RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 FAM189BP81408 668 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 TAP2Q03519 686 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 ZNF750Q32MQ0 723 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 PRR16Q569H4 304 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 FBXO38Q6PIJ6 1188 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 GDF7Q7Z4P5 450 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 ATG16L2Q8NAA4 619 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 SPATA5Q8NB90 893 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 CCT6BQ92526 530 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 SNX27Q96L92 541 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 MYLK2Q9H1R3 596 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 MAGEH1Q9H213 219 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 HEYLQ9NQ87 328 aaPredicted RBP7.08□□□□□ -1.28
VPS50-212ENST00000476413 EIF2B4Q9UI10 523 aaKnown RBP7.08□□□□□ -1.28
VPS50-212ENST00000476413 SORCS3Q9UPU3 1222 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 SHOC2Q9UQ13 582 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 CDY1Q9Y6F8 540 aa7.08□□□□□ -1.28
VPS50-212ENST00000476413 A0A0G2JLL6 359 aaPredicted RBP7.07□□□□□ -1.28
VPS50-212ENST00000476413 A0A1W2PS29 197 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 hCG_1984214I3L0E3 225 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 RPS6KA4O75676 772 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 INMTO95050 263 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 GPANK1O95872 356 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 CFIP05156 583 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 EGR1P18146 543 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 KCNA3P22001 575 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 PXNP49023 591 aaPredicted RBP7.07□□□□□ -1.28
VPS50-212ENST00000476413 DGKEP52429 567 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 FSTL1Q12841 308 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 MYO1EQ12965 1108 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 PTK2BQ14289 1009 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 KCNAB1Q14722 419 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 INSCQ1MX18 579 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 ARHGAP15Q53QZ3 475 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 HSP90AB4PQ58FF6 505 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 RAP1GAP2Q684P5 730 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 LIN54Q6MZP7 749 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 TMEM108Q6UXF1 575 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 CPXCR1Q8N123 301 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 FAM71BQ8TC56 605 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 BPIFB1Q8TDL5 484 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 STYXQ8WUJ0 223 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 NACC2Q96BF6 587 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 TMEM120AQ9BXJ8 343 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 SLC46A2Q9BY10 475 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.07□□□□□ -1.28
VPS50-212ENST00000476413 ZNF768Q9H5H4 540 aaKnown RBP7.07□□□□□ -1.28
VPS50-212ENST00000476413 CXorf36Q9H7Y0 433 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 TMEM8AQ9HCN3 771 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 SAGE1Q9NXZ1 904 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 TRPM5Q9NZQ8 1165 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 KCNE5Q9UJ90 142 aa7.07□□□□□ -1.28
VPS50-212ENST00000476413 MRPS17Q9Y2R5 130 aaKnown RBP7.07□□□□□ -1.28
VPS50-212ENST00000476413 PRAMEF33A0A0G2JMD5 474 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 PRAMEF10O60809 474 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 TPH1P17752 444 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 LRPAP1P30533 357 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 FOXO1Q12778 655 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 TOB2Q14106 344 aaPredicted RBP7.06□□□□□ -1.28
VPS50-212ENST00000476413 KRTAP19-4Q3LI73 84 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 MGAT5BQ3V5L5 792 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 TMTC4Q5T4D3 741 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 USP17L6PQ6QN14 398 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 CCDC28AQ8IWP9 274 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 TMEM132CQ8N3T6 1108 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 FAM109AQ8N4B1 249 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 SCLT1Q96NL6 688 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 PCDHAC1Q9H158 963 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 DACT1Q9NYF0 836 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 ZMYND8Q9ULU4 1186 aaPredicted RBP7.06□□□□□ -1.28
VPS50-212ENST00000476413 SCAF8Q9UPN6 1271 aaKnown RBP7.06□□□□□ -1.28
VPS50-212ENST00000476413 NEU2Q9Y3R4 380 aa7.06□□□□□ -1.28
VPS50-212ENST00000476413 SPATA31A3Q5VYP0 1347 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 BTBD11A6QL63 1104 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 TRIM38O00635 465 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 TOR1BO14657 336 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 PPFIA4O75335 1185 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 SOAT2O75908 522 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 SCAF4O95104 1147 aaKnown RBP7.05□□□□□ -1.28
VPS50-212ENST00000476413 TNFRSF6BO95407 300 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 CSF1RP07333 972 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 ITGA5P08648 1049 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 ZFP36P26651 326 aaKnown RBP7.05□□□□□ -1.28
VPS50-212ENST00000476413 MST1P26927 711 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 ATICP31939 592 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 ITGA8P53708 1063 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 CXADRP78310 365 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 KRT17Q04695 432 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 DYRK1AQ13627 763 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 CNGB1Q14028 1251 aaPredicted RBP7.05□□□□□ -1.28
VPS50-212ENST00000476413 MAPKAPK3Q16644 382 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 CYP2A13Q16696 494 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 PTCHD3Q3KNS1 767 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 MANEALQ5VSG8 457 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 CLNKQ7Z7G1 428 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 SMAP1Q8IYB5 467 aaPredicted RBP7.05□□□□□ -1.28
VPS50-212ENST00000476413 ADGRG5Q8IZF4 528 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS50-212ENST00000476413 CCDC150Q8NCX0 1101 aa7.05□□□□□ -1.28
VPS50-212ENST00000476413 STT3BQ8TCJ2 826 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms