RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	SUA7	P29055	345 aa	Predicted RBP	1.01	□□□□□ -2.25
PKR1	YMR123W	ATP7	P30902	174 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	NTG1	P31378	399 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	ASF2	P32448	525 aa	Predicted RBP	1.01	□□□□□ -2.25
PKR1	YMR123W	APS1	P35181	156 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	SRP102	P36057	244 aa	Predicted RBP	1.01	□□□□□ -2.25
PKR1	YMR123W	RPS20	P38701	121 aa	Known RBP	1.01	□□□□□ -2.25
PKR1	YMR123W	MPM1	P40364	252 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	TIR3	P40552	269 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	GET1	P53192	235 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	YNL033W	P53964	284 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	YNL019C	P53975	284 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	YPL067C	Q02754	198 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	YMD8	Q03697	442 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	GPI11	Q06636	219 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	RFU1	Q08003	200 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	MHF2	Q3E829	80 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	YMR105W-A	Q8TGS8	64 aa		1.01	□□□□□ -2.25
PKR1	YMR123W	SEC4	P07560	215 aa	Known RBP	1	□□□□□ -2.25
PKR1	YMR123W	PHO85	P17157	305 aa		1	□□□□□ -2.25
PKR1	YMR123W	ATG22	P25568	528 aa		1	□□□□□ -2.25
PKR1	YMR123W	TFC1	P32367	649 aa		1	□□□□□ -2.25
PKR1	YMR123W	AUA1	P32450	94 aa		1	□□□□□ -2.25
PKR1	YMR123W	SPS18	P32572	300 aa		1	□□□□□ -2.25
PKR1	YMR123W	TRM5	P38793	499 aa		1	□□□□□ -2.25
PKR1	YMR123W	IPT1	P38954	527 aa		1	□□□□□ -2.25
PKR1	YMR123W	PGD1	P40356	397 aa		1	□□□□□ -2.25
PKR1	YMR123W	DOC1	P53068	250 aa		1	□□□□□ -2.25
PKR1	YMR123W	YGL101W	P53144	215 aa		1	□□□□□ -2.25
PKR1	YMR123W	PRM8	P53174	237 aa		1	□□□□□ -2.25
PKR1	YMR123W	PGA1	P53896	198 aa		1	□□□□□ -2.25
PKR1	YMR123W	DID2	P69771	204 aa		1	□□□□□ -2.25
PKR1	YMR123W	YKR005C	Q02203	525 aa		1	□□□□□ -2.25
PKR1	YMR123W	AIM36	Q03798	255 aa		1	□□□□□ -2.25
PKR1	YMR123W	ELP6	Q04868	273 aa		1	□□□□□ -2.25
PKR1	YMR123W	SNF4	P12904	322 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	RPL30	P14120	105 aa	Known RBP	0.99	□□□□□ -2.25
PKR1	YMR123W	SKG1	P36169	355 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	FAR7	P43592	221 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	XPT1	P47165	209 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	NQM1	P53228	333 aa	Predicted RBP	0.99	□□□□□ -2.25
PKR1	YMR123W	YGR050C	P53231	118 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	SAY1	P53324	424 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	NRK1	P53915	240 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	SNZ1	Q03148	297 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	GAL83	Q04739	417 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	HOR7	Q05827	59 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	FCY1	Q12178	158 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	MPD1	Q12404	318 aa	Known RBP	0.99	□□□□□ -2.25
PKR1	YMR123W	ADF1	Q2V2Q1	113 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	LSO2	Q3E772	92 aa	Known RBP	0.99	□□□□□ -2.25
PKR1	YMR123W	YKL068W-A	Q3E826	78 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	YFR032C-B	Q8TGU2	87 aa		0.99	□□□□□ -2.25
PKR1	YMR123W	YHR212W-A	P0CX91	67 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	RFA3	P26755	122 aa	Known RBP	0.98	□□□□□ -2.25
PKR1	YMR123W	FZF1	P32805	299 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	TMA19	P35691	167 aa	Known RBP	0.98	□□□□□ -2.25
PKR1	YMR123W	DLS1	P40366	167 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	TMA22	P47089	198 aa	Predicted RBP	0.98	□□□□□ -2.25
PKR1	YMR123W	VPS55	P47111	140 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	TTI2	P47168	421 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	CCC1	P47818	322 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	PDR17	P53844	350 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	HHT1	P61830	136 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	SPC2	Q04969	178 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	UPS1	Q05776	175 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	YOL160W	Q08321	113 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	YPL162C	Q12042	273 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	HUT1	Q12520	339 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	RIB3	Q99258	208 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	ATG40	Q99325	256 aa		0.98	□□□□□ -2.25
PKR1	YMR123W	RPL25	P04456	142 aa	Known RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	ADK1	P07170	222 aa	Known RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	MRS4	P23500	304 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	UBC8	P28263	218 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	YBL010C	P32788	280 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	ECM4	P36156	370 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	SRL3	P36167	246 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	PDX3	P38075	228 aa	Known RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	ECM31	P38122	312 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	RIO2	P40160	425 aa	Known RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	ERJ5	P43613	295 aa	Predicted RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	HSK3	P69852	69 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	YMR315W	Q04869	349 aa	Known RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	YMR226C	Q05016	267 aa	Known RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	NOC4	Q06512	552 aa	Predicted RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	YNG1	Q08465	219 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	PRM3	Q08931	133 aa		0.97	□□□□□ -2.25
PKR1	YMR123W	YOR289W	Q12012	251 aa	Predicted RBP	0.97	□□□□□ -2.25
PKR1	YMR123W	YGL041W-A	P0C5N3	154 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	GCN3	P14741	305 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	STF2	P16965	84 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	HYM1	P32464	399 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	YBR285W	P38354	144 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	YNL217W	P40152	326 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	PAM16	P42949	149 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	LSM7	P53905	115 aa	Known RBP	0.96	□□□□□ -2.26
PKR1	YMR123W	YDR274C	P87283	123 aa		0.96	□□□□□ -2.26
PKR1	YMR123W	RRP17	Q04031	235 aa	Predicted RBP	0.96	□□□□□ -2.26
PKR1	YMR123W	YHP1	Q04116	353 aa		0.96	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms