RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 LRRIQ3A6PVS8 624 aaPredicted RBP19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 CHADO15335 359 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 VNN1O95497 513 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 C4BPAP04003 597 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 RPN1P04843 607 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 RPS9P46781 194 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 NFIL3Q16649 462 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 ZCWPW2Q504Y3 356 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 WDR44Q5JSH3 913 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 TDRD10Q5VZ19 366 aaKnown RBP19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 ASCL5Q7RTU5 278 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 FSIP1Q8NA03 581 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 RIN3Q8TB24 985 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 FNBP1Q96RU3 617 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 SYT15Q9BQS2 421 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 GDPD2Q9HCC8 539 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 CDH9Q9ULB4 789 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 ATP6V1DQ9Y5K8 247 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 DCHS1Q96JQ0 3298 aa19.26■□□□□ 0.67
TRAPPC3-202ENST00000373162 FAM170BA6NMN3 283 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 SOBPA7XYQ1 873 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 STK25O00506 426 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 EXOC3O60645 756 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 CSH1P0DML2 217 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 CSH2P0DML3 217 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 TNNI1P19237 187 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 MAGEA9P43362 315 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 MYL6P60660 151 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 KCNB1Q14721 858 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 DDR2Q16832 855 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 SDHAF4Q5VUM1 108 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 FRMD5Q7Z6J6 570 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 C1orf210Q8IVY1 113 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 MYLPFQ96A32 169 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 NELL2Q99435 816 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 SLITRK6Q9H5Y7 841 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 TMEM30AQ9NV96 361 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 ZMYM5Q9UJ78 669 aa19.25■□□□□ 0.67
TRAPPC3-202ENST00000373162 SLC38A8A6NNN8 435 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 NR3C1P04150 777 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 ATICP31939 592 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 PSMC1P62191 440 aaKnown RBP19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 RPL10AP62906 217 aaKnown RBP19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 DLG4P78352 724 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 UBXN2BQ14CS0 331 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 ARHGAP15Q53QZ3 475 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 CMTM8Q8IZV2 173 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 NELL1Q92832 810 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 WDR87Q6ZQQ6 2873 aa19.24■□□□□ 0.67
TRAPPC3-202ENST00000373162 HELZP42694 1942 aaKnown RBP19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 ZNF638Q14966 1978 aaKnown RBP19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 ZNF263O14978 683 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 MAPK13O15264 365 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 GFRA3O60609 400 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 ZNF202O95125 648 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 SP9P0CG40 484 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 RFX1P22670 979 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 DDX6P26196 483 aaKnown RBP eCLIP19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 ZACNQ401N2 412 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 ZNF852Q6ZMS4 543 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 MAMSTRQ6ZN01 415 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 GPIHBP1Q8IV16 184 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 FMR1NBQ8N0W7 255 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 GUF1Q8N442 669 aaKnown RBP19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 ENGASEQ8NFI3 743 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 MYCBPAPQ8TBZ2 947 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 FAM200AQ8TCP9 573 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 TMC2Q8TDI7 906 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 CHFRQ96EP1 664 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 PCED1BQ96HM7 432 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 SPATA17Q96L03 361 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 CEP295NLQ96MC4 621 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 PIAS3Q9Y6X2 628 aa19.23■□□□□ 0.67
TRAPPC3-202ENST00000373162 MAN2B1O00754 1011 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 AP3M2P53677 418 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 ZNF268Q14587 947 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 WDR72Q3MJ13 1102 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 ARHGAP29Q52LW3 1261 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 VSTM1Q6UX27 236 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 MON1AQ86VX9 555 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 SPATA2LQ8IUW3 424 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 USP13Q92995 863 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 MSANTD3Q96H12 275 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 TTLL2Q9BWV7 592 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 SMG9Q9H0W8 520 aaKnown RBP19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 SDCBP2Q9H190 292 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 CHRDQ9H2X0 955 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 DPEP3Q9H4B8 488 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 PRMT8Q9NR22 394 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 CCL26Q9Y258 94 aa19.22■□□□□ 0.67
TRAPPC3-202ENST00000373162 CHRNB1P11230 501 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 TDGF1P13385 188 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 CACNA2D1P54289 1103 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 MAPRE1Q15691 268 aaKnown RBP19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 TXNDC8Q6A555 127 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 TXNDC11Q6PKC3 985 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 C4orf50Q6ZRC1 276 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 SPATA20Q8TB22 786 aa19.21■□□□□ 0.67
TRAPPC3-202ENST00000373162 SYAP1Q96A49 352 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms