RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NFE2Q16621 373 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 FAM26FQ5R3K3 315 aa18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 PRR23CQ6ZRP0 262 aa18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 KIF9Q9HAQ2 790 aa18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 GKN1Q9NS71 199 aa18.85■□□□□ 0.61
SHKBP1-203ENST00000594298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 CCDC163A0A0D9SF12 145 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 DCDC2BA2VCK2 349 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 EIF3DO15371 548 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 CDR1P51861 262 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 TSPY1Q01534 308 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 CUL4BQ13620 913 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 RUNX3Q13761 415 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 TMEM196Q5HYL7 178 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 HEATR6Q6AI08 1181 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 USP13Q92995 863 aaPredicted RBP18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 ACBD6Q9BR61 282 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 ABCB6Q9NP58 842 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 HPS4Q9NQG7 708 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 TDP1Q9NUW8 608 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 TMLHEQ9NVH6 421 aa18.84■□□□□ 0.61
SHKBP1-203ENST00000594298 TRDMT1O14717 391 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 PRPF6O94906 941 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 ZNF202O95125 648 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 LDHAP00338 332 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 CSH1P0DML2 217 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 CSH2P0DML3 217 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 WNT7BP56706 349 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 KCNA1Q09470 495 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 GRSF1Q12849 480 aaKnown RBP eCLIP18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 BFSP1Q12934 665 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 PSMD2Q13200 908 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 ZNF268Q14587 947 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 KRBA2Q6ZNG9 492 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 MON1AQ86VX9 555 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 BRSK2Q8IWQ3 736 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 PDCL2Q8N4E4 241 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 FAM160A2Q8N612 972 aaPredicted RBP18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 LRRC52Q8N7C0 313 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 MAB21L3Q8N8X9 362 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 C1orf127Q8N9H9 656 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 SPATA18Q8TC71 538 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 CHFRQ96EP1 664 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 FAM213AQ9BRX8 229 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 EXOC1Q9NV70 894 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 CCL26Q9Y258 94 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 NCOR2Q9Y618 2525 aa18.83■□□□□ 0.6
SHKBP1-203ENST00000594298 UBE4BO95155 1302 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 OTOL1A6NHN0 477 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 KIAA0391O15091 583 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 EXTL3O43909 919 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 ATG13O75143 517 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 PRPF40AO75400 957 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 ITGB3P05106 788 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 GARTP22102 1010 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 POLR2BP30876 1174 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 CASP5P51878 434 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 SNRPFP62306 86 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 TFAMQ00059 246 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 AMPD2Q01433 879 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 TXNDC8Q6A555 127 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 FSTL4Q6MZW2 842 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 CEP68Q76N32 757 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 GRAMD1CQ8IYS0 662 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 TMEM86AQ8N2M4 240 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 CXorf38Q8TB03 319 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 ZNF507Q8TCN5 953 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 CACTINQ8WUQ7 758 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 MRPS31Q92665 395 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 TRMT2BQ96GJ1 504 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 LOXL4Q96JB6 756 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 CNTNAP3BQ96NU0 1288 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 PKMYT1Q99640 499 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 PI4K2AQ9BTU6 479 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 CNTNAP3Q9BZ76 1288 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 EBF3Q9H4W6 596 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 GDAP2Q9NXN4 497 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 DDX43Q9NXZ2 648 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 UXTQ9UBK9 157 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 L1RE1Q9UN81 338 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 AGAP1Q9UPQ3 857 aa18.82■□□□□ 0.6
SHKBP1-203ENST00000594298 SCN1AP35498 2009 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 NOL4O94818 638 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 ADRB1P08588 477 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 CASP1P29466 404 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 HOXC13P31276 330 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 GPR15P49685 360 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 RPL10AP62906 217 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 PDGFRLQ15198 375 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 INTS6LQ5JSJ4 861 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 TRIM68Q6AZZ1 485 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 PKN3Q6P5Z2 889 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 RIN3Q8TB24 985 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 GAB3Q8WWW8 586 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 MYRFLQ96LU7 910 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 GOLPH3LQ9H4A5 285 aa18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 RBAKQ9NYW8 714 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-203ENST00000594298 ITGA11Q9UKX5 1188 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms