST00000638567 NFAT5O94916 1531 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 POLBP06746 335 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 RARBP10826 455 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 TSTA3Q13630 321 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 FOXR2Q6PJQ5 311 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 MKL1Q969V6 931 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 SH3GL2Q99962 352 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 SH3GL3Q99963 347 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 ZNF518BQ9C0D4 1074 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 XAB2Q9HCS7 855 aaKnown RBP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 MRPL40Q9NQ50 206 aaKnown RBP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 RGL2O15211 777 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 ZSCAN5DPP0CG00 497 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 VCAM1P19320 739 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 PGM5Q15124 567 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 PLEKHA5Q9HAU0 1116 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 AVENQ9NQS1 362 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 ASB14A6NK59 587 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 C3orf70A6NLC5 250 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 TTC36A6NLP5 189 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 GCLCP48506 637 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 ELF3P78545 371 aaPredicted RBP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 NSUN2Q08J23 767 aaKnown RBP eCLIP17.34■□□□□ 0.37
SCARB2-210ENST00000638567 BMPR2Q13873 1038 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 CXorf38Q8TB03 319 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 TRIM15Q9C019 465 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 ELP3Q9H9T3 547 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 PCYOX1Q9UHG3 505 aa17.34■□□□□ 0.37
SCARB2-210ENST00000638567 FECHP22830 423 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 PTPN4P29074 926 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 RAP1GAPP47736 663 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 CLCN3P51790 818 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 NLRP11P59045 1033 aaKnown RBP17.33■□□□□ 0.37
SCARB2-210ENST00000638567 LRRC8EQ6NSJ5 796 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 TCP10LQ8TDR4 215 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 HSD17B14Q9BPX1 270 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 MRC1P22897 1456 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 SKAP2O75563 359 aaPredicted RBP17.33■□□□□ 0.37
SCARB2-210ENST00000638567 CBX6O95503 412 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 DRD4P21917 467 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 IRX1P78414 480 aaPredicted RBP17.33■□□□□ 0.37
SCARB2-210ENST00000638567 SLC26A11Q86WA9 606 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 APPL2Q8NEU8 664 aa17.33■□□□□ 0.37
SCARB2-210ENST00000638567 CENPTQ96BT3 561 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms