RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 FAM26FQ5R3K3 315 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 TRIM68Q6AZZ1 485 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 SHC4Q6S5L8 630 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 HSCBQ8IWL3 235 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 CXorf38Q8TB03 319 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 LEO1Q8WVC0 666 aaPredicted RBP20.84■□□□□ 0.93
ITGA4-202ENST00000339307 USP13Q92995 863 aaPredicted RBP20.84■□□□□ 0.93
ITGA4-202ENST00000339307 BLZF1Q9H2G9 400 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 EBF3Q9H4W6 596 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 KIAA1586Q9HCI6 787 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 PTPRJQ12913 1337 aa20.84■□□□□ 0.93
ITGA4-202ENST00000339307 CHURC1-FNTBB4DL54 471 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 CLIC2O15247 247 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 POLR2DO15514 142 aaKnown RBP20.83■□□□□ 0.93
ITGA4-202ENST00000339307 ATP2C2O75185 946 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 YEATS4O95619 227 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 PDGFRBP09619 1106 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 ME1P48163 572 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 FNTBP49356 437 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 PSMC1P62191 440 aaKnown RBP20.83■□□□□ 0.93
ITGA4-202ENST00000339307 CYP27A1Q02318 531 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 MAMSTRQ6ZN01 415 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 SPRYD3Q8NCJ5 442 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 CCDC127Q96BQ5 260 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 FNBP1Q96RU3 617 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 ABCB6Q9NP58 842 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 FAM13BQ9NYF5 915 aa20.83■□□□□ 0.93
ITGA4-202ENST00000339307 EIF3DO15371 548 aaKnown RBP eCLIP20.82■□□□□ 0.92
ITGA4-202ENST00000339307 CASP1P29466 404 aa20.82■□□□□ 0.92
ITGA4-202ENST00000339307 RUNX3Q13761 415 aa20.82■□□□□ 0.92
ITGA4-202ENST00000339307 PUM1Q14671 1186 aaKnown RBP eCLIP20.82■□□□□ 0.92
ITGA4-202ENST00000339307 RSPO4Q2I0M5 234 aaPredicted RBP20.82■□□□□ 0.92
ITGA4-202ENST00000339307 C4orf50Q6ZRC1 276 aa20.82■□□□□ 0.92
ITGA4-202ENST00000339307 MON1AQ86VX9 555 aa20.82■□□□□ 0.92
ITGA4-202ENST00000339307 GPR161Q8N6U8 529 aaKnown RBP20.82■□□□□ 0.92
ITGA4-202ENST00000339307 SYT15Q9BQS2 421 aa20.82■□□□□ 0.92
ITGA4-202ENST00000339307 MAGEC2Q9UBF1 373 aaPredicted RBP20.82■□□□□ 0.92
ITGA4-202ENST00000339307 ZSCAN22P10073 491 aaPredicted RBP20.81■□□□□ 0.92
ITGA4-202ENST00000339307 TDGF1P13385 188 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 LMO2P25791 158 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 HOXD13P35453 343 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 GRIK1P39086 918 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 AFMP43652 599 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 DMWDQ09019 674 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 SIM2Q14190 667 aaPredicted RBP20.81■□□□□ 0.92
ITGA4-202ENST00000339307 SNRNP35Q16560 246 aaKnown RBP20.81■□□□□ 0.92
ITGA4-202ENST00000339307 WDR44Q5JSH3 913 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 DPH6Q7L8W6 267 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 WDR49Q8IV35 697 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 FSIP1Q8NA03 581 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 SPATA18Q8TC71 538 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 ZNF507Q8TCN5 953 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 CYP2S1Q96SQ9 504 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 PKMYT1Q99640 499 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 KIF9Q9HAQ2 790 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 AGPAT3Q9NRZ7 376 aa20.81■□□□□ 0.92
ITGA4-202ENST00000339307 ZNF638Q14966 1978 aaKnown RBP20.81■□□□□ 0.92
ITGA4-202ENST00000339307 KIF26AQ9ULI4 1882 aaPredicted RBP20.81■□□□□ 0.92
ITGA4-202ENST00000339307 GABRDO14764 452 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 NOL4O94818 638 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 CKMP06732 381 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 GRSF1Q12849 480 aaKnown RBP eCLIP20.8■□□□□ 0.92
ITGA4-202ENST00000339307 SRSF5Q13243 272 aaKnown RBP20.8■□□□□ 0.92
ITGA4-202ENST00000339307 CFAP221Q4G0U5 840 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 HS2ST1Q7LGA3 356 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 TRAPPC11Q7Z392 1133 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 MYLPFQ96A32 169 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 FUBP3Q96I24 572 aaKnown RBP eCLIP20.8■□□□□ 0.92
ITGA4-202ENST00000339307 C7orf25Q9BPX7 421 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 SNX25Q9H3E2 840 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 SLC39A2Q9NP94 309 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 CDH9Q9ULB4 789 aa20.8■□□□□ 0.92
ITGA4-202ENST00000339307 TRAV19A0A0A6YYK7 116 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 USP17L7P0C7H9 530 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 ARSAP15289 507 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 BDNFP23560 247 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 ANXA13P27216 316 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 AMPD2Q01433 879 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 UNC13DQ70J99 1090 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 EPM2AIP1Q7L775 607 aaPredicted RBP20.79■□□□□ 0.92
ITGA4-202ENST00000339307 XXYLT1Q8NBI6 393 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 OR6B3Q8NGW1 331 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 SNX21Q969T3 373 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 TRMT2BQ96GJ1 504 aaKnown RBP20.79■□□□□ 0.92
ITGA4-202ENST00000339307 FAM83CQ9BQN1 747 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 HPS4Q9NQG7 708 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 C2orf42Q9NWW7 574 aa20.79■□□□□ 0.92
ITGA4-202ENST00000339307 TGFB1I1O43294 461 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 F13A1P00488 732 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 TNNC1P63316 161 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 SPEM2Q0P670 501 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 TRPC3Q13507 836 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 CCINQ13939 588 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 MAPRE1Q15691 268 aaKnown RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 FAM171BQ6P995 826 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 CEP68Q76N32 757 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.78■□□□□ 0.92
ITGA4-202ENST00000339307 LONP2Q86WA8 852 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 CEP57L1Q8IYX8 460 aa20.78■□□□□ 0.92
ITGA4-202ENST00000339307 SYNPOQ8N3V7 929 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms