RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 RIN3Q8TB24 985 aa8.89□□□□□ -0.99
APP-216ENST00000491395 ZNF507Q8TCN5 953 aa8.89□□□□□ -0.99
APP-216ENST00000491395 LEO1Q8WVC0 666 aaPredicted RBP8.89□□□□□ -0.99
APP-216ENST00000491395 KBTBD7Q8WVZ9 684 aa8.89□□□□□ -0.99
APP-216ENST00000491395 MRPS31Q92665 395 aaKnown RBP8.89□□□□□ -0.99
APP-216ENST00000491395 CYP2S1Q96SQ9 504 aa8.89□□□□□ -0.99
APP-216ENST00000491395 FAM83CQ9BQN1 747 aa8.89□□□□□ -0.99
APP-216ENST00000491395 FAM126AQ9BYI3 521 aaPredicted RBP8.89□□□□□ -0.99
APP-216ENST00000491395 ABCB6Q9NP58 842 aa8.89□□□□□ -0.99
APP-216ENST00000491395 CRTAC1Q9NQ79 661 aa8.89□□□□□ -0.99
APP-216ENST00000491395 HPS4Q9NQG7 708 aa8.89□□□□□ -0.99
APP-216ENST00000491395 AGPAT3Q9NRZ7 376 aa8.89□□□□□ -0.99
APP-216ENST00000491395 PCDHA7Q9UN72 937 aa8.89□□□□□ -0.99
APP-216ENST00000491395 SMG5Q9UPR3 1016 aaKnown RBP8.89□□□□□ -0.99
APP-216ENST00000491395 R3HCC1Q9Y3T6 440 aaKnown RBP8.89□□□□□ -0.99
APP-216ENST00000491395 NCOR2Q9Y618 2525 aa8.89□□□□□ -0.99
APP-216ENST00000491395 SCN1AP35498 2009 aa8.88□□□□□ -0.99
APP-216ENST00000491395 PDCD11Q14690 1871 aaKnown RBP8.88□□□□□ -0.99
APP-216ENST00000491395 OTOL1A6NHN0 477 aaPredicted RBP8.88□□□□□ -0.99
APP-216ENST00000491395 CLIC2O15247 247 aa8.88□□□□□ -0.99
APP-216ENST00000491395 EIF3DO15371 548 aaKnown RBP eCLIP8.88□□□□□ -0.99
APP-216ENST00000491395 TADA3O75528 432 aa8.88□□□□□ -0.99
APP-216ENST00000491395 CST3P01034 146 aaPredicted RBP8.88□□□□□ -0.99
APP-216ENST00000491395 DLATP10515 647 aaKnown RBP8.88□□□□□ -0.99
APP-216ENST00000491395 ARSAP15289 507 aa8.88□□□□□ -0.99
APP-216ENST00000491395 PCSK1P29120 753 aa8.88□□□□□ -0.99
APP-216ENST00000491395 AFMP43652 599 aa8.88□□□□□ -0.99
APP-216ENST00000491395 CYP2J2P51589 502 aa8.88□□□□□ -0.99
APP-216ENST00000491395 NRLP54845 237 aa8.88□□□□□ -0.99
APP-216ENST00000491395 PSMC1P62191 440 aaKnown RBP8.88□□□□□ -0.99
APP-216ENST00000491395 FOXK2Q01167 660 aa8.88□□□□□ -0.99
APP-216ENST00000491395 EHHADHQ08426 723 aa8.88□□□□□ -0.99
APP-216ENST00000491395 CCINQ13939 588 aa8.88□□□□□ -0.99
APP-216ENST00000491395 PPP2R5DQ14738 602 aa8.88□□□□□ -0.99
APP-216ENST00000491395 SNRNP35Q16560 246 aaKnown RBP8.88□□□□□ -0.99
APP-216ENST00000491395 CNNM4Q6P4Q7 775 aa8.88□□□□□ -0.99
APP-216ENST00000491395 FAM171BQ6P995 826 aa8.88□□□□□ -0.99
APP-216ENST00000491395 C1orf228Q6PIY5 440 aa8.88□□□□□ -0.99
APP-216ENST00000491395 UNC13DQ70J99 1090 aa8.88□□□□□ -0.99
APP-216ENST00000491395 DPH6Q7L8W6 267 aa8.88□□□□□ -0.99
APP-216ENST00000491395 TRAPPC11Q7Z392 1133 aa8.88□□□□□ -0.99
APP-216ENST00000491395 WDR49Q8IV35 697 aa8.88□□□□□ -0.99
APP-216ENST00000491395 SPATA18Q8TC71 538 aa8.88□□□□□ -0.99
APP-216ENST00000491395 SCFD1Q8WVM8 642 aa8.88□□□□□ -0.99
APP-216ENST00000491395 CCDC127Q96BQ5 260 aa8.88□□□□□ -0.99
APP-216ENST00000491395 MSANTD3Q96H12 275 aa8.88□□□□□ -0.99
APP-216ENST00000491395 SLC22A12Q96S37 553 aa8.88□□□□□ -0.99
APP-216ENST00000491395 SYT15Q9BQS2 421 aa8.88□□□□□ -0.99
APP-216ENST00000491395 IER2Q9BTL4 223 aa8.88□□□□□ -0.99
APP-216ENST00000491395 EBF3Q9H4W6 596 aa8.88□□□□□ -0.99
APP-216ENST00000491395 KIAA1586Q9HCI6 787 aa8.88□□□□□ -0.99
APP-216ENST00000491395 TRPC7Q9HCX4 862 aa8.88□□□□□ -0.99
APP-216ENST00000491395 TDP1Q9NUW8 608 aa8.88□□□□□ -0.99
APP-216ENST00000491395 ZMYM5Q9UJ78 669 aa8.88□□□□□ -0.99
APP-216ENST00000491395 SOBPA7XYQ1 873 aa8.87□□□□□ -0.99
APP-216ENST00000491395 K7ESF4 209 aa8.87□□□□□ -0.99
APP-216ENST00000491395 HRO43593 1189 aa8.87□□□□□ -0.99
APP-216ENST00000491395 F13A1P00488 732 aa8.87□□□□□ -0.99
APP-216ENST00000491395 TNNI1P19237 187 aa8.87□□□□□ -0.99
APP-216ENST00000491395 TGM1P22735 817 aa8.87□□□□□ -0.99
APP-216ENST00000491395 WARSP23381 471 aaKnown RBP8.87□□□□□ -0.99
APP-216ENST00000491395 BDNFP23560 247 aa8.87□□□□□ -0.99
APP-216ENST00000491395 DDX6P26196 483 aaKnown RBP eCLIP8.87□□□□□ -0.99
APP-216ENST00000491395 ME1P48163 572 aa8.87□□□□□ -0.99
APP-216ENST00000491395 CYP24A1Q07973 514 aa8.87□□□□□ -0.99
APP-216ENST00000491395 SRSF5Q13243 272 aaKnown RBP8.87□□□□□ -0.99
APP-216ENST00000491395 CUL4BQ13620 913 aa8.87□□□□□ -0.99
APP-216ENST00000491395 RUNX3Q13761 415 aa8.87□□□□□ -0.99
APP-216ENST00000491395 PKP1Q13835 747 aa8.87□□□□□ -0.99
APP-216ENST00000491395 RSPO4Q2I0M5 234 aaPredicted RBP8.87□□□□□ -0.99
APP-216ENST00000491395 CFAP221Q4G0U5 840 aa8.87□□□□□ -0.99
APP-216ENST00000491395 RESP18Q5W5W9 173 aa8.87□□□□□ -0.99
APP-216ENST00000491395 NAIF1Q69YI7 327 aaPredicted RBP8.87□□□□□ -0.99
APP-216ENST00000491395 HEATR6Q6AI08 1181 aaKnown RBP8.87□□□□□ -0.99
APP-216ENST00000491395 FSTL4Q6MZW2 842 aa8.87□□□□□ -0.99
APP-216ENST00000491395 PKN3Q6P5Z2 889 aa8.87□□□□□ -0.99
APP-216ENST00000491395 PRR23BQ6ZRT6 265 aa8.87□□□□□ -0.99
APP-216ENST00000491395 ERMP1Q7Z2K6 904 aa8.87□□□□□ -0.99
APP-216ENST00000491395 HSCBQ8IWL3 235 aa8.87□□□□□ -0.99
APP-216ENST00000491395 GRAMD1CQ8IYS0 662 aa8.87□□□□□ -0.99
APP-216ENST00000491395 XXYLT1Q8NBI6 393 aa8.87□□□□□ -0.99
APP-216ENST00000491395 TTC16Q8NEE8 873 aa8.87□□□□□ -0.99
APP-216ENST00000491395 ZNF516Q92618 1163 aa8.87□□□□□ -0.99
APP-216ENST00000491395 MYLPFQ96A32 169 aa8.87□□□□□ -0.99
APP-216ENST00000491395 CHFRQ96EP1 664 aa8.87□□□□□ -0.99
APP-216ENST00000491395 TRMT2BQ96GJ1 504 aaKnown RBP8.87□□□□□ -0.99
APP-216ENST00000491395 FUBP3Q96I24 572 aaKnown RBP eCLIP8.87□□□□□ -0.99
APP-216ENST00000491395 MYRFLQ96LU7 910 aa8.87□□□□□ -0.99
APP-216ENST00000491395 MMS19Q96T76 1030 aa8.87□□□□□ -0.99
APP-216ENST00000491395 CGRRF1Q99675 332 aa8.87□□□□□ -0.99
APP-216ENST00000491395 MRPL45Q9BRJ2 306 aaKnown RBP8.87□□□□□ -0.99
APP-216ENST00000491395 GZF1Q9H116 711 aaPredicted RBP8.87□□□□□ -0.99
APP-216ENST00000491395 FBRSL1Q9HCM7 1045 aaKnown RBP8.87□□□□□ -0.99
APP-216ENST00000491395 SLC39A2Q9NP94 309 aa8.87□□□□□ -0.99
APP-216ENST00000491395 PARD6AQ9NPB6 346 aa8.87□□□□□ -0.99
APP-216ENST00000491395 MAGEC2Q9UBF1 373 aaPredicted RBP8.87□□□□□ -0.99
APP-216ENST00000491395 CDH9Q9ULB4 789 aa8.87□□□□□ -0.99
APP-216ENST00000491395 NME7Q9Y5B8 376 aa8.87□□□□□ -0.99
APP-216ENST00000491395 SPTBN2O15020 2390 aa8.86□□□□□ -0.99
APP-216ENST00000491395 TRDMT1O14717 391 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms