RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 I3L4J1 428 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 M0QZQ0 153 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 PPEF2O14830 753 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 DCXO43602 365 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 TBC1D4O60343 1298 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 WEE2P0C1S8 567 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 TAF6P49848 677 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 KLHL30Q0D2K2 578 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 RAB33AQ14088 237 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 MRPL58Q14197 206 aaKnown RBP14.14□□□□□ -0.15
BRAT1-205ENST00000473879 WDR72Q3MJ13 1102 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 TDRD12Q587J7 1177 aaKnown RBP14.14□□□□□ -0.15
BRAT1-205ENST00000473879 WDR59Q6PJI9 974 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 LIMS2Q7Z4I7 341 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 CCDC170Q8IYT3 715 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 TTC39CQ8N584 583 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 KREMEN2Q8NCW0 462 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 SUSD3Q96L08 255 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 GPR88Q9GZN0 384 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 DEF6Q9H4E7 631 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 CYP3A43Q9HB55 503 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 ZDHHC7Q9NXF8 308 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 NXF1Q9UBU9 619 aaKnown RBP14.14□□□□□ -0.15
BRAT1-205ENST00000473879 ZKSCAN5Q9Y2L8 839 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 NR2E1Q9Y466 385 aa14.14□□□□□ -0.15
BRAT1-205ENST00000473879 SSU72P8A0A1W2PR75 194 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 SPTLC1O15269 473 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 ADAM12O43184 909 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 GFPT2O94808 682 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 SPATA31D3P0C874 917 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 PAX3P23760 479 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 ANXA13P27216 316 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 CYLC1P35663 651 aaPredicted RBP14.13□□□□□ -0.15
BRAT1-205ENST00000473879 USP8P40818 1118 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 PRKCIP41743 596 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 ARID5AQ03989 594 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 SCARA3Q6AZY7 606 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 SPATA31D4Q6ZUB0 917 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 VPS36Q86VN1 386 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 FEZF2Q8TBJ5 459 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 KAT5Q92993 513 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 BCO2Q9BYV7 579 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 FBXW11Q9UKB1 542 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 USTQ9Y2C2 406 aa14.13□□□□□ -0.15
BRAT1-205ENST00000473879 SOWAHDA6NJG2 315 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 H7C4K7 107 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 FOXN3O00409 490 aaPredicted RBP14.12□□□□□ -0.15
BRAT1-205ENST00000473879 GPR37L1O60883 481 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 RFPL2O75678 378 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 ZMYND10O75800 440 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 IPO7O95373 1038 aaKnown RBP14.12□□□□□ -0.15
BRAT1-205ENST00000473879 KRT5P13647 590 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 OR1D2P34982 312 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 ASPAP45381 313 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 PDE6CP51160 858 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 BPIFB4P59827 614 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 LILRA4P59901 499 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
BRAT1-205ENST00000473879 VARS2Q5ST30 1063 aaKnown RBP14.12□□□□□ -0.15
BRAT1-205ENST00000473879 E4F1Q66K89 784 aaPredicted RBP14.12□□□□□ -0.15
BRAT1-205ENST00000473879 SLC8B1Q6J4K2 584 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 RSPO2Q6UXX9 243 aaPredicted RBP14.12□□□□□ -0.15
BRAT1-205ENST00000473879 SCARA5Q6ZMJ2 495 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 RTL10Q7L3V2 364 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 FAM71AQ8IYT1 594 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 APPL2Q8NEU8 664 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 ELMO3Q96BJ8 720 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 ZNF707Q96C28 371 aaPredicted RBP14.12□□□□□ -0.15
BRAT1-205ENST00000473879 CCDC42Q96M95 316 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 ARID3AQ99856 593 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 DNAI2Q9GZS0 605 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 NHEJ1Q9H9Q4 299 aaPredicted RBP14.12□□□□□ -0.15
BRAT1-205ENST00000473879 ARHGAP20Q9P2F6 1191 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 PCDHB8Q9UN66 801 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 PCDHB4Q9Y5E5 795 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 CDY1Q9Y6F8 540 aa14.12□□□□□ -0.15
BRAT1-205ENST00000473879 C2CD4DB7Z1M9 353 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 CCP110O43303 1012 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 CYP11A1P05108 521 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 HNRNPA1P09651 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
BRAT1-205ENST00000473879 PNMA6AP0CW24 399 aaPredicted RBP14.11□□□□□ -0.15
BRAT1-205ENST00000473879 MSNP26038 577 aaKnown RBP14.11□□□□□ -0.15
BRAT1-205ENST00000473879 HOXA9P31269 272 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 LIN9Q5TKA1 542 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 HGSNATQ68CP4 663 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 CCDC149Q6ZUS6 474 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 IRF2BP2Q7Z5L9 587 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 ZSCAN30Q86W11 494 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 ZDHHC14Q8IZN3 488 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 PLCD3Q8N3E9 789 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 UBR7Q8N806 425 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 SMG7Q92540 1137 aaKnown RBP14.11□□□□□ -0.15
BRAT1-205ENST00000473879 MMS19Q96T76 1030 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 CHP1Q99653 195 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 PRKD2Q9BZL6 878 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 HAUS4Q9H6D7 363 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 WDR6Q9NNW5 1121 aaKnown RBP14.11□□□□□ -0.15
BRAT1-205ENST00000473879 CISHQ9NSE2 258 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 GDAP2Q9NXN4 497 aa14.11□□□□□ -0.15
BRAT1-205ENST00000473879 MUTYHQ9UIF7 546 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 317.3 ms