RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YDL121CQ07541 149 aa-4.33□□□□□ -3.1
snR40snR40 TY1B-BLQ12490 1755 aa-4.34□□□□□ -3.1
snR40snR40 ARG80P07249 177 aa-4.34□□□□□ -3.1
snR40snR40 YHR213WP0CI67 198 aa-4.34□□□□□ -3.1
snR40snR40 GCV3P39726 170 aaPredicted RBP-4.34□□□□□ -3.1
snR40snR40 NQM1P53228 333 aaPredicted RBP-4.34□□□□□ -3.1
snR40snR40 HHO1P53551 258 aa-4.34□□□□□ -3.1
snR40snR40 LSM7P53905 115 aaKnown RBP-4.34□□□□□ -3.1
snR40snR40 YMR315WQ04869 349 aaKnown RBP-4.34□□□□□ -3.1
snR40snR40 YLR036CQ07986 203 aa-4.34□□□□□ -3.1
snR40snR40 PGC1Q08959 321 aa-4.34□□□□□ -3.1
snR40snR40 NTF2P33331 125 aaKnown RBP-4.35□□□□□ -3.11
snR40snR40 UTP11P34247 250 aaPredicted RBP-4.35□□□□□ -3.11
snR40snR40 YEL073CP39974 107 aa-4.35□□□□□ -3.11
snR40snR40 OCA6Q12454 224 aa-4.35□□□□□ -3.11
snR40snR40 RPL40AP0CH08 128 aaKnown RBP-4.36□□□□□ -3.11
snR40snR40 RPL40BP0CH09 128 aaKnown RBP-4.36□□□□□ -3.11
snR40snR40 CNB1P25296 175 aa-4.36□□□□□ -3.11
snR40snR40 TDA4P47153 279 aa-4.36□□□□□ -3.11
snR40snR40 COX2P00410 251 aa-4.37□□□□□ -3.11
snR40snR40 ERV41Q04651 352 aa-4.37□□□□□ -3.11
snR40snR40 YGR240C-AQ3E786 66 aa-4.37□□□□□ -3.11
snR40snR40 NHP6AP11632 93 aaKnown RBP-4.38□□□□□ -3.11
snR40snR40 FMP16Q12497 93 aa-4.38□□□□□ -3.11
snR40snR40 MMS2P53152 137 aa-4.39□□□□□ -3.11
snR40snR40 RFU1Q08003 200 aa-4.39□□□□□ -3.11
snR40snR40 YRF1-2P40105 1681 aa-4.39□□□□□ -3.11
snR40snR40 ADE6P38972 1358 aaKnown RBP-4.4□□□□□ -3.11
snR40snR40 LIA1P47120 325 aaKnown RBP-4.4□□□□□ -3.11
snR40snR40 BRR6P53062 197 aa-4.4□□□□□ -3.11
snR40snR40 PLP1Q04004 230 aa-4.4□□□□□ -3.11
snR40snR40 YLR412C-AQ3E742 68 aa-4.4□□□□□ -3.11
snR40snR40 GCD2P12754 651 aaPredicted RBP-4.41□□□□□ -3.12
snR40snR40 ANB1P19211 157 aa-4.41□□□□□ -3.12
snR40snR40 JNM1P36224 373 aa-4.41□□□□□ -3.12
snR40snR40 HPM1P40481 377 aa-4.41□□□□□ -3.12
snR40snR40 FYV6P53913 173 aa-4.41□□□□□ -3.12
snR40snR40 HPA2Q06592 156 aa-4.41□□□□□ -3.12
snR40snR40 UIP4Q08926 304 aa-4.41□□□□□ -3.12
snR40snR40 ENV10Q99382 181 aa-4.41□□□□□ -3.12
snR40snR40 ADK1P07170 222 aaKnown RBP-4.42□□□□□ -3.12
snR40snR40 FYV4P38783 130 aaPredicted RBP-4.42□□□□□ -3.12
snR40snR40 AIM18P38884 321 aa-4.42□□□□□ -3.12
snR40snR40 HOC1P47124 396 aa-4.42□□□□□ -3.12
snR40snR40 YNR064CP53750 290 aa-4.42□□□□□ -3.12
snR40snR40 YMR001C-AQ8TGS9 76 aa-4.42□□□□□ -3.12
snR40snR40 PFY1P07274 126 aa-4.43□□□□□ -3.12
snR40snR40 FES1P38260 290 aa-4.43□□□□□ -3.12
snR40snR40 SPG1P50088 95 aa-4.43□□□□□ -3.12
snR40snR40 YPR153WQ06537 140 aa-4.43□□□□□ -3.12
snR40snR40 YGL041W-AP0C5N3 154 aa-4.44□□□□□ -3.12
snR40snR40 FMP23P38231 175 aa-4.44□□□□□ -3.12
snR40snR40 CUE1P38428 203 aa-4.44□□□□□ -3.12
snR40snR40 IRC19Q07843 230 aa-4.44□□□□□ -3.12
snR40snR40 PRS3P38689 320 aaKnown RBP-4.45□□□□□ -3.12
snR40snR40 BNA6P43619 295 aa-4.45□□□□□ -3.12
snR40snR40 HOP2P53187 214 aa-4.45□□□□□ -3.12
snR40snR40 BPH1P25356 2167 aa-4.46□□□□□ -3.12
snR40snR40 RAD9P14737 1309 aa-4.46□□□□□ -3.12
snR40snR40 SRL4Q03085 281 aa-4.46□□□□□ -3.12
snR40snR40 SDO1Q07953 250 aaKnown RBP-4.46□□□□□ -3.12
snR40snR40 YLR031WQ07978 186 aa-4.46□□□□□ -3.12
snR40snR40 TMA22P47089 198 aaPredicted RBP-4.47□□□□□ -3.13
snR40snR40 LIP1Q03579 150 aa-4.47□□□□□ -3.13
snR40snR40 ATP14Q12349 124 aa-4.47□□□□□ -3.13
snR40snR40 HUT1Q12520 339 aa-4.47□□□□□ -3.13
snR40snR40 RAD6P06104 172 aa-4.48□□□□□ -3.13
snR40snR40 YNL200CP40165 246 aaKnown RBP-4.48□□□□□ -3.13
snR40snR40 YIL163CP40448 117 aa-4.48□□□□□ -3.13
snR40snR40 RCF2P53721 224 aa-4.48□□□□□ -3.13
snR40snR40 MGR3Q04472 501 aa-4.48□□□□□ -3.13
snR40snR40 COX20Q04935 205 aa-4.48□□□□□ -3.13
snR40snR40 YPR114WQ06107 315 aa-4.48□□□□□ -3.13
snR40snR40 RPS11AP0CX47 156 aaKnown RBP-4.49□□□□□ -3.13
snR40snR40 RPS11BP0CX48 156 aaKnown RBP-4.49□□□□□ -3.13
snR40snR40 SPS18P32572 300 aa-4.49□□□□□ -3.13
snR40snR40 CPR5P35176 225 aa-4.49□□□□□ -3.13
snR40snR40 MDM32Q12171 622 aa-4.49□□□□□ -3.13
snR40snR40 POL30P15873 258 aaKnown RBP-4.5□□□□□ -3.13
snR40snR40 RPC10P40422 70 aa-4.5□□□□□ -3.13
snR40snR40 YGR025WP53216 100 aa-4.5□□□□□ -3.13
snR40snR40 RAV2Q03956 351 aa-4.5□□□□□ -3.13
snR40snR40 LDB18Q07887 179 aa-4.5□□□□□ -3.13
snR40snR40 SNT2P53127 1403 aa-4.5□□□□□ -3.13
snR40snR40 YBL044WP38194 122 aa-4.51□□□□□ -3.13
snR40snR40 MER1P16523 270 aa-4.52□□□□□ -3.13
snR40snR40 YEL028WP39989 153 aa-4.52□□□□□ -3.13
snR40snR40 RTT105P40063 208 aa-4.52□□□□□ -3.13
snR40snR40 VMA10P48836 114 aaKnown RBP-4.52□□□□□ -3.13
snR40snR40 YOR214CQ12282 236 aa-4.52□□□□□ -3.13
snR40snR40 TRM3Q07527 1436 aa-4.53□□□□□ -3.13
snR40snR40 RPS28BP0C0X0 67 aaKnown RBP-4.53□□□□□ -3.13
snR40snR40 YJR107C-AP0CT86 78 aa-4.53□□□□□ -3.13
snR40snR40 MRPL25P23369 157 aa-4.53□□□□□ -3.13
snR40snR40 GPI2P46961 280 aa-4.53□□□□□ -3.13
snR40snR40 RPS28AQ3E7X9 67 aaPredicted RBP-4.53□□□□□ -3.13
snR40snR40 ECM5Q03214 1411 aa-4.54□□□□□ -3.14
snR40snR40 YLR296WQ05898 108 aa-4.54□□□□□ -3.14
snR40snR40 MRPL38P35996 138 aaPredicted RBP-4.55□□□□□ -3.14
snR40snR40 SHU1P38751 150 aa-4.55□□□□□ -3.14
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms