RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W YDL241WQ07738 123 aa2.13□□□□□ -2.07
HSH49YOR319W RFU1Q08003 200 aa2.13□□□□□ -2.07
HSH49YOR319W ATP14Q12349 124 aa2.13□□□□□ -2.07
HSH49YOR319W RPS25BP0C0T4 108 aaKnown RBP2.12□□□□□ -2.07
HSH49YOR319W FPR1P20081 114 aaKnown RBP2.12□□□□□ -2.07
HSH49YOR319W SUA7P29055 345 aaPredicted RBP2.12□□□□□ -2.07
HSH49YOR319W ETR1P38071 380 aa2.12□□□□□ -2.07
HSH49YOR319W FMN1Q03778 218 aa2.12□□□□□ -2.07
HSH49YOR319W RPS25AQ3E792 108 aaPredicted RBP2.12□□□□□ -2.07
HSH49YOR319W UBR1P19812 1950 aa2.12□□□□□ -2.07
HSH49YOR319W RCF2P53721 224 aa2.11□□□□□ -2.07
HSH49YOR319W NMA1Q06178 401 aaKnown RBP2.11□□□□□ -2.07
HSH49YOR319W SPC3Q12133 184 aa2.11□□□□□ -2.07
HSH49YOR319W YLR361C-AQ3E795 98 aa2.11□□□□□ -2.07
HSH49YOR319W KEI1Q06346 221 aa2.1□□□□□ -2.07
HSH49YOR319W UBR2Q07963 1872 aa2.09□□□□□ -2.07
HSH49YOR319W YGL041W-AP0C5N3 154 aa2.09□□□□□ -2.07
HSH49YOR319W PRS3P38689 320 aaKnown RBP2.09□□□□□ -2.07
HSH49YOR319W YEL008WP40001 126 aa2.09□□□□□ -2.07
HSH49YOR319W YNL019CP53975 284 aa2.09□□□□□ -2.07
HSH49YOR319W DYN2Q02647 92 aa2.09□□□□□ -2.07
HSH49YOR319W IRC19Q07843 230 aa2.09□□□□□ -2.07
HSH49YOR319W TAR1Q8TGM6 124 aa2.09□□□□□ -2.07
HSH49YOR319W YHR140WP38842 239 aa2.08□□□□□ -2.08
HSH49YOR319W APS3P47064 194 aa2.08□□□□□ -2.08
HSH49YOR319W GLC8P41818 229 aa2.07□□□□□ -2.08
HSH49YOR319W YFL065CP43539 102 aa2.07□□□□□ -2.08
HSH49YOR319W SPG1P50088 95 aa2.07□□□□□ -2.08
HSH49YOR319W YGR017WP53210 297 aa2.07□□□□□ -2.08
HSH49YOR319W CNL1Q06333 122 aa2.07□□□□□ -2.08
HSH49YOR319W FMP49A0A023PZB3 126 aa2.06□□□□□ -2.08
HSH49YOR319W RPL14AP36105 138 aaKnown RBP2.06□□□□□ -2.08
HSH49YOR319W RPL14BP38754 138 aaKnown RBP2.06□□□□□ -2.08
HSH49YOR319W VMA10P48836 114 aaKnown RBP2.06□□□□□ -2.08
HSH49YOR319W EMC4P53073 190 aa2.06□□□□□ -2.08
HSH49YOR319W TIM8P57744 87 aa2.06□□□□□ -2.08
HSH49YOR319W YDR278CQ05612 105 aa2.06□□□□□ -2.08
HSH49YOR319W FCY1Q12178 158 aa2.06□□□□□ -2.08
HSH49YOR319W COA3Q3E7B2 85 aa2.06□□□□□ -2.08
HSH49YOR319W RIF1P29539 1916 aa2.06□□□□□ -2.08
HSH49YOR319W YCL042WP25572 119 aa2.05□□□□□ -2.08
HSH49YOR319W RPS20P38701 121 aaKnown RBP2.05□□□□□ -2.08
HSH49YOR319W LSM8P47093 109 aaKnown RBP2.05□□□□□ -2.08
HSH49YOR319W YGL230CP53074 147 aa2.05□□□□□ -2.08
HSH49YOR319W AVO2Q04749 426 aa2.05□□□□□ -2.08
HSH49YOR319W BEM2P39960 2167 aaKnown RBP2.05□□□□□ -2.08
HSH49YOR319W HYM1P32464 399 aa2.04□□□□□ -2.08
HSH49YOR319W ECM31P38122 312 aa2.04□□□□□ -2.08
HSH49YOR319W YBR242WP38331 238 aa2.04□□□□□ -2.08
HSH49YOR319W YEL014CP39999 101 aa2.04□□□□□ -2.08
HSH49YOR319W ELC1Q03071 99 aa2.04□□□□□ -2.08
HSH49YOR319W NHP6AP11632 93 aaKnown RBP2.03□□□□□ -2.08
HSH49YOR319W HPM1P40481 377 aa2.03□□□□□ -2.08
HSH49YOR319W DIE2P50076 525 aa2.03□□□□□ -2.08
HSH49YOR319W YPR153WQ06537 140 aa2.03□□□□□ -2.08
HSH49YOR319W CMC4Q3E7A9 73 aa2.03□□□□□ -2.08
HSH49YOR319W YNL277W-AQ3E7Z0 62 aa2.03□□□□□ -2.08
HSH49YOR319W ACC1Q00955 2233 aaKnown RBP2.02□□□□□ -2.09
HSH49YOR319W RAD50P12753 1312 aa2.02□□□□□ -2.09
HSH49YOR319W COX5BP00425 151 aa2.02□□□□□ -2.09
HSH49YOR319W PRE1P22141 198 aaKnown RBP2.02□□□□□ -2.09
HSH49YOR319W RPS1BP23248 255 aaKnown RBP2.02□□□□□ -2.09
HSH49YOR319W TRS20P38334 175 aa2.02□□□□□ -2.09
HSH49YOR319W YCL001W-AP87012 153 aa2.02□□□□□ -2.09
HSH49YOR319W NKP2Q06162 153 aa2.02□□□□□ -2.09
HSH49YOR319W HUT1Q12520 339 aa2.02□□□□□ -2.09
HSH49YOR319W KIN28P06242 306 aa2.01□□□□□ -2.09
HSH49YOR319W FYV5P25585 152 aa2.01□□□□□ -2.09
HSH49YOR319W SOM1Q05676 74 aa2.01□□□□□ -2.09
HSH49YOR319W MRP49P32388 137 aa2□□□□□ -2.09
HSH49YOR319W MRPL15P36523 253 aa2□□□□□ -2.09
HSH49YOR319W IPT1P38954 527 aa2□□□□□ -2.09
HSH49YOR319W RAF1Q06891 181 aa2□□□□□ -2.09
HSH49YOR319W Q0144Q9ZZW2 109 aa2□□□□□ -2.09
HSH49YOR319W HSP150P32478 413 aa1.99□□□□□ -2.09
HSH49YOR319W TMA23Q03525 211 aa1.99□□□□□ -2.09
HSH49YOR319W TVP18Q04767 167 aa1.99□□□□□ -2.09
HSH49YOR319W GPI11Q06636 219 aa1.99□□□□□ -2.09
HSH49YOR319W YOR385WQ08909 290 aa1.99□□□□□ -2.09
HSH49YOR319W DDP1Q99321 188 aaKnown RBP1.99□□□□□ -2.09
HSH49YOR319W AQY2P0CD90 149 aa1.98□□□□□ -2.09
HSH49YOR319W YCR050CP25630 102 aa1.98□□□□□ -2.09
HSH49YOR319W RPS1AP33442 255 aaKnown RBP1.98□□□□□ -2.09
HSH49YOR319W SDH7Q04401 133 aa1.98□□□□□ -2.09
HSH49YOR319W FIT1Q04433 528 aa1.98□□□□□ -2.09
HSH49YOR319W SLO1Q3E784 85 aa1.98□□□□□ -2.09
HSH49YOR319W YHR212W-AP0CX91 67 aa1.97□□□□□ -2.09
HSH49YOR319W HYP2P23301 157 aaKnown RBP1.97□□□□□ -2.09
HSH49YOR319W YKR070WP36151 352 aaKnown RBP1.97□□□□□ -2.09
HSH49YOR319W PHS1P40857 217 aa1.97□□□□□ -2.09
HSH49YOR319W SFT1P43682 97 aa1.97□□□□□ -2.09
HSH49YOR319W YPR203WQ08994 102 aa1.97□□□□□ -2.09
HSH49YOR319W VAR1P02381 398 aa1.96□□□□□ -2.1
HSH49YOR319W MRPL44P19956 98 aa1.96□□□□□ -2.1
HSH49YOR319W VMA7P39111 118 aa1.96□□□□□ -2.1
HSH49YOR319W YAL064WP39711 94 aa1.96□□□□□ -2.1
HSH49YOR319W VAM10Q08474 114 aa1.96□□□□□ -2.1
HSH49YOR319W NAT5Q08689 176 aa1.96□□□□□ -2.1
HSH49YOR319W MYO2P19524 1574 aaKnown RBP1.95□□□□□ -2.1
HSH49YOR319W FRQ1Q06389 190 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms