RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 MTMR12Q9C0I1 747 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 TMEM206Q9H813 350 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 HPS4Q9NQG7 708 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 THG1LQ9NWX6 298 aaKnown RBP11.99□□□□□ -0.49
TARDBP-221ENST00000619555 GTF3C4Q9UKN8 822 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 ITGA11Q9UKX5 1188 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 RAB23Q9ULC3 237 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 PCDHA7Q9UN72 937 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 SNX9Q9Y5X1 595 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 OBSL1O75147 1896 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 SPAG17Q6Q759 2223 aa11.99□□□□□ -0.49
TARDBP-221ENST00000619555 ACACBO00763 2458 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 PTPRJQ12913 1337 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 OTOL1A6NHN0 477 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-221ENST00000619555 PAPSS2O95340 614 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-221ENST00000619555 TMEM191BP0C7N4 346 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 CSH1P0DML2 217 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 CSH2P0DML3 217 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 HOXD13P35453 343 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 AVPR1AP37288 418 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 ATXN1P54253 815 aaKnown RBP11.98□□□□□ -0.49
TARDBP-221ENST00000619555 SPEM2Q0P670 501 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 SIM2Q14190 667 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-221ENST00000619555 ATL3Q6DD88 541 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 PKN3Q6P5Z2 889 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 MON1AQ86VX9 555 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 CBWD2Q8IUF1 395 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 CCDC65Q8IXS2 484 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 TMEM86AQ8N2M4 240 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 GPD1LQ8N335 351 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 OR5B17Q8NGF7 314 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 LEO1Q8WVC0 666 aaPredicted RBP11.98□□□□□ -0.49
TARDBP-221ENST00000619555 MRPS31Q92665 395 aaKnown RBP11.98□□□□□ -0.49
TARDBP-221ENST00000619555 CHFRQ96EP1 664 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 EBF3Q9H4W6 596 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 TDP1Q9NUW8 608 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 INTS13Q9NVM9 706 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 GDAP2Q9NXN4 497 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 RCOR1Q9UKL0 485 aa11.98□□□□□ -0.49
TARDBP-221ENST00000619555 GABRDO14764 452 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 CUTAO60888 179 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 ATP2C2O75185 946 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 TADA3O75528 432 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 NOL4O94818 638 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 ARSAP15289 507 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 DDX6P26196 483 aaKnown RBP eCLIP11.97□□□□□ -0.495e-34■□□□□ 10
TARDBP-221ENST00000619555 ANP32AP39687 249 aaKnown RBP11.97□□□□□ -0.49
TARDBP-221ENST00000619555 LHX1P48742 406 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 RPL10AP62906 217 aaKnown RBP11.97□□□□□ -0.49
TARDBP-221ENST00000619555 LMNB2Q03252 620 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 RUNX3Q13761 415 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 SOWAHAQ2M3V2 549 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 LAIR1Q6GTX8 287 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 FSTL4Q6MZW2 842 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 LONP2Q86WA8 852 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 SCN4BQ8IWT1 228 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 ADGRF2Q8IZF7 708 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 SYNPOQ8N3V7 929 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 TOP6BLQ8N6T0 577 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 HPDLQ96IR7 371 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 CYP2S1Q96SQ9 504 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 ABCB6Q9NP58 842 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 ZMYM5Q9UJ78 669 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 CFAP45Q9UL16 551 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 ANAPC1Q9H1A4 1944 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 EPG5Q9HCE0 2579 aa11.97□□□□□ -0.49
TARDBP-221ENST00000619555 CACNA1BQ00975 2339 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 ZNF233A6NK53 670 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 PRR5-ARHGAP8B1AHC4 643 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 RETP07949 1114 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 LMO2P25791 158 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 PCSK1P29120 753 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 KRT85P78386 507 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 NUCB2P80303 420 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 ARHGAP8P85298 464 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 E2F4Q16254 413 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 TMEM196Q5HYL7 178 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 NAIF1Q69YI7 327 aaPredicted RBP11.96□□□□□ -0.49
TARDBP-221ENST00000619555 CC2D1AQ6P1N0 951 aaPredicted RBP11.96□□□□□ -0.49
TARDBP-221ENST00000619555 FAM171BQ6P995 826 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 LIMS2Q7Z4I7 341 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 SPATA2LQ8IUW3 424 aaPredicted RBP11.96□□□□□ -0.49
TARDBP-221ENST00000619555 TTC16Q8NEE8 873 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 SPATA18Q8TC71 538 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 KBTBD7Q8WVZ9 684 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 DHX58Q96C10 678 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 ANKRD36BP1Q96IX9 119 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 MYRFLQ96LU7 910 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 SLC22A12Q96S37 553 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 TRIM9Q9C026 710 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 TNMDQ9H2S6 317 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 FBRSL1Q9HCM7 1045 aaKnown RBP11.96□□□□□ -0.49
TARDBP-221ENST00000619555 TRPC7Q9HCX4 862 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 KBTBD4Q9NVX7 518 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 POLR3BQ9NW08 1133 aaPredicted RBP11.96□□□□□ -0.49
TARDBP-221ENST00000619555 HSPBP1Q9NZL4 362 aa11.96□□□□□ -0.49
TARDBP-221ENST00000619555 R3HCC1Q9Y3T6 440 aaKnown RBP11.96□□□□□ -0.49
TARDBP-221ENST00000619555 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.49
TARDBP-221ENST00000619555 GREB1Q4ZG55 1949 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms