RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 CHAMP1Q96JM3 812 aa6.96□□□□□ -1.3
TRIM25-209ENST00000574997 SPATA17Q96L03 361 aa6.96□□□□□ -1.3
TRIM25-209ENST00000574997 P2RY13Q9BPV8 354 aa6.96□□□□□ -1.3
TRIM25-209ENST00000574997 LPIN3Q9BQK8 851 aa6.96□□□□□ -1.3
TRIM25-209ENST00000574997 STRA6Q9BX79 667 aa6.96□□□□□ -1.3
TRIM25-209ENST00000574997 MRPL44Q9H9J2 332 aaKnown RBP6.96□□□□□ -1.3
TRIM25-209ENST00000574997 RBM12Q9NTZ6 932 aaKnown RBP6.96□□□□□ -1.3
TRIM25-209ENST00000574997 DDX43Q9NXZ2 648 aaKnown RBP6.96□□□□□ -1.3
TRIM25-209ENST00000574997 ABI2Q9NYB9 513 aaPredicted RBP6.96□□□□□ -1.3
TRIM25-209ENST00000574997 ANGPTL2Q9UKU9 493 aa6.96□□□□□ -1.3
TRIM25-209ENST00000574997 TCHHQ07283 1943 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 GREB1Q4ZG55 1949 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 ZNF638Q14966 1978 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 ANKRD63C9JTQ0 380 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SLC9A3R1O14745 358 aaPredicted RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 GABRDO14764 452 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 AXIN1O15169 862 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 EXTL3O43909 919 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 PPP1R37O75864 691 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 PRAMEF12O95522 483 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 APBB3O95704 486 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 NMT1P30419 496 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 ADSSP30520 456 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 GJA4P35212 333 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SOX9P48436 509 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SNRPFP62306 86 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 AMPD3Q01432 767 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 TNK2Q07912 1038 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 MTF1Q14872 753 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SF3A1Q15459 793 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 LPAL2Q16609 132 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 ZC2HC1CQ53FD0 456 aaPredicted RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 USP39Q53GS9 565 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 INTS6LQ5JSJ4 861 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SPDYCQ5MJ68 293 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 L1TD1Q5T7N2 865 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 HEATR6Q6AI08 1181 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 FSTL4Q6MZW2 842 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 FAM171BQ6P995 826 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 Q6ZS52 159 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 NUDT18Q6ZVK8 323 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 TMEM150AQ86TG1 271 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SPATA2LQ8IUW3 424 aaPredicted RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 BRSK2Q8IWQ3 736 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SYCP3Q8IZU3 236 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 PDCL2Q8N4E4 241 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 CSGALNACT2Q8N6G5 542 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SPRYD3Q8NCJ5 442 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 KCNV2Q8TDN2 545 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 GIPC2Q8TF65 315 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 CD101Q93033 1021 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 ZFYVE19Q96K21 471 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 LSM14BQ9BX40 385 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 ARRDC1-AS1Q9H2J1 176 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 EBF3Q9H4W6 596 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 ECT2Q9H8V3 914 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 DUS2Q9NX74 493 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 RBAKQ9NYW8 714 aaPredicted RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 MAGEC2Q9UBF1 373 aaPredicted RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 CDH9Q9ULB4 789 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 AGAP1Q9UPQ3 857 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SSUH2Q9Y2M2 353 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SRPRBQ9Y5M8 271 aaKnown RBP6.95□□□□□ -1.3
TRIM25-209ENST00000574997 NCANO14594 1321 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SPEGQ15772 3267 aa6.95□□□□□ -1.3
TRIM25-209ENST00000574997 SCN1AP35498 2009 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 IGF2RP11717 2491 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 CNOT1A5YKK6 2376 aaKnown RBP6.94□□□□□ -1.3
TRIM25-209ENST00000574997 A0A0A0MRY4 1105 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 MYMKA6NI61 221 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 ZNF233A6NK53 670 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 PPEF2O14830 753 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 TRIM66O15016 1216 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 RNF40O75150 1001 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 SOAT2O75908 522 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 ALDH1A2O94788 518 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 NFATC1O95644 943 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 TNNC2P02585 160 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 ITGB3P05106 788 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 HDCP19113 662 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 EIF2DP41214 584 aaKnown RBP6.94□□□□□ -1.3
TRIM25-209ENST00000574997 IFNAR2P48551 515 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 GUCY2FP51841 1108 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 DGKEP52429 567 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 MRPS21P82921 87 aaKnown RBP6.94□□□□□ -1.3
TRIM25-209ENST00000574997 CYP4F8P98187 520 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 TFAMQ00059 246 aaKnown RBP6.94□□□□□ -1.3
TRIM25-209ENST00000574997 DMWDQ09019 674 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 KCNB1Q14721 858 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 DUOXA2Q1HG44 320 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 PLK5Q496M5 336 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 WDR44Q5JSH3 913 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 STPG1Q5TH74 334 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 DAB2IPQ5VWQ8 1189 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 LMBRD2Q68DH5 695 aaPredicted RBP6.94□□□□□ -1.3
TRIM25-209ENST00000574997 TXNDC8Q6A555 127 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 LIMS2Q7Z4I7 341 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 DDX42Q86XP3 938 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRIM25-209ENST00000574997 CCDC65Q8IXS2 484 aa6.94□□□□□ -1.3
TRIM25-209ENST00000574997 GPD1LQ8N335 351 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms