RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W YNR077CP53758 84 aa2.73□□□□□ -1.97
VPS27YNR006W VPS28Q02767 242 aa2.73□□□□□ -1.97
VPS27YNR006W YMR253CQ04835 414 aa2.73□□□□□ -1.97
VPS27YNR006W FCY1Q12178 158 aa2.73□□□□□ -1.97
VPS27YNR006W TY1B-NL2Q99337 1749 aaKnown RBP2.73□□□□□ -1.97
VPS27YNR006W CUP9P41817 306 aa2.73□□□□□ -1.97
VPS27YNR006W YNL033WP53964 284 aa2.73□□□□□ -1.97
VPS27YNR006W YNL019CP53975 284 aa2.73□□□□□ -1.97
VPS27YNR006W BUD25P85052 153 aa2.73□□□□□ -1.97
VPS27YNR006W SNF2P22082 1703 aa2.72□□□□□ -1.97
VPS27YNR006W RAD6P06104 172 aa2.72□□□□□ -1.97
VPS27YNR006W KIN28P06242 306 aa2.72□□□□□ -1.97
VPS27YNR006W ADK1P07170 222 aaKnown RBP2.72□□□□□ -1.97
VPS27YNR006W FZF1P32805 299 aa2.72□□□□□ -1.97
VPS27YNR006W LHP1P33399 275 aaKnown RBP2.72□□□□□ -1.97
VPS27YNR006W PAM17P36147 197 aa2.72□□□□□ -1.97
VPS27YNR006W YKR070WP36151 352 aaKnown RBP2.72□□□□□ -1.97
VPS27YNR006W AYR1P40471 297 aa2.72□□□□□ -1.97
VPS27YNR006W EST3Q03096 181 aa2.72□□□□□ -1.97
VPS27YNR006W ANT1Q06497 328 aa2.72□□□□□ -1.97
VPS27YNR006W FEX1Q08913 375 aa2.72□□□□□ -1.97
VPS27YNR006W FEX2Q08991 375 aa2.72□□□□□ -1.97
VPS27YNR006W YNL277W-AQ3E7Z0 62 aa2.72□□□□□ -1.97
VPS27YNR006W DDR48P18899 430 aaKnown RBP2.71□□□□□ -1.98
VPS27YNR006W HSP12P22943 109 aaKnown RBP2.71□□□□□ -1.98
VPS27YNR006W AHT1P29589 182 aa2.71□□□□□ -1.98
VPS27YNR006W SCM4P32564 187 aa2.71□□□□□ -1.98
VPS27YNR006W SUI1P32911 108 aaKnown RBP2.71□□□□□ -1.98
VPS27YNR006W SFT1P43682 97 aa2.71□□□□□ -1.98
VPS27YNR006W YJL027CP47063 138 aaPredicted RBP2.71□□□□□ -1.98
VPS27YNR006W YMR295CQ03559 197 aa2.71□□□□□ -1.98
VPS27YNR006W SHH3Q04487 196 aa2.71□□□□□ -1.98
VPS27YNR006W YIR021W-AQ3E739 70 aa2.71□□□□□ -1.98
VPS27YNR006W TY4B-HP0C2J7 1802 aa2.71□□□□□ -1.98
VPS27YNR006W DUR1,2P32528 1835 aaKnown RBP2.71□□□□□ -1.98
VPS27YNR006W TY4B-JP47024 1803 aa2.71□□□□□ -1.98
VPS27YNR006W MRS4P23500 304 aa2.71□□□□□ -1.98
VPS27YNR006W TFC1P32367 649 aa2.71□□□□□ -1.98
VPS27YNR006W YIL059CP40520 121 aa2.71□□□□□ -1.98
VPS27YNR006W APS2Q00381 147 aa2.71□□□□□ -1.98
VPS27YNR006W LDB18Q07887 179 aa2.71□□□□□ -1.98
VPS27YNR006W YOR381W-AQ3E804 55 aa2.71□□□□□ -1.98
VPS27YNR006W YGR017WP53210 297 aa2.7□□□□□ -1.98
VPS27YNR006W YDR391CQ04170 232 aa2.7□□□□□ -1.98
VPS27YNR006W YLR118CQ12354 227 aa2.7□□□□□ -1.98
VPS27YNR006W AGA2P32781 87 aa2.69□□□□□ -1.98
VPS27YNR006W YET1P35723 206 aa2.69□□□□□ -1.98
VPS27YNR006W YER135CP40082 130 aa2.69□□□□□ -1.98
VPS27YNR006W YNR064CP53750 290 aa2.69□□□□□ -1.98
VPS27YNR006W IRC23Q08416 157 aa2.69□□□□□ -1.98
VPS27YNR006W BOL1Q3E793 110 aa2.69□□□□□ -1.98
VPS27YNR006W RRP5Q05022 1729 aaKnown RBP2.69□□□□□ -1.98
VPS27YNR006W RPL26AP05743 127 aaKnown RBP2.69□□□□□ -1.98
VPS27YNR006W YOL162WP0CF19 215 aa2.69□□□□□ -1.98
VPS27YNR006W KRE1P17260 313 aa2.69□□□□□ -1.98
VPS27YNR006W YEL073CP39974 107 aa2.69□□□□□ -1.98
VPS27YNR006W YNL217WP40152 326 aa2.69□□□□□ -1.98
VPS27YNR006W RPL33BP41056 107 aaKnown RBP2.69□□□□□ -1.98
VPS27YNR006W ALB1P47019 175 aaPredicted RBP2.69□□□□□ -1.98
VPS27YNR006W YJR146WP47174 117 aa2.69□□□□□ -1.98
VPS27YNR006W BOL2P53082 120 aa2.69□□□□□ -1.98
VPS27YNR006W RPL26BP53221 127 aaKnown RBP2.69□□□□□ -1.98
VPS27YNR006W TVP18Q04767 167 aa2.69□□□□□ -1.98
VPS27YNR006W YPR114WQ06107 315 aa2.69□□□□□ -1.98
VPS27YNR006W ATG40Q99325 256 aa2.69□□□□□ -1.98
VPS27YNR006W YBL010CP32788 280 aa2.68□□□□□ -1.98
VPS27YNR006W GEP7P53171 287 aa2.68□□□□□ -1.98
VPS27YNR006W GIS2P53849 153 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
VPS27YNR006W YDR114CQ04597 100 aa2.68□□□□□ -1.98
VPS27YNR006W APC1P53886 1748 aa2.67□□□□□ -1.98
VPS27YNR006W SOD1P00445 154 aaKnown RBP2.67□□□□□ -1.98
VPS27YNR006W LIP1Q03579 150 aa2.67□□□□□ -1.98
VPS27YNR006W RIM9Q04734 239 aa2.67□□□□□ -1.98
VPS27YNR006W RNH202Q05635 350 aa2.67□□□□□ -1.98
VPS27YNR006W URB1P34241 1764 aaKnown RBP2.67□□□□□ -1.98
VPS27YNR006W HAP1P0CE41 1502 aa2.67□□□□□ -1.98
VPS27YNR006W GSP1P32835 219 aaKnown RBP2.67□□□□□ -1.98
VPS27YNR006W GSP2P32836 220 aaKnown RBP2.67□□□□□ -1.98
VPS27YNR006W RIO2P40160 425 aaKnown RBP2.67□□□□□ -1.98
VPS27YNR006W YCR101CP25607 182 aa2.66□□□□□ -1.98
VPS27YNR006W MIG1P27705 504 aa2.66□□□□□ -1.98
VPS27YNR006W UTP11P34247 250 aaPredicted RBP2.66□□□□□ -1.98
VPS27YNR006W YPT31P38555 223 aaKnown RBP2.66□□□□□ -1.98
VPS27YNR006W TIR3P40552 269 aa2.66□□□□□ -1.98
VPS27YNR006W YIR035CP40579 254 aa2.66□□□□□ -1.98
VPS27YNR006W AIM11P87275 137 aa2.66□□□□□ -1.98
VPS27YNR006W AIM36Q03798 255 aa2.66□□□□□ -1.98
VPS27YNR006W CSI2Q08054 341 aa2.66□□□□□ -1.98
VPS27YNR006W YOR015WQ12169 119 aa2.66□□□□□ -1.98
VPS27YNR006W FKS3Q04952 1785 aa2.65□□□□□ -1.98
VPS27YNR006W YLR236CA0A023PZG4 107 aa2.65□□□□□ -1.98
VPS27YNR006W NOP1P15646 327 aaKnown RBP2.65□□□□□ -1.98
VPS27YNR006W TVP23P38962 199 aa2.65□□□□□ -1.98
VPS27YNR006W RGI1P40043 161 aaPredicted RBP2.65□□□□□ -1.98
VPS27YNR006W PAC10P48363 199 aa2.65□□□□□ -1.98
VPS27YNR006W ELC1Q03071 99 aa2.65□□□□□ -1.98
VPS27YNR006W ATG10Q07879 167 aa2.65□□□□□ -1.98
VPS27YNR006W DDI2P0CH63 225 aa2.65□□□□□ -1.99
VPS27YNR006W DDI3P0CH64 225 aa2.65□□□□□ -1.99
VPS27YNR006W EMC4P53073 190 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms